RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 MKNK1Q9BUB5 465 aa24.24■■□□□ 1.47
CCDC7-201ENST00000277657 XPNPEP1Q9NQW7 623 aa24.24■■□□□ 1.47
CCDC7-201ENST00000277657 AGPAT5Q9NUQ2 364 aa24.24■■□□□ 1.47
CCDC7-201ENST00000277657 PPP2R2CQ9Y2T4 447 aa24.24■■□□□ 1.47
CCDC7-201ENST00000277657 ADORA2AP29274 412 aa24.23■■□□□ 1.47
CCDC7-201ENST00000277657 RTP1P59025 263 aa24.23■■□□□ 1.47
CCDC7-201ENST00000277657 KCNMA1Q12791 1236 aa24.23■■□□□ 1.47
CCDC7-201ENST00000277657 MYBPC2Q14324 1141 aa24.23■■□□□ 1.47
CCDC7-201ENST00000277657 CELF3Q5SZQ8 465 aaKnown RBP24.23■■□□□ 1.47
CCDC7-201ENST00000277657 CYP26C1Q6V0L0 522 aa24.23■■□□□ 1.47
CCDC7-201ENST00000277657 REXO1L1PQ8IX06 675 aa24.23■■□□□ 1.47
CCDC7-201ENST00000277657 SPIRE2Q8WWL2 714 aa24.23■■□□□ 1.47
CCDC7-201ENST00000277657 SEPT1Q8WYJ6 367 aa24.23■■□□□ 1.47
CCDC7-201ENST00000277657 ACCSQ96QU6 501 aa24.23■■□□□ 1.47
CCDC7-201ENST00000277657 NIFKQ9BYG3 293 aaKnown RBP24.23■■□□□ 1.47
CCDC7-201ENST00000277657 ZSCAN12O43309 604 aa24.22■■□□□ 1.47
CCDC7-201ENST00000277657 TNNT1P13805 278 aa24.22■■□□□ 1.47
CCDC7-201ENST00000277657 MTF1Q14872 753 aa24.22■■□□□ 1.47
CCDC7-201ENST00000277657 PTPN14Q15678 1187 aa24.22■■□□□ 1.47
CCDC7-201ENST00000277657 FBXO16Q8IX29 292 aaPredicted RBP24.22■■□□□ 1.47
CCDC7-201ENST00000277657 CCDC155Q8N6L0 562 aa24.22■■□□□ 1.47
CCDC7-201ENST00000277657 MLXIPQ9HAP2 919 aa24.22■■□□□ 1.47
CCDC7-201ENST00000277657 ATP6V0A4Q9HBG4 840 aa24.22■■□□□ 1.47
CCDC7-201ENST00000277657 CGNQ9P2M7 1197 aaKnown RBP24.22■■□□□ 1.47
CCDC7-201ENST00000277657 PSMC2P35998 433 aaKnown RBP24.21■■□□□ 1.47
CCDC7-201ENST00000277657 NPTX2P47972 431 aa24.21■■□□□ 1.47
CCDC7-201ENST00000277657 KCNH2Q12809 1159 aa24.21■■□□□ 1.47
CCDC7-201ENST00000277657 MEA1Q16626 185 aa24.21■■□□□ 1.47
CCDC7-201ENST00000277657 FAM110CQ1W6H9 321 aa24.21■■□□□ 1.47
CCDC7-201ENST00000277657 SYCP3Q8IZU3 236 aa24.21■■□□□ 1.47
CCDC7-201ENST00000277657 EPHB6O15197 1021 aa24.21■■□□□ 1.47
CCDC7-201ENST00000277657 SLC16A4O15374 487 aa24.21■■□□□ 1.47
CCDC7-201ENST00000277657 SMTNP53814 917 aa24.21■■□□□ 1.47
CCDC7-201ENST00000277657 DMP1Q13316 513 aaPredicted RBP24.21■■□□□ 1.47
CCDC7-201ENST00000277657 WDR59Q6PJI9 974 aa24.21■■□□□ 1.47
CCDC7-201ENST00000277657 ARMCX2Q7L311 632 aa24.21■■□□□ 1.47
CCDC7-201ENST00000277657 C12orf56Q8IXR9 622 aa24.21■■□□□ 1.47
CCDC7-201ENST00000277657 TMEM161BQ8NDZ6 487 aa24.21■■□□□ 1.47
CCDC7-201ENST00000277657 BSNDQ8WZ55 320 aa24.21■■□□□ 1.47
CCDC7-201ENST00000277657 HVCN1Q96D96 273 aa24.21■■□□□ 1.47
CCDC7-201ENST00000277657 CEP89Q96ST8 783 aa24.21■■□□□ 1.47
CCDC7-201ENST00000277657 EDEM3Q9BZQ6 932 aa24.21■■□□□ 1.47
CCDC7-201ENST00000277657 MMRN2Q9H8L6 949 aa24.21■■□□□ 1.47
CCDC7-201ENST00000277657 FAM207AQ9NSI2 230 aaPredicted RBP24.21■■□□□ 1.47
CCDC7-201ENST00000277657 XRCC5P13010 732 aaKnown RBP24.2■■□□□ 1.46
CCDC7-201ENST00000277657 TCF7P36402 384 aaPredicted RBP24.2■■□□□ 1.46
CCDC7-201ENST00000277657 STAT5BP51692 787 aa24.2■■□□□ 1.46
CCDC7-201ENST00000277657 SNRPFP62306 86 aaKnown RBP24.2■■□□□ 1.46
CCDC7-201ENST00000277657 MTERF2Q49AM1 385 aa24.2■■□□□ 1.46
CCDC7-201ENST00000277657 FAM160B1Q5W0V3 765 aa24.2■■□□□ 1.46
CCDC7-201ENST00000277657 ZNF467Q7Z7K2 595 aaPredicted RBP24.2■■□□□ 1.46
CCDC7-201ENST00000277657 RASAL3Q86YV0 1011 aa24.2■■□□□ 1.46
CCDC7-201ENST00000277657 ZNF397Q8NF99 534 aaPredicted RBP24.2■■□□□ 1.46
CCDC7-201ENST00000277657 GPR20Q99678 358 aa24.2■■□□□ 1.46
CCDC7-201ENST00000277657 AFPP02771 609 aaKnown RBP24.19■■□□□ 1.46
CCDC7-201ENST00000277657 SOX10P56693 466 aa24.19■■□□□ 1.46
CCDC7-201ENST00000277657 FAM186BQ8IYM0 893 aa24.19■■□□□ 1.46
CCDC7-201ENST00000277657 SLC35C1Q96A29 364 aa24.19■■□□□ 1.46
CCDC7-201ENST00000277657 DHX33Q9H6R0 707 aaKnown RBP24.19■■□□□ 1.46
CCDC7-201ENST00000277657 R3HCC1Q9Y3T6 440 aaKnown RBP24.19■■□□□ 1.46
CCDC7-201ENST00000277657 IVNS1ABPQ9Y6Y0 642 aa24.19■■□□□ 1.46
CCDC7-201ENST00000277657 KIF2AO00139 706 aaPredicted RBP24.19■■□□□ 1.46
CCDC7-201ENST00000277657 LGR5O75473 907 aa24.19■■□□□ 1.46
CCDC7-201ENST00000277657 TARBP2Q15633 366 aaKnown RBP24.19■■□□□ 1.46
CCDC7-201ENST00000277657 TSR1Q2NL82 804 aaKnown RBP24.19■■□□□ 1.46
CCDC7-201ENST00000277657 GPR142Q7Z601 462 aa24.19■■□□□ 1.46
CCDC7-201ENST00000277657 SCFD2Q8WU76 684 aa24.19■■□□□ 1.46
CCDC7-201ENST00000277657 DIS3Q9Y2L1 958 aaKnown RBP24.19■■□□□ 1.46
CCDC7-201ENST00000277657 ADGRG1Q9Y653 693 aa24.19■■□□□ 1.46
CCDC7-201ENST00000277657 HNRNPH3P31942 346 aaKnown RBP24.18■■□□□ 1.46
CCDC7-201ENST00000277657 GRB14Q14449 540 aa24.18■■□□□ 1.46
CCDC7-201ENST00000277657 TTLL4Q14679 1199 aa24.18■■□□□ 1.46
CCDC7-201ENST00000277657 EMC2Q15006 297 aa24.18■■□□□ 1.46
CCDC7-201ENST00000277657 HSDL1Q3SXM5 330 aa24.18■■□□□ 1.46
CCDC7-201ENST00000277657 NEK11Q8NG66 645 aa24.18■■□□□ 1.46
CCDC7-201ENST00000277657 CHP1Q99653 195 aa24.18■■□□□ 1.46
CCDC7-201ENST00000277657 DESI2Q9BSY9 194 aa24.18■■□□□ 1.46
CCDC7-201ENST00000277657 KMT5AQ9NQR1 393 aa24.18■■□□□ 1.46
CCDC7-201ENST00000277657 NRBP2Q9NSY0 501 aa24.18■■□□□ 1.46
CCDC7-201ENST00000277657 TBX20Q9UMR3 447 aa24.18■■□□□ 1.46
CCDC7-201ENST00000277657 FRMD4BQ9Y2L6 1034 aa24.18■■□□□ 1.46
CCDC7-201ENST00000277657 GOLGA6L9A6NEM1 432 aa24.17■■□□□ 1.46
CCDC7-201ENST00000277657 CCDC169A6NNP5 214 aa24.17■■□□□ 1.46
CCDC7-201ENST00000277657 CCDC175P0C221 793 aa24.17■■□□□ 1.46
CCDC7-201ENST00000277657 TXNP10599 105 aaKnown RBP24.17■■□□□ 1.46
CCDC7-201ENST00000277657 CYP2J2P51589 502 aa24.17■■□□□ 1.46
CCDC7-201ENST00000277657 POLGP54098 1239 aaPredicted RBP24.17■■□□□ 1.46
CCDC7-201ENST00000277657 MAP4K3Q8IVH8 894 aa24.17■■□□□ 1.46
CCDC7-201ENST00000277657 DHX37Q8IY37 1157 aaKnown RBP24.17■■□□□ 1.46
CCDC7-201ENST00000277657 PDGFCQ9NRA1 345 aa24.17■■□□□ 1.46
CCDC7-201ENST00000277657 NOL4O94818 638 aa24.17■■□□□ 1.46
CCDC7-201ENST00000277657 TUBB4AP04350 444 aa24.17■■□□□ 1.46
CCDC7-201ENST00000277657 ZNF157P51786 506 aaPredicted RBP24.17■■□□□ 1.46
CCDC7-201ENST00000277657 CDK17Q00537 523 aa24.17■■□□□ 1.46
CCDC7-201ENST00000277657 BAP1Q92560 729 aa24.17■■□□□ 1.46
CCDC7-201ENST00000277657 POLR3FQ9H1D9 316 aaPredicted RBP24.17■■□□□ 1.46
CCDC7-201ENST00000277657 ZCCHC17Q9NP64 241 aaKnown RBP24.17■■□□□ 1.46
CCDC7-201ENST00000277657 VTA1Q9NP79 307 aa24.17■■□□□ 1.46
CCDC7-201ENST00000277657 PLAGL2Q9UPG8 496 aa24.17■■□□□ 1.46
CCDC7-201ENST00000277657 ADGRA2Q96PE1 1338 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms