RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 MYO1FO00160 1098 aa26.52■■□□□ 1.84
SPTSSA-201ENST00000298130 GLG1Q92896 1179 aa26.52■■□□□ 1.84
SPTSSA-201ENST00000298130 ZDHHC15Q96MV8 337 aa26.52■■□□□ 1.84
SPTSSA-201ENST00000298130 THAP2Q9H0W7 228 aa26.52■■□□□ 1.84
SPTSSA-201ENST00000298130 NFS1Q9Y697 457 aa26.52■■□□□ 1.84
SPTSSA-201ENST00000298130 FMO5P49326 533 aa26.52■■□□□ 1.84
SPTSSA-201ENST00000298130 RNF187Q5TA31 235 aaPredicted RBP26.52■■□□□ 1.84
SPTSSA-201ENST00000298130 MOXD1Q6UVY6 613 aa26.52■■□□□ 1.84
SPTSSA-201ENST00000298130 HOOK2Q96ED9 719 aa26.52■■□□□ 1.84
SPTSSA-201ENST00000298130 ERVK-5Q9HDB9 667 aa26.52■■□□□ 1.84
SPTSSA-201ENST00000298130 NENFQ9UMX5 172 aa26.52■■□□□ 1.84
SPTSSA-201ENST00000298130 CAPN7Q9Y6W3 813 aa26.52■■□□□ 1.84
SPTSSA-201ENST00000298130 IGLV3-22A0A075B6J6 115 aa26.51■■□□□ 1.83
SPTSSA-201ENST00000298130 TMEM110-MUSTN1A8MSY1 372 aa26.51■■□□□ 1.83
SPTSSA-201ENST00000298130 SOX5P35711 763 aa26.51■■□□□ 1.83
SPTSSA-201ENST00000298130 PSMC2P35998 433 aaKnown RBP26.51■■□□□ 1.83
SPTSSA-201ENST00000298130 MKRN4PQ13434 485 aaPredicted RBP26.51■■□□□ 1.83
SPTSSA-201ENST00000298130 AMFRQ9UKV5 643 aa26.51■■□□□ 1.83
SPTSSA-201ENST00000298130 TBX3O15119 743 aa26.51■■□□□ 1.83
SPTSSA-201ENST00000298130 DHX9Q08211 1270 aaKnown RBP26.51■■□□□ 1.83
SPTSSA-201ENST00000298130 OTOP1Q7RTM1 612 aa26.51■■□□□ 1.83
SPTSSA-201ENST00000298130 NLRP14Q86W24 1093 aa26.51■■□□□ 1.83
SPTSSA-201ENST00000298130 CD302Q8IX05 232 aa26.51■■□□□ 1.83
SPTSSA-201ENST00000298130 ACER1Q8TDN7 264 aa26.51■■□□□ 1.83
SPTSSA-201ENST00000298130 HSD17B14Q9BPX1 270 aa26.51■■□□□ 1.83
SPTSSA-201ENST00000298130 CNOT8Q9UFF9 292 aaKnown RBP26.51■■□□□ 1.83
SPTSSA-201ENST00000298130 NOVA2Q9UNW9 492 aaKnown RBP26.51■■□□□ 1.83
SPTSSA-201ENST00000298130 ATP8A1Q9Y2Q0 1164 aa26.51■■□□□ 1.83
SPTSSA-201ENST00000298130 KLRG2A4D1S0 409 aaPredicted RBP26.5■■□□□ 1.83
SPTSSA-201ENST00000298130 ZNF746Q6NUN9 644 aaPredicted RBP26.5■■□□□ 1.83
SPTSSA-201ENST00000298130 TMEM179Q6ZVK1 233 aa26.5■■□□□ 1.83
SPTSSA-201ENST00000298130 C1orf186Q6ZWK4 172 aa26.5■■□□□ 1.83
SPTSSA-201ENST00000298130 ELMO3Q96BJ8 720 aa26.5■■□□□ 1.83
SPTSSA-201ENST00000298130 DLG4P78352 724 aa26.5■■□□□ 1.83
SPTSSA-201ENST00000298130 BMT2Q1RMZ1 405 aa26.5■■□□□ 1.83
SPTSSA-201ENST00000298130 ODR4Q5SWX8 454 aa26.5■■□□□ 1.83
SPTSSA-201ENST00000298130 MYCBPAPQ8TBZ2 947 aa26.5■■□□□ 1.83
SPTSSA-201ENST00000298130 SLC20A1Q8WUM9 679 aa26.5■■□□□ 1.83
SPTSSA-201ENST00000298130 GPR88Q9GZN0 384 aa26.5■■□□□ 1.83
SPTSSA-201ENST00000298130 FERP16591 822 aa26.49■■□□□ 1.83
SPTSSA-201ENST00000298130 MEX3CQ5U5Q3 659 aaKnown RBP26.49■■□□□ 1.83
SPTSSA-201ENST00000298130 SLFN11Q7Z7L1 901 aa26.49■■□□□ 1.83
SPTSSA-201ENST00000298130 FAM178BQ8IXR5 827 aa26.49■■□□□ 1.83
SPTSSA-201ENST00000298130 PARVGQ9HBI0 331 aa26.49■■□□□ 1.83
SPTSSA-201ENST00000298130 ACP6Q9NPH0 428 aa26.49■■□□□ 1.83
SPTSSA-201ENST00000298130 COG5Q9UP83 839 aa26.49■■□□□ 1.83
SPTSSA-201ENST00000298130 IFT88Q13099 833 aa26.49■■□□□ 1.83
SPTSSA-201ENST00000298130 CUL1Q13616 776 aa26.49■■□□□ 1.83
SPTSSA-201ENST00000298130 ZSWIM2Q8NEG5 633 aa26.49■■□□□ 1.83
SPTSSA-201ENST00000298130 HES6Q96HZ4 224 aa26.49■■□□□ 1.83
SPTSSA-201ENST00000298130 SUCLA2Q9P2R7 463 aaPredicted RBP26.49■■□□□ 1.83
SPTSSA-201ENST00000298130 HMGB1P1B2RPK0 211 aaPredicted RBP26.48■■□□□ 1.83
SPTSSA-201ENST00000298130 SLC16A3O15427 465 aaKnown RBP26.48■■□□□ 1.83
SPTSSA-201ENST00000298130 ARP10275 920 aa26.48■■□□□ 1.83
SPTSSA-201ENST00000298130 TATDN1Q6P1N9 297 aa26.48■■□□□ 1.83
SPTSSA-201ENST00000298130 OTUD6BQ8N6M0 293 aa26.48■■□□□ 1.83
SPTSSA-201ENST00000298130 SLC30A5Q8TAD4 765 aa26.48■■□□□ 1.83
SPTSSA-201ENST00000298130 POLR3CQ9BUI4 534 aaPredicted RBP26.48■■□□□ 1.83
SPTSSA-201ENST00000298130 GOPCQ9HD26 462 aa26.48■■□□□ 1.83
SPTSSA-201ENST00000298130 SMIM23A6NLE4 172 aa26.48■■□□□ 1.83
SPTSSA-201ENST00000298130 FOXN3O00409 490 aaPredicted RBP26.48■■□□□ 1.83
SPTSSA-201ENST00000298130 UBAP2Q5T6F2 1119 aaKnown RBP26.48■■□□□ 1.83
SPTSSA-201ENST00000298130 PHLDB3Q6NSJ2 640 aa26.48■■□□□ 1.83
SPTSSA-201ENST00000298130 UHMK1Q8TAS1 419 aaKnown RBP26.48■■□□□ 1.83
SPTSSA-201ENST00000298130 LY75O60449 1722 aa26.48■■□□□ 1.83
SPTSSA-201ENST00000298130 FOSP01100 380 aaPredicted RBP26.47■■□□□ 1.83
SPTSSA-201ENST00000298130 USP8P40818 1118 aa26.47■■□□□ 1.83
SPTSSA-201ENST00000298130 LMBR1Q8WVP7 490 aa26.47■■□□□ 1.83
SPTSSA-201ENST00000298130 CTNNBL1Q8WYA6 563 aaPredicted RBP26.47■■□□□ 1.83
SPTSSA-201ENST00000298130 FIZ1Q96SL8 496 aa26.47■■□□□ 1.83
SPTSSA-201ENST00000298130 INTS2Q9H0H0 1204 aaKnown RBP26.47■■□□□ 1.83
SPTSSA-201ENST00000298130 AGPAT3Q9NRZ7 376 aa26.47■■□□□ 1.83
SPTSSA-201ENST00000298130 CIITAP33076 1130 aa26.47■■□□□ 1.83
SPTSSA-201ENST00000298130 SYCP3Q8IZU3 236 aa26.47■■□□□ 1.83
SPTSSA-201ENST00000298130 MDM1Q8TC05 714 aa26.47■■□□□ 1.83
SPTSSA-201ENST00000298130 ALG3Q92685 438 aa26.47■■□□□ 1.83
SPTSSA-201ENST00000298130 OLFML3Q9NRN5 406 aa26.47■■□□□ 1.83
SPTSSA-201ENST00000298130 EXOC3O60645 756 aa26.46■■□□□ 1.83
SPTSSA-201ENST00000298130 GAS7O60861 476 aa26.46■■□□□ 1.83
SPTSSA-201ENST00000298130 KIAA0754O94854 1291 aa26.46■■□□□ 1.83
SPTSSA-201ENST00000298130 MARCKSL1P49006 195 aa26.46■■□□□ 1.83
SPTSSA-201ENST00000298130 MAGOHP61326 146 aaKnown RBP26.46■■□□□ 1.83
SPTSSA-201ENST00000298130 RBM26Q5T8P6 1007 aaKnown RBP26.46■■□□□ 1.83
SPTSSA-201ENST00000298130 ZNF720Q7Z2F6 126 aa26.46■■□□□ 1.83
SPTSSA-201ENST00000298130 CPNE8Q86YQ8 564 aa26.46■■□□□ 1.83
SPTSSA-201ENST00000298130 MAGOHBQ96A72 148 aaKnown RBP26.46■■□□□ 1.83
SPTSSA-201ENST00000298130 CSRNP1Q96S65 589 aa26.46■■□□□ 1.83
SPTSSA-201ENST00000298130 LTBP4Q8N2S1 1624 aa26.46■■□□□ 1.83
SPTSSA-201ENST00000298130 TNFAIP3P21580 790 aa26.46■■□□□ 1.83
SPTSSA-201ENST00000298130 QPCTQ16769 361 aa26.46■■□□□ 1.83
SPTSSA-201ENST00000298130 KRT71Q3SY84 523 aa26.46■■□□□ 1.83
SPTSSA-201ENST00000298130 TMC3Q7Z5M5 1100 aa26.46■■□□□ 1.83
SPTSSA-201ENST00000298130 LRRC45Q96CN5 670 aa26.46■■□□□ 1.83
SPTSSA-201ENST00000298130 STK33Q9BYT3 514 aa26.46■■□□□ 1.83
SPTSSA-201ENST00000298130 ZBTB21Q9ULJ3 1066 aa26.46■■□□□ 1.83
SPTSSA-201ENST00000298130 UTRNP46939 3433 aa26.46■■□□□ 1.83
SPTSSA-201ENST00000298130 CES2O00748 559 aa26.46■■□□□ 1.83
SPTSSA-201ENST00000298130 DDX3YO15523 660 aaKnown RBP26.46■■□□□ 1.83
SPTSSA-201ENST00000298130 RASGEF1CQ8N431 466 aa26.46■■□□□ 1.83
SPTSSA-201ENST00000298130 PRMT6Q96LA8 375 aaPredicted RBP26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms