RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 GAP43P17677 238 aa17.21■□□□□ 0.35
SMAD6-201ENST00000288840 SMARCA1P28370 1054 aa17.21■□□□□ 0.35
SMAD6-201ENST00000288840 NF2P35240 595 aa17.21■□□□□ 0.35
SMAD6-201ENST00000288840 CEP55Q53EZ4 464 aa17.21■□□□□ 0.35
SMAD6-201ENST00000288840 PNMA8AQ86V59 439 aaPredicted RBP17.21■□□□□ 0.35
SMAD6-201ENST00000288840 RPUSD2Q8IZ73 545 aaKnown RBP17.21■□□□□ 0.35
SMAD6-201ENST00000288840 NAP1L3Q99457 506 aaPredicted RBP17.21■□□□□ 0.35
SMAD6-201ENST00000288840 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.21■□□□□ 0.354e-7■□□□□ 9
SMAD6-201ENST00000288840 HEMGNQ9BXL5 484 aa17.21■□□□□ 0.35
SMAD6-201ENST00000288840 RAB17Q9H0T7 212 aa17.21■□□□□ 0.35
SMAD6-201ENST00000288840 FAM53CQ9NYF3 392 aa17.21■□□□□ 0.35
SMAD6-201ENST00000288840 MYH6P13533 1939 aa17.21■□□□□ 0.35
SMAD6-201ENST00000288840 CTNND1O60716 968 aaKnown RBP17.21■□□□□ 0.35
SMAD6-201ENST00000288840 ACSL3O95573 720 aa17.21■□□□□ 0.35
SMAD6-201ENST00000288840 PRELPP51888 382 aa17.21■□□□□ 0.35
SMAD6-201ENST00000288840 NPEPPSP55786 919 aa17.21■□□□□ 0.35
SMAD6-201ENST00000288840 ARHGEF16Q5VV41 709 aa17.21■□□□□ 0.35
SMAD6-201ENST00000288840 USP20Q9Y2K6 914 aa17.21■□□□□ 0.35
SMAD6-201ENST00000288840 A0A1W2PRG0 241 aa17.2■□□□□ 0.34
SMAD6-201ENST00000288840 MEIS2O14770 477 aa17.2■□□□□ 0.34
SMAD6-201ENST00000288840 FMO5P49326 533 aa17.2■□□□□ 0.34
SMAD6-201ENST00000288840 LDHDQ86WU2 507 aa17.2■□□□□ 0.34
SMAD6-201ENST00000288840 WHAMMQ8TF30 809 aa17.2■□□□□ 0.34
SMAD6-201ENST00000288840 THAP2Q9H0W7 228 aa17.2■□□□□ 0.34
SMAD6-201ENST00000288840 PSD3Q9NYI0 1048 aa17.2■□□□□ 0.34
SMAD6-201ENST00000288840 POTEJP0CG39 1038 aa17.2■□□□□ 0.34
SMAD6-201ENST00000288840 ZKSCAN8Q15776 578 aaPredicted RBP17.2■□□□□ 0.34
SMAD6-201ENST00000288840 COL23A1Q86Y22 540 aaPredicted RBP17.2■□□□□ 0.34
SMAD6-201ENST00000288840 PASD1Q8IV76 773 aa17.2■□□□□ 0.34
SMAD6-201ENST00000288840 EDEM3Q9BZQ6 932 aa17.2■□□□□ 0.34
SMAD6-201ENST00000288840 DUOX1Q9NRD9 1551 aa17.2■□□□□ 0.34
SMAD6-201ENST00000288840 FOXN3O00409 490 aaPredicted RBP17.2■□□□□ 0.34
SMAD6-201ENST00000288840 POLRMTO00411 1230 aaKnown RBP17.2■□□□□ 0.34
SMAD6-201ENST00000288840 CYP26A1O43174 497 aa17.2■□□□□ 0.34
SMAD6-201ENST00000288840 SOX5P35711 763 aa17.2■□□□□ 0.34
SMAD6-201ENST00000288840 HP1BP3Q5SSJ5 553 aaPredicted RBP17.2■□□□□ 0.34
SMAD6-201ENST00000288840 PLA2G4FQ68DD2 849 aa17.2■□□□□ 0.34
SMAD6-201ENST00000288840 AADACL2Q6P093 401 aa17.2■□□□□ 0.34
SMAD6-201ENST00000288840 ZNF668Q96K58 619 aaPredicted RBP17.2■□□□□ 0.34
SMAD6-201ENST00000288840 NYAP2Q9P242 653 aa17.2■□□□□ 0.34
SMAD6-201ENST00000288840 ANKFY1Q9P2R3 1169 aa17.2■□□□□ 0.34
SMAD6-201ENST00000288840 GGT7Q9UJ14 662 aa17.2■□□□□ 0.34
SMAD6-201ENST00000288840 NOL4O94818 638 aa17.19■□□□□ 0.34
SMAD6-201ENST00000288840 IFNB1P01574 187 aa17.19■□□□□ 0.34
SMAD6-201ENST00000288840 EDRF1Q3B7T1 1238 aa17.19■□□□□ 0.34
SMAD6-201ENST00000288840 MUM1L1Q5H9M0 696 aa17.19■□□□□ 0.34
SMAD6-201ENST00000288840 HHIPL2Q6UWX4 724 aa17.19■□□□□ 0.34
SMAD6-201ENST00000288840 NLRX1Q86UT6 975 aa17.19■□□□□ 0.34
SMAD6-201ENST00000288840 MDM1Q8TC05 714 aa17.19■□□□□ 0.34
SMAD6-201ENST00000288840 THOC1Q96FV9 657 aaKnown RBP17.19■□□□□ 0.34
SMAD6-201ENST00000288840 ANKRD62A6NC57 917 aa17.19■□□□□ 0.34
SMAD6-201ENST00000288840 MAGEA9P43362 315 aa17.19■□□□□ 0.34
SMAD6-201ENST00000288840 NT5C2P49902 561 aa17.19■□□□□ 0.34
SMAD6-201ENST00000288840 CDK17Q00537 523 aa17.19■□□□□ 0.34
SMAD6-201ENST00000288840 PRAMEF18Q5VWM3 479 aa17.19■□□□□ 0.34
SMAD6-201ENST00000288840 LAMB4A4D0S4 1761 aa17.19■□□□□ 0.34
SMAD6-201ENST00000288840 CALCAP01258 141 aa17.19■□□□□ 0.34
SMAD6-201ENST00000288840 GLE1Q53GS7 698 aaKnown RBP17.19■□□□□ 0.34
SMAD6-201ENST00000288840 HGSNATQ68CP4 663 aa17.19■□□□□ 0.34
SMAD6-201ENST00000288840 TADA2BQ86TJ2 420 aa17.19■□□□□ 0.34
SMAD6-201ENST00000288840 JDP2Q8WYK2 163 aa17.19■□□□□ 0.34
SMAD6-201ENST00000288840 CEP170P1Q96L14 293 aa17.19■□□□□ 0.34
SMAD6-201ENST00000288840 WDR11Q9BZH6 1224 aa17.19■□□□□ 0.34
SMAD6-201ENST00000288840 MYH7P12883 1935 aa17.19■□□□□ 0.34
SMAD6-201ENST00000288840 EIF3HO15372 352 aaKnown RBP eCLIP17.18■□□□□ 0.34
SMAD6-201ENST00000288840 SEMA3FQ13275 785 aa17.18■□□□□ 0.34
SMAD6-201ENST00000288840 CNPY4Q8N129 248 aa17.18■□□□□ 0.34
SMAD6-201ENST00000288840 TPCN2Q8NHX9 752 aa17.18■□□□□ 0.34
SMAD6-201ENST00000288840 FAM163AQ96GL9 167 aaPredicted RBP17.18■□□□□ 0.34
SMAD6-201ENST00000288840 ATP6V1G3Q96LB4 118 aa17.18■□□□□ 0.34
SMAD6-201ENST00000288840 PLVAPQ9BX97 442 aa17.18■□□□□ 0.34
SMAD6-201ENST00000288840 LRP6O75581 1613 aa17.18■□□□□ 0.34
SMAD6-201ENST00000288840 SLC12A3P55017 1021 aa17.18■□□□□ 0.34
SMAD6-201ENST00000288840 NBPF9Q3BBW0 867 aa17.18■□□□□ 0.34
SMAD6-201ENST00000288840 EEPD1Q7L9B9 569 aa17.18■□□□□ 0.34
SMAD6-201ENST00000288840 AENQ8WTP8 325 aaKnown RBP17.18■□□□□ 0.34
SMAD6-201ENST00000288840 SLC20A1Q8WUM9 679 aa17.18■□□□□ 0.34
SMAD6-201ENST00000288840 POP1Q99575 1024 aaKnown RBP17.18■□□□□ 0.34
SMAD6-201ENST00000288840 GAKO14976 1311 aa17.18■□□□□ 0.34
SMAD6-201ENST00000288840 SOX10P56693 466 aa17.18■□□□□ 0.34
SMAD6-201ENST00000288840 C1orf54Q8WWF1 131 aa17.18■□□□□ 0.34
SMAD6-201ENST00000288840 CBWD1Q9BRT8 395 aa17.18■□□□□ 0.34
SMAD6-201ENST00000288840 PKD1L3Q7Z443 1732 aa17.17■□□□□ 0.34
SMAD6-201ENST00000288840 CETN2P41208 172 aa17.17■□□□□ 0.34
SMAD6-201ENST00000288840 ERVK-9P63128 1117 aa17.17■□□□□ 0.34
SMAD6-201ENST00000288840 MTMR3Q13615 1198 aa17.17■□□□□ 0.34
SMAD6-201ENST00000288840 LRRC14Q15048 493 aa17.17■□□□□ 0.34
SMAD6-201ENST00000288840 ZNF394Q53GI3 561 aa17.17■□□□□ 0.34
SMAD6-201ENST00000288840 SLC35C1Q96A29 364 aa17.17■□□□□ 0.34
SMAD6-201ENST00000288840 PI4K2AQ9BTU6 479 aa17.17■□□□□ 0.34
SMAD6-201ENST00000288840 NUP188Q5SRE5 1749 aa17.17■□□□□ 0.34
SMAD6-201ENST00000288840 A0A087WUV0 522 aaPredicted RBP17.17■□□□□ 0.34
SMAD6-201ENST00000288840 SLIT2O94813 1529 aa17.17■□□□□ 0.34
SMAD6-201ENST00000288840 ATF7P17544 494 aaPredicted RBP17.17■□□□□ 0.34
SMAD6-201ENST00000288840 FGFR4P22455 802 aa17.17■□□□□ 0.34
SMAD6-201ENST00000288840 LSP1P33241 339 aa17.17■□□□□ 0.34
SMAD6-201ENST00000288840 ADCY8P40145 1251 aa17.17■□□□□ 0.34
SMAD6-201ENST00000288840 TTMPQ5BVD1 217 aa17.17■□□□□ 0.34
SMAD6-201ENST00000288840 WDR44Q5JSH3 913 aa17.17■□□□□ 0.34
SMAD6-201ENST00000288840 MEI1Q5TIA1 1274 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms