RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 FGD4Q96M96 766 aa11.15□□□□□ -0.62
C9orf43-201ENST00000288462 SH2D3AQ9BRG2 576 aa11.15□□□□□ -0.62
C9orf43-201ENST00000288462 CRACR2AQ9BSW2 395 aa11.15□□□□□ -0.62
C9orf43-201ENST00000288462 HAUS4Q9H6D7 363 aa11.15□□□□□ -0.62
C9orf43-201ENST00000288462 GPRC5CQ9NQ84 441 aa11.15□□□□□ -0.62
C9orf43-201ENST00000288462 PDLIM7Q9NR12 457 aa11.15□□□□□ -0.62
C9orf43-201ENST00000288462 DNAJC25-GNG10A0A024R161 153 aa11.15□□□□□ -0.62
C9orf43-201ENST00000288462 PLEKP08567 350 aaPredicted RBP11.15□□□□□ -0.62
C9orf43-201ENST00000288462 UBA1P22314 1058 aaKnown RBP11.15□□□□□ -0.62
C9orf43-201ENST00000288462 RTP1P59025 263 aa11.15□□□□□ -0.62
C9orf43-201ENST00000288462 POLR2FP61218 127 aaKnown RBP11.15□□□□□ -0.62
C9orf43-201ENST00000288462 NCBP1Q09161 790 aaKnown RBP11.15□□□□□ -0.62
C9orf43-201ENST00000288462 MAPK8IP2Q13387 824 aaPredicted RBP11.15□□□□□ -0.62
C9orf43-201ENST00000288462 SNAPC2Q13487 334 aa11.15□□□□□ -0.62
C9orf43-201ENST00000288462 PPP2R5AQ15172 486 aa11.15□□□□□ -0.62
C9orf43-201ENST00000288462 FAM102BQ5T8I3 360 aa11.15□□□□□ -0.62
C9orf43-201ENST00000288462 HGSNATQ68CP4 663 aa11.15□□□□□ -0.62
C9orf43-201ENST00000288462 HAUS6Q7Z4H7 955 aa11.15□□□□□ -0.62
C9orf43-201ENST00000288462 SYCP3Q8IZU3 236 aa11.15□□□□□ -0.62
C9orf43-201ENST00000288462 ZNF526Q8TF50 670 aaPredicted RBP11.15□□□□□ -0.62
C9orf43-201ENST00000288462 KIFAP3Q92845 792 aa11.15□□□□□ -0.62
C9orf43-201ENST00000288462 R3HDMLQ9H3Y0 253 aa11.15□□□□□ -0.62
C9orf43-201ENST00000288462 C17orf75Q9HAS0 396 aa11.15□□□□□ -0.62
C9orf43-201ENST00000288462 FBXL5Q9UKA1 691 aa11.15□□□□□ -0.62
C9orf43-201ENST00000288462 PLXNA1Q9UIW2 1896 aa11.15□□□□□ -0.63
C9orf43-201ENST00000288462 IGKV6D-21A0A0A0MT36 114 aa11.14□□□□□ -0.63
C9orf43-201ENST00000288462 SSU72P8A0A1W2PR75 194 aa11.14□□□□□ -0.63
C9orf43-201ENST00000288462 ZNF263O14978 683 aa11.14□□□□□ -0.63
C9orf43-201ENST00000288462 TLR2O60603 784 aa11.14□□□□□ -0.63
C9orf43-201ENST00000288462 IPO7O95373 1038 aaKnown RBP11.14□□□□□ -0.63
C9orf43-201ENST00000288462 ABL1P00519 1130 aa11.14□□□□□ -0.63
C9orf43-201ENST00000288462 PON1P27169 355 aa11.14□□□□□ -0.63
C9orf43-201ENST00000288462 CYP2J2P51589 502 aa11.14□□□□□ -0.63
C9orf43-201ENST00000288462 KIF11P52732 1056 aa11.14□□□□□ -0.63
C9orf43-201ENST00000288462 PEX3P56589 373 aa11.14□□□□□ -0.63
C9orf43-201ENST00000288462 EXOC3L4Q17RC7 722 aa11.14□□□□□ -0.63
C9orf43-201ENST00000288462 ASTE1Q2TB18 679 aaPredicted RBP11.14□□□□□ -0.63
C9orf43-201ENST00000288462 XKR3Q5GH77 459 aa11.14□□□□□ -0.63
C9orf43-201ENST00000288462 ZNF710Q8N1W2 664 aa11.14□□□□□ -0.63
C9orf43-201ENST00000288462 TMEM161BQ8NDZ6 487 aa11.14□□□□□ -0.63
C9orf43-201ENST00000288462 MCPH1Q8NEM0 835 aa11.14□□□□□ -0.63
C9orf43-201ENST00000288462 SPIRE2Q8WWL2 714 aa11.14□□□□□ -0.63
C9orf43-201ENST00000288462 CEP170P1Q96L14 293 aa11.14□□□□□ -0.63
C9orf43-201ENST00000288462 SIX2Q9NPC8 291 aa11.14□□□□□ -0.63
C9orf43-201ENST00000288462 NLRC4Q9NPP4 1024 aa11.14□□□□□ -0.63
C9orf43-201ENST00000288462 XPNPEP1Q9NQW7 623 aa11.14□□□□□ -0.63
C9orf43-201ENST00000288462 SEPT9Q9UHD8 586 aaPredicted RBP11.14□□□□□ -0.63
C9orf43-201ENST00000288462 FRMD4BQ9Y2L6 1034 aa11.14□□□□□ -0.63
C9orf43-201ENST00000288462 MAFBQ9Y5Q3 323 aaPredicted RBP11.14□□□□□ -0.63
C9orf43-201ENST00000288462 MCM3APO60318 1980 aa11.14□□□□□ -0.63
C9orf43-201ENST00000288462 SLC16A4O15374 487 aa11.14□□□□□ -0.63
C9orf43-201ENST00000288462 DGAT1O75907 488 aa11.14□□□□□ -0.63
C9orf43-201ENST00000288462 URI1O94763 535 aaPredicted RBP11.14□□□□□ -0.63
C9orf43-201ENST00000288462 FARP2O94887 1054 aaPredicted RBP11.14□□□□□ -0.63
C9orf43-201ENST00000288462 EIF4A3P38919 411 aaKnown RBP11.14□□□□□ -0.63
C9orf43-201ENST00000288462 NPTX2P47972 431 aa11.14□□□□□ -0.63
C9orf43-201ENST00000288462 VAV2P52735 878 aa11.14□□□□□ -0.63
C9orf43-201ENST00000288462 APBA1Q02410 837 aa11.14□□□□□ -0.63
C9orf43-201ENST00000288462 SP4Q02446 784 aa11.14□□□□□ -0.63
C9orf43-201ENST00000288462 DMP1Q13316 513 aaPredicted RBP11.14□□□□□ -0.63
C9orf43-201ENST00000288462 ZNF569Q5MCW4 686 aa11.14□□□□□ -0.63
C9orf43-201ENST00000288462 KLHDC7AQ5VTJ3 777 aa11.14□□□□□ -0.63
C9orf43-201ENST00000288462 SFMBT2Q5VUG0 894 aa11.14□□□□□ -0.63
C9orf43-201ENST00000288462 TCERG1LQ5VWI1 586 aa11.14□□□□□ -0.63
C9orf43-201ENST00000288462 GBP6Q6ZN66 633 aa11.14□□□□□ -0.63
C9orf43-201ENST00000288462 SEPT14Q6ZU15 432 aa11.14□□□□□ -0.63
C9orf43-201ENST00000288462 CYFIP1Q7L576 1253 aa11.14□□□□□ -0.63
C9orf43-201ENST00000288462 MAP4K3Q8IVH8 894 aa11.14□□□□□ -0.63
C9orf43-201ENST00000288462 SHCBP1Q8NEM2 672 aa11.14□□□□□ -0.63
C9orf43-201ENST00000288462 GTF3C2Q8WUA4 911 aaPredicted RBP11.14□□□□□ -0.63
C9orf43-201ENST00000288462 BSNDQ8WZ55 320 aa11.14□□□□□ -0.63
C9orf43-201ENST00000288462 ANKRD7Q92527 254 aa11.14□□□□□ -0.63
C9orf43-201ENST00000288462 CCDC42Q96M95 316 aa11.14□□□□□ -0.63
C9orf43-201ENST00000288462 CYP26B1Q9NR63 512 aa11.14□□□□□ -0.63
C9orf43-201ENST00000288462 MYO6Q9UM54 1294 aa11.14□□□□□ -0.63
C9orf43-201ENST00000288462 MRFAP1Q9Y605 127 aa11.14□□□□□ -0.63
C9orf43-201ENST00000288462 RBAK-RBAKDNI3L0D1 243 aa11.13□□□□□ -0.63
C9orf43-201ENST00000288462 SOCS7O14512 581 aa11.13□□□□□ -0.63
C9orf43-201ENST00000288462 MAPK13O15264 365 aa11.13□□□□□ -0.63
C9orf43-201ENST00000288462 OATP04181 439 aa11.13□□□□□ -0.63
C9orf43-201ENST00000288462 SERPING1P05155 500 aa11.13□□□□□ -0.63
C9orf43-201ENST00000288462 UCHL3P15374 230 aa11.13□□□□□ -0.63
C9orf43-201ENST00000288462 SLC9A1P19634 815 aa11.13□□□□□ -0.63
C9orf43-201ENST00000288462 ATP4AP20648 1035 aa11.13□□□□□ -0.63
C9orf43-201ENST00000288462 MCCD1P59942 119 aaPredicted RBP11.13□□□□□ -0.63
C9orf43-201ENST00000288462 BFSP1Q12934 665 aa11.13□□□□□ -0.63
C9orf43-201ENST00000288462 KIAA1328Q86T90 577 aa11.13□□□□□ -0.63
C9orf43-201ENST00000288462 SLC35F6Q8N357 371 aa11.13□□□□□ -0.63
C9orf43-201ENST00000288462 MORC4Q8TE76 937 aa11.13□□□□□ -0.63
C9orf43-201ENST00000288462 KCNN1Q92952 543 aa11.13□□□□□ -0.63
C9orf43-201ENST00000288462 JAKMIP2Q96AA8 810 aa11.13□□□□□ -0.63
C9orf43-201ENST00000288462 NTPCRQ9BSD7 190 aaKnown RBP11.13□□□□□ -0.63
C9orf43-201ENST00000288462 MROH8Q9H579 483 aa11.13□□□□□ -0.63
C9orf43-201ENST00000288462 ATP6V0A4Q9HBG4 840 aa11.13□□□□□ -0.63
C9orf43-201ENST00000288462 ZNF302Q9NR11 478 aa11.13□□□□□ -0.63
C9orf43-201ENST00000288462 AIPL1Q9NZN9 384 aa11.13□□□□□ -0.63
C9orf43-201ENST00000288462 GCNT4Q9P109 453 aa11.13□□□□□ -0.63
C9orf43-201ENST00000288462 TRIM10Q9UDY6 481 aa11.13□□□□□ -0.63
C9orf43-201ENST00000288462 LOC102724159A0A0B4J2E5 919 aa11.12□□□□□ -0.63
C9orf43-201ENST00000288462 RCCD1A6NED2 376 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms