RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 MYL7Q01449 175 aa12.58□□□□□ -0.4
PTPN2-201ENST00000309660 MTMR1Q13613 665 aa12.58□□□□□ -0.4
PTPN2-201ENST00000309660 TRADDQ15628 312 aa12.58□□□□□ -0.4
PTPN2-201ENST00000309660 ZC3H3Q8IXZ2 948 aaKnown RBP12.58□□□□□ -0.4
PTPN2-201ENST00000309660 SLC16A3O15427 465 aaKnown RBP12.58□□□□□ -0.4
PTPN2-201ENST00000309660 SYF2O95926 243 aaKnown RBP12.58□□□□□ -0.4
PTPN2-201ENST00000309660 KRT13P13646 458 aa12.58□□□□□ -0.4
PTPN2-201ENST00000309660 GCLMP48507 274 aa12.58□□□□□ -0.4
PTPN2-201ENST00000309660 SETQ01105 290 aaPredicted RBP12.58□□□□□ -0.4
PTPN2-201ENST00000309660 BMT2Q1RMZ1 405 aa12.58□□□□□ -0.4
PTPN2-201ENST00000309660 PLA2G4FQ68DD2 849 aa12.58□□□□□ -0.4
PTPN2-201ENST00000309660 PRPF38AQ8NAV1 312 aaKnown RBP12.58□□□□□ -0.4
PTPN2-201ENST00000309660 ELMO3Q96BJ8 720 aa12.58□□□□□ -0.4
PTPN2-201ENST00000309660 TAAR1Q96RJ0 339 aa12.58□□□□□ -0.4
PTPN2-201ENST00000309660 SIX2Q9NPC8 291 aa12.58□□□□□ -0.4
PTPN2-201ENST00000309660 LARSQ9P2J5 1176 aaKnown RBP12.58□□□□□ -0.4
PTPN2-201ENST00000309660 CHORDC1Q9UHD1 332 aaPredicted RBP12.58□□□□□ -0.4
PTPN2-201ENST00000309660 BZW2Q9Y6E2 419 aaKnown RBP12.58□□□□□ -0.4
PTPN2-201ENST00000309660 ZHX2Q9Y6X8 837 aa12.58□□□□□ -0.4
PTPN2-201ENST00000309660 ASTN2O75129 1339 aaPredicted RBP12.58□□□□□ -0.4
PTPN2-201ENST00000309660 FRMPD4Q14CM0 1322 aa12.58□□□□□ -0.4
PTPN2-201ENST00000309660 CCDC169A6NNP5 214 aa12.57□□□□□ -0.4
PTPN2-201ENST00000309660 DDX3XO00571 662 aaKnown RBP eCLIP12.57□□□□□ -0.42e-21■■■■■ 29.2
PTPN2-201ENST00000309660 NPEPPSP55786 919 aa12.57□□□□□ -0.4
PTPN2-201ENST00000309660 DLG4P78352 724 aa12.57□□□□□ -0.4
PTPN2-201ENST00000309660 MTMR2Q13614 643 aa12.57□□□□□ -0.4
PTPN2-201ENST00000309660 MEI1Q5TIA1 1274 aa12.57□□□□□ -0.4
PTPN2-201ENST00000309660 TTC19Q6DKK2 380 aaPredicted RBP12.57□□□□□ -0.4
PTPN2-201ENST00000309660 SAMD7Q7Z3H4 446 aa12.57□□□□□ -0.4
PTPN2-201ENST00000309660 AFAP1L1Q8TED9 768 aa12.57□□□□□ -0.4
PTPN2-201ENST00000309660 CCDC127Q96BQ5 260 aa12.57□□□□□ -0.4
PTPN2-201ENST00000309660 MYOZ2Q9NPC6 264 aa12.57□□□□□ -0.4
PTPN2-201ENST00000309660 OSGEPQ9NPF4 335 aa12.57□□□□□ -0.4
PTPN2-201ENST00000309660 EIF3DO15371 548 aaKnown RBP eCLIP12.57□□□□□ -0.4
PTPN2-201ENST00000309660 ICAM1P05362 532 aa12.57□□□□□ -0.4
PTPN2-201ENST00000309660 PEX3P56589 373 aa12.57□□□□□ -0.4
PTPN2-201ENST00000309660 RPS6P62753 249 aaKnown RBP12.57□□□□□ -0.4
PTPN2-201ENST00000309660 FAM102BQ5T8I3 360 aa12.57□□□□□ -0.4
PTPN2-201ENST00000309660 ARHGAP27Q6ZUM4 889 aa12.57□□□□□ -0.4
PTPN2-201ENST00000309660 CBWD1Q9BRT8 395 aa12.57□□□□□ -0.4
PTPN2-201ENST00000309660 KIFC3Q9BVG8 833 aa12.57□□□□□ -0.4
PTPN2-201ENST00000309660 CENPHQ9H3R5 247 aa12.57□□□□□ -0.4
PTPN2-201ENST00000309660 CALCOCO1Q9P1Z2 691 aa12.57□□□□□ -0.4
PTPN2-201ENST00000309660 PCDHGC5Q9Y5F6 944 aa12.57□□□□□ -0.4
PTPN2-201ENST00000309660 SLC16A4O15374 487 aa12.57□□□□□ -0.4
PTPN2-201ENST00000309660 ZBTB7AO95365 584 aa12.57□□□□□ -0.4
PTPN2-201ENST00000309660 GALCP54803 685 aa12.57□□□□□ -0.4
PTPN2-201ENST00000309660 ITGB3BPQ13352 177 aaPredicted RBP12.57□□□□□ -0.4
PTPN2-201ENST00000309660 CIAPIN1Q6FI81 312 aa12.57□□□□□ -0.4
PTPN2-201ENST00000309660 ZSWIM2Q8NEG5 633 aa12.57□□□□□ -0.4
PTPN2-201ENST00000309660 INTS2Q9H0H0 1204 aaKnown RBP12.57□□□□□ -0.4
PTPN2-201ENST00000309660 TMEM110-MUSTN1A8MSY1 372 aa12.56□□□□□ -0.4
PTPN2-201ENST00000309660 SPP2Q13103 211 aa12.56□□□□□ -0.4
PTPN2-201ENST00000309660 XKR9Q5GH70 373 aa12.56□□□□□ -0.4
PTPN2-201ENST00000309660 KCTD16Q68DU8 428 aa12.56□□□□□ -0.4
PTPN2-201ENST00000309660 ZNF746Q6NUN9 644 aaPredicted RBP12.56□□□□□ -0.4
PTPN2-201ENST00000309660 IFT20Q8IY31 132 aa12.56□□□□□ -0.4
PTPN2-201ENST00000309660 DAW1Q8N136 415 aa12.56□□□□□ -0.4
PTPN2-201ENST00000309660 TSEN2Q8NCE0 465 aaKnown RBP12.56□□□□□ -0.4
PTPN2-201ENST00000309660 GOLGA6CA6NDK9 693 aa12.56□□□□□ -0.4
PTPN2-201ENST00000309660 F8VZ95 297 aa12.56□□□□□ -0.4
PTPN2-201ENST00000309660 KIF4AO95239 1232 aa12.56□□□□□ -0.4
PTPN2-201ENST00000309660 FAM153BP0C7A2 387 aa12.56□□□□□ -0.4
PTPN2-201ENST00000309660 GOLGA6DP0CG33 693 aa12.56□□□□□ -0.4
PTPN2-201ENST00000309660 FERP16591 822 aa12.56□□□□□ -0.4
PTPN2-201ENST00000309660 TNFAIP3P21580 790 aa12.56□□□□□ -0.4
PTPN2-201ENST00000309660 SOX5P35711 763 aa12.56□□□□□ -0.4
PTPN2-201ENST00000309660 BFSP1Q12934 665 aa12.56□□□□□ -0.4
PTPN2-201ENST00000309660 PRKG1Q13976 671 aa12.56□□□□□ -0.4
PTPN2-201ENST00000309660 IFI16Q16666 785 aaKnown RBP12.56□□□□□ -0.4
PTPN2-201ENST00000309660 TKFCQ3LXA3 575 aa12.56□□□□□ -0.4
PTPN2-201ENST00000309660 FAM153CQ494X1 144 aa12.56□□□□□ -0.4
PTPN2-201ENST00000309660 TAF3Q5VWG9 929 aa12.56□□□□□ -0.4
PTPN2-201ENST00000309660 AENQ8WTP8 325 aaKnown RBP12.56□□□□□ -0.4
PTPN2-201ENST00000309660 FIZ1Q96SL8 496 aa12.56□□□□□ -0.4
PTPN2-201ENST00000309660 RMDN3Q96TC7 470 aa12.56□□□□□ -0.4
PTPN2-201ENST00000309660 DDX47Q9H0S4 455 aaKnown RBP12.56□□□□□ -0.4
PTPN2-201ENST00000309660 UBE2TQ9NPD8 197 aaPredicted RBP12.56□□□□□ -0.4
PTPN2-201ENST00000309660 GOLGA6AQ9NYA3 693 aa12.56□□□□□ -0.4
PTPN2-201ENST00000309660 FAM153AQ9UHL3 310 aa12.56□□□□□ -0.4
PTPN2-201ENST00000309660 ZNF536O15090 1300 aa12.56□□□□□ -0.4
PTPN2-201ENST00000309660 EMSYQ7Z589 1322 aa12.56□□□□□ -0.4
PTPN2-201ENST00000309660 ATP9AO75110 1047 aa12.56□□□□□ -0.4
PTPN2-201ENST00000309660 P4HBP07237 508 aaKnown RBP12.56□□□□□ -0.4
PTPN2-201ENST00000309660 EPHB4P54760 987 aa12.56□□□□□ -0.4
PTPN2-201ENST00000309660 SOX10P56693 466 aa12.56□□□□□ -0.4
PTPN2-201ENST00000309660 CTNNBL1Q8WYA6 563 aaPredicted RBP12.56□□□□□ -0.4
PTPN2-201ENST00000309660 TRIM31Q9BZY9 425 aa12.56□□□□□ -0.4
PTPN2-201ENST00000309660 SEL1LQ9UBV2 794 aa12.56□□□□□ -0.4
PTPN2-201ENST00000309660 ODF2LQ9ULJ1 636 aa12.56□□□□□ -0.4
PTPN2-201ENST00000309660 RAD51CO43502 376 aa12.55□□□□□ -0.4
PTPN2-201ENST00000309660 HSF2BPO75031 334 aa12.55□□□□□ -0.4
PTPN2-201ENST00000309660 QARSP47897 775 aaKnown RBP12.55□□□□□ -0.4
PTPN2-201ENST00000309660 TNNC1P63316 161 aa12.55□□□□□ -0.4
PTPN2-201ENST00000309660 MRPS9P82933 396 aaKnown RBP12.55□□□□□ -0.4
PTPN2-201ENST00000309660 ARHGEF16Q5VV41 709 aa12.55□□□□□ -0.4
PTPN2-201ENST00000309660 DPY19L2P1Q6NXN4 242 aa12.55□□□□□ -0.4
PTPN2-201ENST00000309660 PSMD1Q99460 953 aa12.55□□□□□ -0.4
PTPN2-201ENST00000309660 RIT2Q99578 217 aa12.55□□□□□ -0.4
PTPN2-201ENST00000309660 VIPAS39Q9H9C1 493 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms