RNA–Protein interactions for RNA: ENST00000295549.8

LINC01116-201, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 2 BASIC

Gene LINC01116, Length 1,407 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-201ENST00000295549 FAM160A1Q05DH4 1040 aa25.07■■□□□ 1.6
LINC01116-201ENST00000295549 SNW1Q13573 536 aaKnown RBP25.07■■□□□ 1.6
LINC01116-201ENST00000295549 MXD4Q14582 209 aaPredicted RBP25.07■■□□□ 1.6
LINC01116-201ENST00000295549 LONRF3Q496Y0 759 aa25.07■■□□□ 1.6
LINC01116-201ENST00000295549 ZNF618Q5T7W0 954 aa25.07■■□□□ 1.6
LINC01116-201ENST00000295549 FMR1NBQ8N0W7 255 aaPredicted RBP25.07■■□□□ 1.6
LINC01116-201ENST00000295549 ENGASEQ8NFI3 743 aa25.07■■□□□ 1.6
LINC01116-201ENST00000295549 PRPF31Q8WWY3 499 aaKnown RBP25.07■■□□□ 1.6
LINC01116-201ENST00000295549 LOXHD1Q8IVV2 1947 aa25.06■■□□□ 1.6
LINC01116-201ENST00000295549 VTNP04004 478 aa25.06■■□□□ 1.6
LINC01116-201ENST00000295549 ITGB8P26012 769 aa25.06■■□□□ 1.6
LINC01116-201ENST00000295549 AMPD3Q01432 767 aa25.06■■□□□ 1.6
LINC01116-201ENST00000295549 FAM102BQ5T8I3 360 aa25.06■■□□□ 1.6
LINC01116-201ENST00000295549 TRAF7Q6Q0C0 670 aa25.06■■□□□ 1.6
LINC01116-201ENST00000295549 MAEAQ7L5Y9 396 aa25.06■■□□□ 1.6
LINC01116-201ENST00000295549 CEP57L1Q8IYX8 460 aa25.06■■□□□ 1.6
LINC01116-201ENST00000295549 KIFAP3Q92845 792 aa25.06■■□□□ 1.6
LINC01116-201ENST00000295549 PPP1R12CQ9BZL4 782 aa25.06■■□□□ 1.6
LINC01116-201ENST00000295549 LRRC27Q9C0I9 530 aa25.06■■□□□ 1.6
LINC01116-201ENST00000295549 LMBRD1Q9NUN5 540 aa25.06■■□□□ 1.6
LINC01116-201ENST00000295549 SERTAD1Q9UHV2 236 aa25.06■■□□□ 1.6
LINC01116-201ENST00000295549 UMODL1Q5DID0 1318 aa25.05■■□□□ 1.6
LINC01116-201ENST00000295549 ARID2Q68CP9 1835 aa25.05■■□□□ 1.6
LINC01116-201ENST00000295549 RSPH10B2B2RC85 870 aa25.05■■□□□ 1.6
LINC01116-201ENST00000295549 GPR32O75388 356 aa25.05■■□□□ 1.6
LINC01116-201ENST00000295549 CHRNA1P02708 482 aa25.05■■□□□ 1.6
LINC01116-201ENST00000295549 RSPH10BP0C881 870 aa25.05■■□□□ 1.6
LINC01116-201ENST00000295549 RAG1P15918 1043 aa25.05■■□□□ 1.6
LINC01116-201ENST00000295549 CYP2C18P33260 490 aa25.05■■□□□ 1.6
LINC01116-201ENST00000295549 MGAT3Q09327 533 aa25.05■■□□□ 1.6
LINC01116-201ENST00000295549 LRRC8DQ7L1W4 858 aa25.05■■□□□ 1.6
LINC01116-201ENST00000295549 RHPN2Q8IUC4 686 aa25.05■■□□□ 1.6
LINC01116-201ENST00000295549 DRC1Q96MC2 740 aa25.05■■□□□ 1.6
LINC01116-201ENST00000295549 POLR3FQ9H1D9 316 aaPredicted RBP25.05■■□□□ 1.6
LINC01116-201ENST00000295549 GPRC5CQ9NQ84 441 aa25.05■■□□□ 1.6
LINC01116-201ENST00000295549 ODF2LQ9ULJ1 636 aa25.05■■□□□ 1.6
LINC01116-201ENST00000295549 COL4A3BPQ9Y5P4 624 aa25.05■■□□□ 1.6
LINC01116-201ENST00000295549 MYMKA6NI61 221 aa25.04■■□□□ 1.6
LINC01116-201ENST00000295549 M0QZ92 97 aa25.04■■□□□ 1.6
LINC01116-201ENST00000295549 PARNO95453 639 aaKnown RBP25.04■■□□□ 1.6
LINC01116-201ENST00000295549 IQCF3P0C7M6 154 aa25.04■■□□□ 1.6
LINC01116-201ENST00000295549 GPC3P51654 580 aa25.04■■□□□ 1.6
LINC01116-201ENST00000295549 NLRP11P59045 1033 aaKnown RBP25.04■■□□□ 1.6
LINC01116-201ENST00000295549 TMEM62Q0P6H9 643 aa25.04■■□□□ 1.6
LINC01116-201ENST00000295549 LAMTOR4Q0VGL1 99 aa25.04■■□□□ 1.6
LINC01116-201ENST00000295549 DAW1Q8N136 415 aa25.04■■□□□ 1.6
LINC01116-201ENST00000295549 CELF4Q9BZC1 486 aaKnown RBP25.04■■□□□ 1.6
LINC01116-201ENST00000295549 WNT8AQ9H1J5 351 aa25.04■■□□□ 1.6
LINC01116-201ENST00000295549 ADAMTS10Q9H324 1103 aa25.04■■□□□ 1.6
LINC01116-201ENST00000295549 CDY2AQ9Y6F7 541 aa25.04■■□□□ 1.6
LINC01116-201ENST00000295549 HIP1RO75146 1068 aa25.03■■□□□ 1.6
LINC01116-201ENST00000295549 CTSHP09668 335 aa25.03■■□□□ 1.6
LINC01116-201ENST00000295549 MAPK7Q13164 816 aa25.03■■□□□ 1.6
LINC01116-201ENST00000295549 GIT2Q14161 759 aa25.03■■□□□ 1.6
LINC01116-201ENST00000295549 MFSD5Q6N075 450 aa25.03■■□□□ 1.6
LINC01116-201ENST00000295549 KRBA2Q6ZNG9 492 aa25.03■■□□□ 1.6
LINC01116-201ENST00000295549 ZNF410Q86VK4 478 aa25.03■■□□□ 1.6
LINC01116-201ENST00000295549 DDX12PQ92771 950 aa25.03■■□□□ 1.6
LINC01116-201ENST00000295549 REEP2Q9BRK0 252 aa25.03■■□□□ 1.6
LINC01116-201ENST00000295549 C17orf75Q9HAS0 396 aa25.03■■□□□ 1.6
LINC01116-201ENST00000295549 TRPV2Q9Y5S1 764 aa25.03■■□□□ 1.6
LINC01116-201ENST00000295549 NPHP3-ACAD11A0A0J9YXS1 232 aa25.03■■□□□ 1.6
LINC01116-201ENST00000295549 KRT18P05783 430 aaKnown RBP25.03■■□□□ 1.6
LINC01116-201ENST00000295549 LIG1P18858 919 aa25.03■■□□□ 1.6
LINC01116-201ENST00000295549 GLRA2P23416 452 aa25.03■■□□□ 1.6
LINC01116-201ENST00000295549 CRYBB1P53674 252 aaPredicted RBP25.03■■□□□ 1.6
LINC01116-201ENST00000295549 POU5F1BQ06416 359 aa25.03■■□□□ 1.6
LINC01116-201ENST00000295549 RAD51AP2Q09MP3 1159 aa25.03■■□□□ 1.6
LINC01116-201ENST00000295549 KIZQ2M2Z5 673 aa25.03■■□□□ 1.6
LINC01116-201ENST00000295549 CNNM4Q6P4Q7 775 aa25.03■■□□□ 1.6
LINC01116-201ENST00000295549 CNNM3Q8NE01 707 aa25.03■■□□□ 1.6
LINC01116-201ENST00000295549 ASAP3Q8TDY4 903 aa25.03■■□□□ 1.6
LINC01116-201ENST00000295549 PAGE5Q96GU1 130 aa25.03■■□□□ 1.6
LINC01116-201ENST00000295549 SQORQ9Y6N5 450 aa25.03■■□□□ 1.6
LINC01116-201ENST00000295549 EVPLQ92817 2033 aa25.02■■□□□ 1.6
LINC01116-201ENST00000295549 NR1I2O75469 434 aa25.02■■□□□ 1.6
LINC01116-201ENST00000295549 CCL23P55773 120 aa25.02■■□□□ 1.6
LINC01116-201ENST00000295549 KSR1Q8IVT5 923 aa25.02■■□□□ 1.6
LINC01116-201ENST00000295549 STAMQ92783 540 aa25.02■■□□□ 1.6
LINC01116-201ENST00000295549 DNAJC19Q96DA6 116 aa25.02■■□□□ 1.6
LINC01116-201ENST00000295549 TIGD1Q96MW7 591 aa25.02■■□□□ 1.6
LINC01116-201ENST00000295549 C7orf25Q9BPX7 421 aa25.02■■□□□ 1.6
LINC01116-201ENST00000295549 TRIM9Q9C026 710 aa25.02■■□□□ 1.6
LINC01116-201ENST00000295549 POLD4Q9HCU8 107 aa25.02■■□□□ 1.6
LINC01116-201ENST00000295549 ZMYND8Q9ULU4 1186 aaPredicted RBP25.02■■□□□ 1.6
LINC01116-201ENST00000295549 MYL1P05976 194 aa25.01■■□□□ 1.59
LINC01116-201ENST00000295549 SYN1P17600 705 aa25.01■■□□□ 1.59
LINC01116-201ENST00000295549 RFC2P35250 354 aa25.01■■□□□ 1.59
LINC01116-201ENST00000295549 ZNF131P52739 623 aa25.01■■□□□ 1.59
LINC01116-201ENST00000295549 MLLT1Q03111 559 aaPredicted RBP25.01■■□□□ 1.59
LINC01116-201ENST00000295549 TFDP1Q14186 410 aa25.01■■□□□ 1.59
LINC01116-201ENST00000295549 MBTPS1Q14703 1052 aa25.01■■□□□ 1.59
LINC01116-201ENST00000295549 PPP2R5AQ15172 486 aa25.01■■□□□ 1.59
LINC01116-201ENST00000295549 KANK3Q6NY19 840 aa25.01■■□□□ 1.59
LINC01116-201ENST00000295549 DYMQ7RTS9 669 aa25.01■■□□□ 1.59
LINC01116-201ENST00000295549 TMEM199Q8N511 208 aa25.01■■□□□ 1.59
LINC01116-201ENST00000295549 NLRP7Q8WX94 980 aa25.01■■□□□ 1.59
LINC01116-201ENST00000295549 CCDC34Q96HJ3 373 aa25.01■■□□□ 1.59
LINC01116-201ENST00000295549 IFT74Q96LB3 600 aa25.01■■□□□ 1.59
LINC01116-201ENST00000295549 NFKBIZQ9BYH8 718 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms