RNA–Protein interactions for RNA: ENST00000311745.9

RBFOX1-201, Transcript of RNA binding fox-1 homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBFOX1, Length 3,268 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-201ENST00000311745 SLC43A3Q8NBI5 491 aa10.33□□□□□ -0.76
RBFOX1-201ENST00000311745 NOA1Q8NC60 698 aaKnown RBP10.33□□□□□ -0.76
RBFOX1-201ENST00000311745 PRMT6Q96LA8 375 aaPredicted RBP10.33□□□□□ -0.76
RBFOX1-201ENST00000311745 NDNQ99608 321 aa10.33□□□□□ -0.76
RBFOX1-201ENST00000311745 CHP1Q99653 195 aa10.33□□□□□ -0.76
RBFOX1-201ENST00000311745 SERPINA10Q9UK55 444 aa10.33□□□□□ -0.76
RBFOX1-201ENST00000311745 SPO11Q9Y5K1 396 aa10.33□□□□□ -0.76
RBFOX1-201ENST00000311745 TTC26A0AVF1 554 aa10.32□□□□□ -0.76
RBFOX1-201ENST00000311745 TXKP42681 527 aa10.32□□□□□ -0.76
RBFOX1-201ENST00000311745 SEPT2Q15019 361 aa10.32□□□□□ -0.76
RBFOX1-201ENST00000311745 PLCB4Q15147 1175 aa10.32□□□□□ -0.76
RBFOX1-201ENST00000311745 RNF220Q5VTB9 566 aa10.32□□□□□ -0.76
RBFOX1-201ENST00000311745 LRRC55Q6ZSA7 311 aa10.32□□□□□ -0.76
RBFOX1-201ENST00000311745 LONP2Q86WA8 852 aa10.32□□□□□ -0.76
RBFOX1-201ENST00000311745 CCDC155Q8N6L0 562 aa10.32□□□□□ -0.76
RBFOX1-201ENST00000311745 ETNPPLQ8TBG4 499 aa10.32□□□□□ -0.76
RBFOX1-201ENST00000311745 RAD54LQ92698 747 aa10.32□□□□□ -0.76
RBFOX1-201ENST00000311745 SLC35B4Q969S0 331 aa10.32□□□□□ -0.76
RBFOX1-201ENST00000311745 CEP295NLQ96MC4 621 aa10.32□□□□□ -0.76
RBFOX1-201ENST00000311745 CTAGE1Q96RT6 745 aa10.32□□□□□ -0.76
RBFOX1-201ENST00000311745 OSBPL10Q9BXB5 764 aa10.32□□□□□ -0.76
RBFOX1-201ENST00000311745 MKS1Q9NXB0 559 aa10.32□□□□□ -0.76
RBFOX1-201ENST00000311745 SEC63Q9UGP8 760 aaKnown RBP10.32□□□□□ -0.76
RBFOX1-201ENST00000311745 BARX2Q9UMQ3 279 aaPredicted RBP10.32□□□□□ -0.76
RBFOX1-201ENST00000311745 BACH1O14867 736 aa10.32□□□□□ -0.76
RBFOX1-201ENST00000311745 EPHB6O15197 1021 aa10.32□□□□□ -0.76
RBFOX1-201ENST00000311745 NFKBIAP25963 317 aa10.32□□□□□ -0.76
RBFOX1-201ENST00000311745 SNAP25P60880 206 aa10.32□□□□□ -0.76
RBFOX1-201ENST00000311745 CALCRLQ16602 461 aa10.32□□□□□ -0.76
RBFOX1-201ENST00000311745 MEA1Q16626 185 aa10.32□□□□□ -0.76
RBFOX1-201ENST00000311745 GMCL1P1Q8NEA9 526 aa10.32□□□□□ -0.76
RBFOX1-201ENST00000311745 ACTR5Q9H9F9 607 aaPredicted RBP10.32□□□□□ -0.76
RBFOX1-201ENST00000311745 WDR35Q9P2L0 1181 aa10.32□□□□□ -0.76
RBFOX1-201ENST00000311745 A0A1W2PQC6 194 aa10.32□□□□□ -0.76
RBFOX1-201ENST00000311745 TRIM43BA6NCK2 446 aa10.32□□□□□ -0.76
RBFOX1-201ENST00000311745 USP17L15C9J2P7 530 aa10.32□□□□□ -0.76
RBFOX1-201ENST00000311745 USP17L13C9JLJ4 530 aa10.32□□□□□ -0.76
RBFOX1-201ENST00000311745 USP17L11C9JVI0 530 aa10.32□□□□□ -0.76
RBFOX1-201ENST00000311745 USP17L18D6R9N7 530 aa10.32□□□□□ -0.76
RBFOX1-201ENST00000311745 USP17L22D6RA61 530 aa10.32□□□□□ -0.76
RBFOX1-201ENST00000311745 USP17L17D6RBQ6 530 aa10.32□□□□□ -0.76
RBFOX1-201ENST00000311745 USP17L19D6RCP7 530 aa10.32□□□□□ -0.76
RBFOX1-201ENST00000311745 USP17L20D6RJB6 530 aa10.32□□□□□ -0.76
RBFOX1-201ENST00000311745 UBA7P41226 1012 aa10.32□□□□□ -0.76
RBFOX1-201ENST00000311745 PSMC4P43686 418 aa10.32□□□□□ -0.76
RBFOX1-201ENST00000311745 HERVK_113P62684 666 aa10.32□□□□□ -0.76
RBFOX1-201ENST00000311745 USP17L24Q0WX57 530 aa10.32□□□□□ -0.76
RBFOX1-201ENST00000311745 DPY19L2P1Q6NXN4 242 aa10.32□□□□□ -0.76
RBFOX1-201ENST00000311745 USP17L6PQ6QN14 398 aa10.32□□□□□ -0.76
RBFOX1-201ENST00000311745 NCCRP1Q6ZVX7 275 aaPredicted RBP10.32□□□□□ -0.76
RBFOX1-201ENST00000311745 P2RX5Q93086 422 aa10.32□□□□□ -0.76
RBFOX1-201ENST00000311745 EEF2KMTQ96G04 330 aa10.32□□□□□ -0.76
RBFOX1-201ENST00000311745 DHTKD1Q96HY7 919 aaPredicted RBP10.32□□□□□ -0.76
RBFOX1-201ENST00000311745 NUP88Q99567 741 aaPredicted RBP10.32□□□□□ -0.76
RBFOX1-201ENST00000311745 ZNF180Q9UJW8 692 aa10.32□□□□□ -0.76
RBFOX1-201ENST00000311745 WDR37Q9Y2I8 494 aa10.32□□□□□ -0.76
RBFOX1-201ENST00000311745 ZNF711Q9Y462 761 aa10.32□□□□□ -0.76
RBFOX1-201ENST00000311745 P4HA2O15460 535 aa10.31□□□□□ -0.76
RBFOX1-201ENST00000311745 STIP1P31948 543 aaKnown RBP10.31□□□□□ -0.76
RBFOX1-201ENST00000311745 USP46P62068 366 aa10.31□□□□□ -0.76
RBFOX1-201ENST00000311745 ZNF569Q5MCW4 686 aa10.31□□□□□ -0.76
RBFOX1-201ENST00000311745 TBC1D1Q86TI0 1168 aaPredicted RBP10.31□□□□□ -0.76
RBFOX1-201ENST00000311745 TTC30BQ8N4P2 665 aa10.31□□□□□ -0.76
RBFOX1-201ENST00000311745 MSANTD4Q8NCY6 345 aa10.31□□□□□ -0.76
RBFOX1-201ENST00000311745 ZFAND2BQ8WV99 257 aa10.31□□□□□ -0.76
RBFOX1-201ENST00000311745 CPLX3Q8WVH0 158 aa10.31□□□□□ -0.76
RBFOX1-201ENST00000311745 FGD4Q96M96 766 aa10.31□□□□□ -0.76
RBFOX1-201ENST00000311745 NAA15Q9BXJ9 866 aaKnown RBP10.31□□□□□ -0.76
RBFOX1-201ENST00000311745 CDC23Q9UJX2 597 aa10.31□□□□□ -0.76
RBFOX1-201ENST00000311745 PHF24Q9UPV7 400 aa10.31□□□□□ -0.76
RBFOX1-201ENST00000311745 TMA7Q9Y2S6 64 aaKnown RBP10.31□□□□□ -0.76
RBFOX1-201ENST00000311745 LCTP09848 1927 aa10.31□□□□□ -0.76
RBFOX1-201ENST00000311745 RCCD1A6NED2 376 aa10.31□□□□□ -0.76
RBFOX1-201ENST00000311745 LUC7L3O95232 432 aaKnown RBP10.31□□□□□ -0.76
RBFOX1-201ENST00000311745 CCNE1P24864 410 aa10.31□□□□□ -0.76
RBFOX1-201ENST00000311745 TUBP50607 506 aa10.31□□□□□ -0.76
RBFOX1-201ENST00000311745 PDE6CP51160 858 aa10.31□□□□□ -0.76
RBFOX1-201ENST00000311745 FXNQ16595 210 aa10.31□□□□□ -0.76
RBFOX1-201ENST00000311745 ARSHQ5FYA8 562 aa10.31□□□□□ -0.76
RBFOX1-201ENST00000311745 GPATCH4Q5T3I0 446 aaKnown RBP10.31□□□□□ -0.76
RBFOX1-201ENST00000311745 BTNL9Q6UXG8 535 aa10.31□□□□□ -0.76
RBFOX1-201ENST00000311745 LCA5Q86VQ0 697 aa10.31□□□□□ -0.76
RBFOX1-201ENST00000311745 ZC3H3Q8IXZ2 948 aaKnown RBP10.31□□□□□ -0.76
RBFOX1-201ENST00000311745 MYOCDQ8IZQ8 938 aa10.31□□□□□ -0.76
RBFOX1-201ENST00000311745 CCT8L2Q96SF2 557 aa10.31□□□□□ -0.76
RBFOX1-201ENST00000311745 EBF2Q9HAK2 575 aa10.31□□□□□ -0.76
RBFOX1-201ENST00000311745 AGPAT5Q9NUQ2 364 aa10.31□□□□□ -0.76
RBFOX1-201ENST00000311745 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.31□□□□□ -0.76
RBFOX1-201ENST00000311745 TFR2Q9UP52 801 aa10.31□□□□□ -0.76
RBFOX1-201ENST00000311745 SIK3Q9Y2K2 1263 aa10.31□□□□□ -0.76
RBFOX1-201ENST00000311745 A6NHS1 94 aa10.31□□□□□ -0.76
RBFOX1-201ENST00000311745 HNRNPRO43390 633 aaKnown RBP10.31□□□□□ -0.76
RBFOX1-201ENST00000311745 ZFXP17010 805 aaPredicted RBP10.31□□□□□ -0.76
RBFOX1-201ENST00000311745 EEF1GP26641 437 aaKnown RBP10.31□□□□□ -0.76
RBFOX1-201ENST00000311745 HDAC4P56524 1084 aa10.31□□□□□ -0.76
RBFOX1-201ENST00000311745 ELF3P78545 371 aaPredicted RBP10.31□□□□□ -0.76
RBFOX1-201ENST00000311745 EZH2Q15910 746 aaKnown RBP10.31□□□□□ -0.76
RBFOX1-201ENST00000311745 KCTD17Q8N5Z5 321 aa10.31□□□□□ -0.76
RBFOX1-201ENST00000311745 FLAD1Q8NFF5 587 aa10.31□□□□□ -0.76
RBFOX1-201ENST00000311745 AGAP11Q8TF27 550 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms