RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 FEM1BQ9UK73 627 aa14.79□□□□□ -0.04
SPAST-201ENST00000315285 FTLP02792 175 aaPredicted RBP14.78□□□□□ -0.04
SPAST-201ENST00000315285 SERPINB6P35237 376 aa14.78□□□□□ -0.04
SPAST-201ENST00000315285 CCNA1P78396 465 aa14.78□□□□□ -0.04
SPAST-201ENST00000315285 SH2D4BQ5SQS7 431 aa14.78□□□□□ -0.04
SPAST-201ENST00000315285 CIAPIN1Q6FI81 312 aa14.78□□□□□ -0.04
SPAST-201ENST00000315285 ZNF746Q6NUN9 644 aaPredicted RBP14.78□□□□□ -0.04
SPAST-201ENST00000315285 ARHGAP27Q6ZUM4 889 aa14.78□□□□□ -0.04
SPAST-201ENST00000315285 NYAP1Q6ZVC0 841 aa14.78□□□□□ -0.04
SPAST-201ENST00000315285 RTKN2Q8IZC4 609 aa14.78□□□□□ -0.04
SPAST-201ENST00000315285 ZNF564Q8TBZ8 553 aaPredicted RBP14.78□□□□□ -0.04
SPAST-201ENST00000315285 ATP6V0A4Q9HBG4 840 aa14.78□□□□□ -0.04
SPAST-201ENST00000315285 SLC38A10Q9HBR0 1119 aa14.78□□□□□ -0.04
SPAST-201ENST00000315285 WDR91A4D1P6 747 aa14.78□□□□□ -0.04
SPAST-201ENST00000315285 ECE2O60344 883 aa14.78□□□□□ -0.04
SPAST-201ENST00000315285 OPHN1O60890 802 aa14.78□□□□□ -0.04
SPAST-201ENST00000315285 PLS3P13797 630 aa14.78□□□□□ -0.04
SPAST-201ENST00000315285 GUCY2CP25092 1073 aa14.78□□□□□ -0.04
SPAST-201ENST00000315285 QARSP47897 775 aaKnown RBP14.78□□□□□ -0.04
SPAST-201ENST00000315285 KRT76Q01546 638 aa14.78□□□□□ -0.04
SPAST-201ENST00000315285 NFIXQ14938 502 aa14.78□□□□□ -0.04
SPAST-201ENST00000315285 PDCD7Q8N8D1 485 aaKnown RBP14.78□□□□□ -0.04
SPAST-201ENST00000315285 RFFLQ8WZ73 363 aa14.78□□□□□ -0.04
SPAST-201ENST00000315285 LRRC1Q9BTT6 524 aa14.78□□□□□ -0.04
SPAST-201ENST00000315285 SLITRK6Q9H5Y7 841 aa14.78□□□□□ -0.04
SPAST-201ENST00000315285 SAYSD1Q9NPB0 183 aa14.78□□□□□ -0.04
SPAST-201ENST00000315285 MTMR4Q9NYA4 1195 aa14.78□□□□□ -0.04
SPAST-201ENST00000315285 NUB1Q9Y5A7 615 aa14.78□□□□□ -0.04
SPAST-201ENST00000315285 IPO5O00410 1097 aaKnown RBP14.78□□□□□ -0.04
SPAST-201ENST00000315285 CAMTA2O94983 1202 aa14.78□□□□□ -0.04
SPAST-201ENST00000315285 PMS2P54278 862 aa14.78□□□□□ -0.04
SPAST-201ENST00000315285 GRIN1Q05586 938 aa14.78□□□□□ -0.04
SPAST-201ENST00000315285 LXNQ9BS40 222 aa14.78□□□□□ -0.04
SPAST-201ENST00000315285 SNX25Q9H3E2 840 aa14.78□□□□□ -0.04
SPAST-201ENST00000315285 PDXKO00764 312 aa14.78□□□□□ -0.04
SPAST-201ENST00000315285 ZNF185O15231 689 aa14.78□□□□□ -0.04
SPAST-201ENST00000315285 C21orf2O43822 256 aa14.78□□□□□ -0.04
SPAST-201ENST00000315285 GYPCP04921 128 aa14.78□□□□□ -0.04
SPAST-201ENST00000315285 GSTA1P08263 222 aa14.78□□□□□ -0.04
SPAST-201ENST00000315285 GSTA2P09210 222 aa14.78□□□□□ -0.04
SPAST-201ENST00000315285 PSMA2P25787 234 aa14.78□□□□□ -0.04
SPAST-201ENST00000315285 DPP9Q86TI2 863 aa14.78□□□□□ -0.04
SPAST-201ENST00000315285 RBM41Q96IZ5 413 aaKnown RBP14.78□□□□□ -0.04
SPAST-201ENST00000315285 RPF1Q9H9Y2 349 aaKnown RBP14.78□□□□□ -0.04
SPAST-201ENST00000315285 CNTNAP5Q8WYK1 1306 aa14.77□□□□□ -0.04
SPAST-201ENST00000315285 DENND3A2RUS2 1198 aa14.77□□□□□ -0.04
SPAST-201ENST00000315285 PRPSAP1Q14558 356 aa14.77□□□□□ -0.04
SPAST-201ENST00000315285 ZNF394Q53GI3 561 aa14.77□□□□□ -0.04
SPAST-201ENST00000315285 TTLL6Q8N841 843 aa14.77□□□□□ -0.04
SPAST-201ENST00000315285 RPS6KC1Q96S38 1066 aa14.77□□□□□ -0.04
SPAST-201ENST00000315285 NUP85Q9BW27 656 aa14.77□□□□□ -0.04
SPAST-201ENST00000315285 ZWILCHQ9H900 591 aa14.77□□□□□ -0.04
SPAST-201ENST00000315285 RAVER2Q9HCJ3 691 aaKnown RBP14.77□□□□□ -0.04
SPAST-201ENST00000315285 SMYD2Q9NRG4 433 aa14.77□□□□□ -0.04
SPAST-201ENST00000315285 GINM1Q9NU53 330 aa14.77□□□□□ -0.04
SPAST-201ENST00000315285 DIP2AQ14689 1571 aa14.77□□□□□ -0.04
SPAST-201ENST00000315285 FRMPD1Q5SYB0 1578 aa14.77□□□□□ -0.04
SPAST-201ENST00000315285 RFX1P22670 979 aa14.77□□□□□ -0.04
SPAST-201ENST00000315285 CHRNA3P32297 505 aa14.77□□□□□ -0.04
SPAST-201ENST00000315285 PPP2R2AP63151 447 aa14.77□□□□□ -0.04
SPAST-201ENST00000315285 SEPT6Q14141 434 aa14.77□□□□□ -0.04
SPAST-201ENST00000315285 RAPH1Q70E73 1250 aa14.77□□□□□ -0.04
SPAST-201ENST00000315285 ELOA2Q8IYF1 753 aaPredicted RBP14.77□□□□□ -0.04
SPAST-201ENST00000315285 TMEM35BQ8NCS4 154 aa14.77□□□□□ -0.04
SPAST-201ENST00000315285 ATP6V1G3Q96LB4 118 aa14.77□□□□□ -0.04
SPAST-201ENST00000315285 HEXIM2Q96MH2 286 aaKnown RBP14.77□□□□□ -0.04
SPAST-201ENST00000315285 NLRP4Q96MN2 994 aa14.77□□□□□ -0.04
SPAST-201ENST00000315285 C11orf70Q9BRQ4 267 aa14.77□□□□□ -0.04
SPAST-201ENST00000315285 FAM213AQ9BRX8 229 aa14.77□□□□□ -0.04
SPAST-201ENST00000315285 CEP170BQ9Y4F5 1589 aaPredicted RBP14.77□□□□□ -0.05
SPAST-201ENST00000315285 SOX5P35711 763 aa14.77□□□□□ -0.05
SPAST-201ENST00000315285 MYO1EQ12965 1108 aa14.77□□□□□ -0.05
SPAST-201ENST00000315285 DPY19L2Q6NUT2 758 aa14.77□□□□□ -0.05
SPAST-201ENST00000315285 TBC1D1Q86TI0 1168 aaPredicted RBP14.77□□□□□ -0.05
SPAST-201ENST00000315285 GBP7Q8N8V2 638 aaPredicted RBP14.77□□□□□ -0.05
SPAST-201ENST00000315285 DNAAF3Q8N9W5 541 aa14.77□□□□□ -0.05
SPAST-201ENST00000315285 GIMAP8Q8ND71 665 aaPredicted RBP14.77□□□□□ -0.05
SPAST-201ENST00000315285 PITPNM3Q9BZ71 974 aa14.77□□□□□ -0.05
SPAST-201ENST00000315285 SSU72P8A0A1W2PR75 194 aa14.77□□□□□ -0.05
SPAST-201ENST00000315285 FRMD3A2A2Y4 597 aa14.77□□□□□ -0.05
SPAST-201ENST00000315285 EYA4O95677 639 aa14.77□□□□□ -0.05
SPAST-201ENST00000315285 ZBED1O96006 694 aa14.77□□□□□ -0.05
SPAST-201ENST00000315285 DBN1Q16643 649 aa14.77□□□□□ -0.05
SPAST-201ENST00000315285 TMEM270Q6UE05 265 aa14.77□□□□□ -0.05
SPAST-201ENST00000315285 THNSL1Q8IYQ7 743 aa14.77□□□□□ -0.05
SPAST-201ENST00000315285 Q9H521 79 aa14.77□□□□□ -0.05
SPAST-201ENST00000315285 FLT1P17948 1338 aa14.76□□□□□ -0.05
SPAST-201ENST00000315285 GMNCA6NCL1 334 aa14.76□□□□□ -0.05
SPAST-201ENST00000315285 GPC4O75487 556 aa14.76□□□□□ -0.05
SPAST-201ENST00000315285 ABL1P00519 1130 aa14.76□□□□□ -0.05
SPAST-201ENST00000315285 ZNF543Q08ER8 600 aa14.76□□□□□ -0.05
SPAST-201ENST00000315285 MAP7Q14244 749 aa14.76□□□□□ -0.05
SPAST-201ENST00000315285 SLC18A3Q16572 532 aa14.76□□□□□ -0.05
SPAST-201ENST00000315285 PASD1Q8IV76 773 aa14.76□□□□□ -0.05
SPAST-201ENST00000315285 NLRP7Q8WX94 980 aa14.76□□□□□ -0.05
SPAST-201ENST00000315285 TRIM10Q9UDY6 481 aa14.76□□□□□ -0.05
SPAST-201ENST00000315285 PDS5AQ29RF7 1337 aaKnown RBP14.76□□□□□ -0.05
SPAST-201ENST00000315285 CLDN3O15551 220 aa14.76□□□□□ -0.05
SPAST-201ENST00000315285 ZNF667Q5HYK9 610 aa14.76□□□□□ -0.05
SPAST-201ENST00000315285 KRT39Q6A163 491 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms