RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 CCDC124Q96CT7 223 aaKnown RBP8.79□□□□□ -1
VPS41-202ENST00000310301 POLR3CQ9BUI4 534 aaPredicted RBP8.79□□□□□ -1
VPS41-202ENST00000310301 KATNAL1Q9BW62 490 aa8.79□□□□□ -1
VPS41-202ENST00000310301 RNF146Q9NTX7 359 aa8.79□□□□□ -1
VPS41-202ENST00000310301 MORC2Q9Y6X9 1032 aaPredicted RBP8.79□□□□□ -1
VPS41-202ENST00000310301 A0A1W2PQ27 194 aa8.79□□□□□ -1
VPS41-202ENST00000310301 A0A1W2PQ64 194 aa8.79□□□□□ -1
VPS41-202ENST00000310301 A0A1W2PQD8 194 aa8.79□□□□□ -1
VPS41-202ENST00000310301 H7C0C1 242 aa8.79□□□□□ -1
VPS41-202ENST00000310301 GSTA4O15217 222 aa8.79□□□□□ -1
VPS41-202ENST00000310301 GYG2O15488 501 aa8.79□□□□□ -1
VPS41-202ENST00000310301 XPOTO43592 962 aaKnown RBP8.79□□□□□ -1
VPS41-202ENST00000310301 HSPD1P10809 573 aaKnown RBP8.79□□□□□ -1
VPS41-202ENST00000310301 ATP5OP48047 213 aa8.79□□□□□ -1
VPS41-202ENST00000310301 ADAM9Q13443 819 aa8.79□□□□□ -1
VPS41-202ENST00000310301 MTMR2Q13614 643 aa8.79□□□□□ -1
VPS41-202ENST00000310301 SGO2Q562F6 1265 aa8.79□□□□□ -1
VPS41-202ENST00000310301 EPHA10Q5JZY3 1008 aa8.79□□□□□ -1
VPS41-202ENST00000310301 SYT2Q8N9I0 419 aaPredicted RBP8.79□□□□□ -1
VPS41-202ENST00000310301 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.79□□□□□ -1
VPS41-202ENST00000310301 PBKQ96KB5 322 aa8.79□□□□□ -1
VPS41-202ENST00000310301 CXorf56Q9H5V9 222 aa8.79□□□□□ -1
VPS41-202ENST00000310301 RNF14Q9UBS8 474 aa8.79□□□□□ -1
VPS41-202ENST00000310301 G3BP2Q9UN86 482 aaKnown RBP8.79□□□□□ -1
VPS41-202ENST00000310301 BZW2Q9Y6E2 419 aaKnown RBP8.79□□□□□ -1
VPS41-202ENST00000310301 DCDC2CA8MYV0 355 aa8.79□□□□□ -1
VPS41-202ENST00000310301 MCAMP43121 646 aa8.79□□□□□ -1
VPS41-202ENST00000310301 PLA2G4DQ86XP0 818 aa8.79□□□□□ -1
VPS41-202ENST00000310301 VSTM4Q8IW00 320 aa8.79□□□□□ -1
VPS41-202ENST00000310301 SOCS4Q8WXH5 440 aa8.79□□□□□ -1
VPS41-202ENST00000310301 INO80BQ9C086 356 aaPredicted RBP8.79□□□□□ -1
VPS41-202ENST00000310301 PIH1D3Q9NQM4 214 aaKnown RBP8.79□□□□□ -1
VPS41-202ENST00000310301 KLC4Q9NSK0 619 aa8.79□□□□□ -1
VPS41-202ENST00000310301 SATB2Q9UPW6 733 aa8.79□□□□□ -1
VPS41-202ENST00000310301 ZMYM6O95789 1325 aa8.79□□□□□ -1
VPS41-202ENST00000310301 ARHGEF9O43307 516 aa8.78□□□□□ -1
VPS41-202ENST00000310301 PRMT2P55345 433 aa8.78□□□□□ -1
VPS41-202ENST00000310301 PLEKHH3Q7Z736 793 aa8.78□□□□□ -1
VPS41-202ENST00000310301 MAP7D3Q8IWC1 876 aa8.78□□□□□ -1
VPS41-202ENST00000310301 MCUQ8NE86 351 aa8.78□□□□□ -1
VPS41-202ENST00000310301 OPTNQ96CV9 577 aa8.78□□□□□ -1
VPS41-202ENST00000310301 FMO2Q99518 471 aa8.78□□□□□ -1
VPS41-202ENST00000310301 PITPNM3Q9BZ71 974 aa8.78□□□□□ -1
VPS41-202ENST00000310301 NHEJ1Q9H9Q4 299 aaPredicted RBP8.78□□□□□ -1
VPS41-202ENST00000310301 YARSP54577 528 aaKnown RBP8.78□□□□□ -1
VPS41-202ENST00000310301 YWHAEP62258 255 aaKnown RBP8.78□□□□□ -1
VPS41-202ENST00000310301 PPATQ06203 517 aa8.78□□□□□ -1
VPS41-202ENST00000310301 EXOC3L4Q17RC7 722 aa8.78□□□□□ -1
VPS41-202ENST00000310301 SLFNL1Q499Z3 407 aa8.78□□□□□ -1
VPS41-202ENST00000310301 EMBQ6PCB8 327 aa8.78□□□□□ -1
VPS41-202ENST00000310301 ARHGAP18Q8N392 663 aa8.78□□□□□ -1
VPS41-202ENST00000310301 C7orf31Q8N865 590 aa8.78□□□□□ -1
VPS41-202ENST00000310301 GLT1D1Q96MS3 346 aa8.78□□□□□ -1
VPS41-202ENST00000310301 ZCCHC17Q9NP64 241 aaKnown RBP8.78□□□□□ -1
VPS41-202ENST00000310301 STOML1Q9UBI4 398 aa8.78□□□□□ -1
VPS41-202ENST00000310301 FIS1Q9Y3D6 152 aa8.78□□□□□ -1
VPS41-202ENST00000310301 N4BP1O75113 896 aaKnown RBP8.78□□□□□ -1
VPS41-202ENST00000310301 VIL1P09327 827 aaKnown RBP8.78□□□□□ -1
VPS41-202ENST00000310301 MRPS25P82663 173 aaKnown RBP8.78□□□□□ -1
VPS41-202ENST00000310301 ADCY2Q08462 1091 aa8.78□□□□□ -1
VPS41-202ENST00000310301 FAM83BQ5T0W9 1011 aa8.78□□□□□ -1
VPS41-202ENST00000310301 RNF169Q8NCN4 708 aa8.78□□□□□ -1
VPS41-202ENST00000310301 FAM167AQ96KS9 214 aa8.78□□□□□ -1
VPS41-202ENST00000310301 AP1M1Q9BXS5 423 aa8.78□□□□□ -1
VPS41-202ENST00000310301 MYO5BQ9ULV0 1848 aa8.78□□□□□ -1
VPS41-202ENST00000310301 EXOC1LA0A1B0GW35 172 aa8.78□□□□□ -1
VPS41-202ENST00000310301 PLS3P13797 630 aa8.78□□□□□ -1
VPS41-202ENST00000310301 NEK2P51955 445 aa8.78□□□□□ -1
VPS41-202ENST00000310301 RINT1Q6NUQ1 792 aa8.78□□□□□ -1
VPS41-202ENST00000310301 PTF1AQ7RTS3 328 aa8.78□□□□□ -1
VPS41-202ENST00000310301 SMYD4Q8IYR2 804 aaPredicted RBP8.78□□□□□ -1
VPS41-202ENST00000310301 DEPTORQ8TB45 409 aa8.78□□□□□ -1
VPS41-202ENST00000310301 RPS6KC1Q96S38 1066 aa8.78□□□□□ -1
VPS41-202ENST00000310301 ECT2Q9H8V3 914 aa8.78□□□□□ -1
VPS41-202ENST00000310301 HAUS2Q9NVX0 235 aa8.78□□□□□ -1
VPS41-202ENST00000310301 FGAP02671 866 aa8.78□□□□□ -1
VPS41-202ENST00000310301 TMTC4Q5T4D3 741 aa8.78□□□□□ -1
VPS41-202ENST00000310301 RFX6Q8HWS3 928 aa8.78□□□□□ -1
VPS41-202ENST00000310301 PPM1KQ8N3J5 372 aa8.78□□□□□ -1
VPS41-202ENST00000310301 ZNF512BQ96KM6 892 aaPredicted RBP8.78□□□□□ -1
VPS41-202ENST00000310301 TMEM39BQ9GZU3 492 aa8.78□□□□□ -1
VPS41-202ENST00000310301 TMEM60Q9H2L4 133 aa8.78□□□□□ -1
VPS41-202ENST00000310301 PCDHA13Q9Y5I0 950 aa8.78□□□□□ -1
VPS41-202ENST00000310301 KDM1AO60341 852 aa8.77□□□□□ -1
VPS41-202ENST00000310301 ATP5HO75947 161 aa8.77□□□□□ -1
VPS41-202ENST00000310301 CD2BP2O95400 341 aaKnown RBP8.77□□□□□ -1
VPS41-202ENST00000310301 DR1Q01658 176 aa8.77□□□□□ -1
VPS41-202ENST00000310301 SP3Q02447 781 aa8.77□□□□□ -1
VPS41-202ENST00000310301 SCRN1Q12765 414 aa8.77□□□□□ -1
VPS41-202ENST00000310301 ARID5BQ14865 1188 aa8.77□□□□□ -1
VPS41-202ENST00000310301 PRAMEF18Q5VWM3 479 aa8.77□□□□□ -1
VPS41-202ENST00000310301 RGS9BPQ6ZS82 235 aa8.77□□□□□ -1
VPS41-202ENST00000310301 BLIDQ8IZY5 108 aa8.77□□□□□ -1
VPS41-202ENST00000310301 CHST13Q8NET6 341 aa8.77□□□□□ -1
VPS41-202ENST00000310301 OLFM3Q96PB7 478 aa8.77□□□□□ -1
VPS41-202ENST00000310301 RIOK1Q9BRS2 568 aaKnown RBP8.77□□□□□ -1
VPS41-202ENST00000310301 MROH8Q9H579 483 aa8.77□□□□□ -1
VPS41-202ENST00000310301 ANTXR1Q9H6X2 564 aa8.77□□□□□ -1
VPS41-202ENST00000310301 C1orf112Q9NSG2 853 aa8.77□□□□□ -1
VPS41-202ENST00000310301 MAN1B1Q9UKM7 699 aa8.77□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms