RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.33□□□□□ -0.44
SCLT1-201ENST00000281142 NOD2Q9HC29 1040 aa12.33□□□□□ -0.44
SCLT1-201ENST00000281142 C6orf50Q9HD87 102 aa12.33□□□□□ -0.44
SCLT1-201ENST00000281142 LUC7LQ9NQ29 371 aaKnown RBP12.33□□□□□ -0.44
SCLT1-201ENST00000281142 TLDC2A0PJX2 215 aa12.33□□□□□ -0.44
SCLT1-201ENST00000281142 MGRN1O60291 552 aa12.33□□□□□ -0.44
SCLT1-201ENST00000281142 PAEPP09466 180 aa12.33□□□□□ -0.44
SCLT1-201ENST00000281142 ZNF280AP59817 542 aaPredicted RBP12.33□□□□□ -0.44
SCLT1-201ENST00000281142 PPP4CP60510 307 aa12.33□□□□□ -0.44
SCLT1-201ENST00000281142 IFFO1Q0D2I5 559 aa12.33□□□□□ -0.44
SCLT1-201ENST00000281142 FAM26FQ5R3K3 315 aa12.33□□□□□ -0.44
SCLT1-201ENST00000281142 REXO1Q8N1G1 1221 aaKnown RBP12.33□□□□□ -0.44
SCLT1-201ENST00000281142 TPCN2Q8NHX9 752 aa12.33□□□□□ -0.44
SCLT1-201ENST00000281142 RBM46Q8TBY0 533 aaKnown RBP12.33□□□□□ -0.44
SCLT1-201ENST00000281142 MYOZ2Q9NPC6 264 aa12.33□□□□□ -0.44
SCLT1-201ENST00000281142 PANK4Q9NVE7 773 aa12.33□□□□□ -0.44
SCLT1-201ENST00000281142 AIPL1Q9NZN9 384 aa12.33□□□□□ -0.44
SCLT1-201ENST00000281142 STK17AQ9UEE5 414 aa12.33□□□□□ -0.44
SCLT1-201ENST00000281142 HDAC9Q9UKV0 1011 aa12.33□□□□□ -0.44
SCLT1-201ENST00000281142 EME2A4GXA9 379 aaPredicted RBP12.32□□□□□ -0.44
SCLT1-201ENST00000281142 E9PMD0 336 aa12.32□□□□□ -0.44
SCLT1-201ENST00000281142 EZRP15311 586 aaKnown RBP12.32□□□□□ -0.44
SCLT1-201ENST00000281142 CHN1P15882 459 aa12.32□□□□□ -0.44
SCLT1-201ENST00000281142 KCNH2Q12809 1159 aa12.32□□□□□ -0.44
SCLT1-201ENST00000281142 NAA25Q14CX7 972 aa12.32□□□□□ -0.44
SCLT1-201ENST00000281142 FAM133BQ5BKY9 247 aaKnown RBP12.32□□□□□ -0.44
SCLT1-201ENST00000281142 SAMD7Q7Z3H4 446 aa12.32□□□□□ -0.44
SCLT1-201ENST00000281142 ZNF483Q8TF39 744 aaPredicted RBP12.32□□□□□ -0.44
SCLT1-201ENST00000281142 ATP8B4Q8TF62 1192 aa12.32□□□□□ -0.44
SCLT1-201ENST00000281142 CHMP6Q96FZ7 201 aa12.32□□□□□ -0.44
SCLT1-201ENST00000281142 GPRC5DQ9NZD1 345 aa12.32□□□□□ -0.44
SCLT1-201ENST00000281142 NAGPAQ9UK23 515 aa12.32□□□□□ -0.44
SCLT1-201ENST00000281142 NAV1Q8NEY1 1877 aa12.32□□□□□ -0.44
SCLT1-201ENST00000281142 FRMPD2Q68DX3 1309 aaPredicted RBP12.32□□□□□ -0.44
SCLT1-201ENST00000281142 KLHL33A6NCF5 533 aa12.32□□□□□ -0.44
SCLT1-201ENST00000281142 DCAF8L1A6NGE4 600 aa12.32□□□□□ -0.44
SCLT1-201ENST00000281142 BAG3O95817 575 aa12.32□□□□□ -0.44
SCLT1-201ENST00000281142 CLTAP09496 248 aa12.32□□□□□ -0.44
SCLT1-201ENST00000281142 EPS15P42566 896 aa12.32□□□□□ -0.44
SCLT1-201ENST00000281142 ERMARDQ5T6L9 678 aa12.32□□□□□ -0.44
SCLT1-201ENST00000281142 CDC42EP5Q6NZY7 148 aa12.32□□□□□ -0.44
SCLT1-201ENST00000281142 ALKBH5Q6P6C2 394 aaKnown RBP12.32□□□□□ -0.44
SCLT1-201ENST00000281142 PEX26Q7Z412 305 aa12.32□□□□□ -0.44
SCLT1-201ENST00000281142 TBC1D1Q86TI0 1168 aaPredicted RBP12.32□□□□□ -0.44
SCLT1-201ENST00000281142 PNMA8AQ86V59 439 aaPredicted RBP12.32□□□□□ -0.44
SCLT1-201ENST00000281142 THOC1Q96FV9 657 aaKnown RBP12.32□□□□□ -0.44
SCLT1-201ENST00000281142 EPB41L4BQ9H329 900 aa12.32□□□□□ -0.44
SCLT1-201ENST00000281142 ZHX3Q9H4I2 956 aa12.32□□□□□ -0.44
SCLT1-201ENST00000281142 ATP6V0A4Q9HBG4 840 aa12.32□□□□□ -0.44
SCLT1-201ENST00000281142 RIC8AQ9NPQ8 531 aa12.32□□□□□ -0.44
SCLT1-201ENST00000281142 GLTPD2A6NH11 291 aa12.31□□□□□ -0.44
SCLT1-201ENST00000281142 SPDYE2BA6NHP3 402 aa12.31□□□□□ -0.44
SCLT1-201ENST00000281142 CCT8L1PA6NM43 557 aa12.31□□□□□ -0.44
SCLT1-201ENST00000281142 SPDYE6P0CI01 402 aa12.31□□□□□ -0.44
SCLT1-201ENST00000281142 IFI35P80217 286 aaPredicted RBP12.31□□□□□ -0.44
SCLT1-201ENST00000281142 RBM26Q5T8P6 1007 aaKnown RBP12.31□□□□□ -0.44
SCLT1-201ENST00000281142 DPY19L2Q6NUT2 758 aa12.31□□□□□ -0.44
SCLT1-201ENST00000281142 DPY19L2P1Q6NXN4 242 aa12.31□□□□□ -0.44
SCLT1-201ENST00000281142 MAPKAPK5Q8IW41 473 aa12.31□□□□□ -0.44
SCLT1-201ENST00000281142 LRRC34Q8IZ02 419 aa12.31□□□□□ -0.44
SCLT1-201ENST00000281142 ZNF444Q8N0Y2 327 aaPredicted RBP12.31□□□□□ -0.44
SCLT1-201ENST00000281142 TGFBRAP1Q8WUH2 860 aa12.31□□□□□ -0.44
SCLT1-201ENST00000281142 PBKQ96KB5 322 aa12.31□□□□□ -0.44
SCLT1-201ENST00000281142 FAM129AQ9BZQ8 928 aa12.31□□□□□ -0.44
SCLT1-201ENST00000281142 ADAM7Q9H2U9 754 aa12.31□□□□□ -0.44
SCLT1-201ENST00000281142 GOPCQ9HD26 462 aa12.31□□□□□ -0.44
SCLT1-201ENST00000281142 OSGEPQ9NPF4 335 aa12.31□□□□□ -0.44
SCLT1-201ENST00000281142 AGAP1Q9UPQ3 857 aa12.31□□□□□ -0.44
SCLT1-201ENST00000281142 DDX60LQ5H9U9 1706 aaKnown RBP12.31□□□□□ -0.44
SCLT1-201ENST00000281142 RASA1P20936 1047 aa12.31□□□□□ -0.44
SCLT1-201ENST00000281142 IFNAR2P48551 515 aa12.31□□□□□ -0.44
SCLT1-201ENST00000281142 CASP5P51878 434 aa12.31□□□□□ -0.44
SCLT1-201ENST00000281142 CACNB3P54284 484 aa12.31□□□□□ -0.44
SCLT1-201ENST00000281142 MYO1EQ12965 1108 aa12.31□□□□□ -0.44
SCLT1-201ENST00000281142 UBE2SQ16763 222 aa12.31□□□□□ -0.44
SCLT1-201ENST00000281142 NBPF9Q3BBW0 867 aa12.31□□□□□ -0.44
SCLT1-201ENST00000281142 TBC1D10BQ4KMP7 808 aaPredicted RBP12.31□□□□□ -0.44
SCLT1-201ENST00000281142 FAM43BQ6ZT52 329 aaPredicted RBP12.31□□□□□ -0.44
SCLT1-201ENST00000281142 SCFD1Q8WVM8 642 aa12.31□□□□□ -0.44
SCLT1-201ENST00000281142 GLG1Q92896 1179 aa12.31□□□□□ -0.44
SCLT1-201ENST00000281142 TLCD1Q96CP7 247 aa12.31□□□□□ -0.44
SCLT1-201ENST00000281142 ZBED3Q96IU2 234 aaPredicted RBP12.31□□□□□ -0.44
SCLT1-201ENST00000281142 ZNF317Q96PQ6 595 aaPredicted RBP12.31□□□□□ -0.44
SCLT1-201ENST00000281142 SPAG5Q96R06 1193 aa12.31□□□□□ -0.44
SCLT1-201ENST00000281142 NUCKS1Q9H1E3 243 aaKnown RBP12.31□□□□□ -0.44
SCLT1-201ENST00000281142 BCAS3Q9H6U6 928 aa12.31□□□□□ -0.44
SCLT1-201ENST00000281142 TDRD3Q9H7E2 651 aaKnown RBP12.31□□□□□ -0.44
SCLT1-201ENST00000281142 ERVK-5Q9HDB9 667 aa12.31□□□□□ -0.44
SCLT1-201ENST00000281142 WNT10BO00744 389 aa12.31□□□□□ -0.44
SCLT1-201ENST00000281142 DNAJC8O75937 253 aaPredicted RBP12.31□□□□□ -0.44
SCLT1-201ENST00000281142 FGGP02679 453 aa12.31□□□□□ -0.44
SCLT1-201ENST00000281142 MMEP08473 750 aa12.31□□□□□ -0.44
SCLT1-201ENST00000281142 GBP2P32456 591 aaPredicted RBP12.31□□□□□ -0.44
SCLT1-201ENST00000281142 TNNI2P48788 182 aa12.31□□□□□ -0.44
SCLT1-201ENST00000281142 ZNF211Q13398 564 aaPredicted RBP12.31□□□□□ -0.44
SCLT1-201ENST00000281142 PRPF4BQ13523 1007 aaKnown RBP12.31□□□□□ -0.44
SCLT1-201ENST00000281142 DLGAP5Q15398 846 aa12.31□□□□□ -0.44
SCLT1-201ENST00000281142 TMEM119Q4V9L6 283 aa12.31□□□□□ -0.44
SCLT1-201ENST00000281142 KRT79Q5XKE5 535 aa12.31□□□□□ -0.44
SCLT1-201ENST00000281142 AADACL2Q6P093 401 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms