RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 LY9Q9HBG7 655 aa12.26□□□□□ -0.45
NPC1L1-201ENST00000289547 ADGRG1Q9Y653 693 aa12.26□□□□□ -0.45
NPC1L1-201ENST00000289547 EXOC3O60645 756 aa12.26□□□□□ -0.45
NPC1L1-201ENST00000289547 KIF23Q02241 960 aaPredicted RBP12.26□□□□□ -0.45
NPC1L1-201ENST00000289547 MAP3K21Q5TCX8 1036 aa12.26□□□□□ -0.45
NPC1L1-201ENST00000289547 SPZ1Q9BXG8 430 aa12.26□□□□□ -0.45
NPC1L1-201ENST00000289547 DAAM1Q9Y4D1 1078 aa12.26□□□□□ -0.45
NPC1L1-201ENST00000289547 PRPF6O94906 941 aaKnown RBP12.25□□□□□ -0.45
NPC1L1-201ENST00000289547 YWHAEP62258 255 aaKnown RBP12.25□□□□□ -0.45
NPC1L1-201ENST00000289547 ZBTB17Q13105 803 aa12.25□□□□□ -0.45
NPC1L1-201ENST00000289547 NUGGCQ68CJ6 796 aa12.25□□□□□ -0.45
NPC1L1-201ENST00000289547 ZNF449Q6P9G9 518 aa12.25□□□□□ -0.45
NPC1L1-201ENST00000289547 RIN2Q8WYP3 895 aaPredicted RBP12.25□□□□□ -0.45
NPC1L1-201ENST00000289547 HAUS1Q96CS2 278 aa12.25□□□□□ -0.45
NPC1L1-201ENST00000289547 RUNDC3BQ96NL0 473 aa12.25□□□□□ -0.45
NPC1L1-201ENST00000289547 CUEDC2Q9H467 287 aa12.25□□□□□ -0.45
NPC1L1-201ENST00000289547 TAF1DQ9H5J8 278 aaPredicted RBP12.25□□□□□ -0.45
NPC1L1-201ENST00000289547 ARHGEF37A1IGU5 675 aa12.25□□□□□ -0.45
NPC1L1-201ENST00000289547 WDR64B1ANS9 1081 aa12.25□□□□□ -0.45
NPC1L1-201ENST00000289547 K7ENM7 598 aa12.25□□□□□ -0.45
NPC1L1-201ENST00000289547 SERPINB6P35237 376 aa12.25□□□□□ -0.45
NPC1L1-201ENST00000289547 PPIL2Q13356 520 aa12.25□□□□□ -0.45
NPC1L1-201ENST00000289547 PPP1R21Q6ZMI0 780 aa12.25□□□□□ -0.45
NPC1L1-201ENST00000289547 OR6J1Q8NGC5 347 aa12.25□□□□□ -0.45
NPC1L1-201ENST00000289547 GOLPH3LQ9H4A5 285 aa12.25□□□□□ -0.45
NPC1L1-201ENST00000289547 MAP3K7O43318 606 aa12.25□□□□□ -0.45
NPC1L1-201ENST00000289547 ADCY8P40145 1251 aa12.25□□□□□ -0.45
NPC1L1-201ENST00000289547 STAT1P42224 750 aa12.25□□□□□ -0.45
NPC1L1-201ENST00000289547 PSMD2Q13200 908 aa12.25□□□□□ -0.45
NPC1L1-201ENST00000289547 ORC2Q13416 577 aaPredicted RBP12.25□□□□□ -0.45
NPC1L1-201ENST00000289547 DPH6Q7L8W6 267 aa12.25□□□□□ -0.45
NPC1L1-201ENST00000289547 ZC3H18Q86VM9 953 aaKnown RBP12.25□□□□□ -0.45
NPC1L1-201ENST00000289547 FAM178BQ8IXR5 827 aa12.25□□□□□ -0.45
NPC1L1-201ENST00000289547 CNOT6LQ96LI5 555 aaKnown RBP12.25□□□□□ -0.45
NPC1L1-201ENST00000289547 FHOD1Q9Y613 1164 aa12.25□□□□□ -0.45
NPC1L1-201ENST00000289547 TFRCP02786 760 aaKnown RBP12.25□□□□□ -0.45
NPC1L1-201ENST00000289547 GUCY1A3Q02108 690 aa12.25□□□□□ -0.45
NPC1L1-201ENST00000289547 CYP4A11Q02928 519 aa12.25□□□□□ -0.45
NPC1L1-201ENST00000289547 PTGDRQ13258 359 aa12.25□□□□□ -0.45
NPC1L1-201ENST00000289547 SGMS1Q86VZ5 419 aa12.25□□□□□ -0.45
NPC1L1-201ENST00000289547 DHX40Q8IX18 779 aaKnown RBP12.25□□□□□ -0.45
NPC1L1-201ENST00000289547 RASGRP4Q8TDF6 673 aa12.25□□□□□ -0.45
NPC1L1-201ENST00000289547 P3H4Q92791 437 aa12.25□□□□□ -0.45
NPC1L1-201ENST00000289547 SPATA33Q96N06 139 aa12.25□□□□□ -0.45
NPC1L1-201ENST00000289547 NHEJ1Q9H9Q4 299 aaPredicted RBP12.25□□□□□ -0.45
NPC1L1-201ENST00000289547 RNF180Q86T96 592 aa12.24□□□□□ -0.45
NPC1L1-201ENST00000289547 PDHXO00330 501 aa12.24□□□□□ -0.45
NPC1L1-201ENST00000289547 KRT5P13647 590 aa12.24□□□□□ -0.45
NPC1L1-201ENST00000289547 EEF1GP26641 437 aaKnown RBP12.24□□□□□ -0.45
NPC1L1-201ENST00000289547 BEND6Q5SZJ8 279 aaPredicted RBP12.24□□□□□ -0.45
NPC1L1-201ENST00000289547 SLC30A9Q6PML9 568 aa12.24□□□□□ -0.45
NPC1L1-201ENST00000289547 NEK9Q8TD19 979 aa12.24□□□□□ -0.45
NPC1L1-201ENST00000289547 OSBPL1AQ9BXW6 950 aa12.24□□□□□ -0.45
NPC1L1-201ENST00000289547 BATF3Q9NR55 127 aa12.24□□□□□ -0.45
NPC1L1-201ENST00000289547 PRR12Q9ULL5 1215 aa12.24□□□□□ -0.45
NPC1L1-201ENST00000289547 PGRMC1O00264 195 aaKnown RBP12.24□□□□□ -0.45
NPC1L1-201ENST00000289547 TNNC2P02585 160 aa12.24□□□□□ -0.45
NPC1L1-201ENST00000289547 MMEP08473 750 aa12.24□□□□□ -0.45
NPC1L1-201ENST00000289547 TXNP10599 105 aaKnown RBP12.24□□□□□ -0.45
NPC1L1-201ENST00000289547 GAP43P17677 238 aa12.24□□□□□ -0.45
NPC1L1-201ENST00000289547 ARHGAP44Q17R89 818 aa12.24□□□□□ -0.45
NPC1L1-201ENST00000289547 EP400NLQ6ZTU2 488 aa12.24□□□□□ -0.45
NPC1L1-201ENST00000289547 MAGOHBQ96A72 148 aaKnown RBP12.24□□□□□ -0.45
NPC1L1-201ENST00000289547 SETD1AO15047 1707 aaKnown RBP12.24□□□□□ -0.45
NPC1L1-201ENST00000289547 MYO1FO00160 1098 aa12.23□□□□□ -0.45
NPC1L1-201ENST00000289547 DNAJC8O75937 253 aaPredicted RBP12.23□□□□□ -0.45
NPC1L1-201ENST00000289547 DYNC1I2Q13409 638 aaKnown RBP12.23□□□□□ -0.45
NPC1L1-201ENST00000289547 IQCB1Q15051 598 aa12.23□□□□□ -0.45
NPC1L1-201ENST00000289547 NYAP1Q6ZVC0 841 aa12.23□□□□□ -0.45
NPC1L1-201ENST00000289547 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.23□□□□□ -0.45
NPC1L1-201ENST00000289547 KIFAP3Q92845 792 aa12.23□□□□□ -0.45
NPC1L1-201ENST00000289547 HDAC6Q9UBN7 1215 aa12.23□□□□□ -0.45
NPC1L1-201ENST00000289547 INO80B-WBP1J3KQ70 363 aa12.23□□□□□ -0.45
NPC1L1-201ENST00000289547 N4BP1O75113 896 aaKnown RBP12.23□□□□□ -0.45
NPC1L1-201ENST00000289547 GH1P01241 217 aa12.23□□□□□ -0.45
NPC1L1-201ENST00000289547 ARL1P40616 181 aaPredicted RBP12.23□□□□□ -0.45
NPC1L1-201ENST00000289547 ZBED6P86452 979 aa12.23□□□□□ -0.45
NPC1L1-201ENST00000289547 MTERF2Q49AM1 385 aa12.23□□□□□ -0.45
NPC1L1-201ENST00000289547 IL17RAQ96F46 866 aa12.23□□□□□ -0.45
NPC1L1-201ENST00000289547 FAM20AQ96MK3 541 aa12.23□□□□□ -0.45
NPC1L1-201ENST00000289547 MAP3K14Q99558 947 aa12.23□□□□□ -0.45
NPC1L1-201ENST00000289547 POLD4Q9HCU8 107 aa12.23□□□□□ -0.45
NPC1L1-201ENST00000289547 HAUS2Q9NVX0 235 aa12.23□□□□□ -0.45
NPC1L1-201ENST00000289547 AGTPBP1Q9UPW5 1226 aa12.23□□□□□ -0.45
NPC1L1-201ENST00000289547 KIAA1024Q9UPX6 916 aa12.23□□□□□ -0.45
NPC1L1-201ENST00000289547 RASSF10A6NK89 507 aa12.23□□□□□ -0.45
NPC1L1-201ENST00000289547 EIF3HO15372 352 aaKnown RBP eCLIP12.23□□□□□ -0.45
NPC1L1-201ENST00000289547 KRT19P08727 400 aa12.23□□□□□ -0.45
NPC1L1-201ENST00000289547 H2AFXP16104 143 aaPredicted RBP12.23□□□□□ -0.45
NPC1L1-201ENST00000289547 EIF4A3P38919 411 aaKnown RBP12.23□□□□□ -0.45
NPC1L1-201ENST00000289547 MSH2P43246 934 aa12.23□□□□□ -0.45
NPC1L1-201ENST00000289547 IRAK1P51617 712 aa12.23□□□□□ -0.45
NPC1L1-201ENST00000289547 RNASELQ05823 741 aaKnown RBP12.23□□□□□ -0.45
NPC1L1-201ENST00000289547 PROCA1Q8NCQ7 364 aaPredicted RBP12.23□□□□□ -0.45
NPC1L1-201ENST00000289547 BARHL2Q9NY43 387 aa12.23□□□□□ -0.45
NPC1L1-201ENST00000289547 INTUQ9ULD6 942 aa12.23□□□□□ -0.45
NPC1L1-201ENST00000289547 USTQ9Y2C2 406 aa12.23□□□□□ -0.45
NPC1L1-201ENST00000289547 SHPRHQ149N8 1683 aa12.23□□□□□ -0.45
NPC1L1-201ENST00000289547 ALS2Q96Q42 1657 aa12.23□□□□□ -0.45
NPC1L1-201ENST00000289547 PPP1R37O75864 691 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms