RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 DYNLL2Q96FJ2 89 aa13.85□□□□□ -0.19
HERC6-202ENST00000273960 PBKQ96KB5 322 aa13.85□□□□□ -0.19
HERC6-202ENST00000273960 RIC1Q4ADV7 1423 aa13.84□□□□□ -0.19
HERC6-202ENST00000273960 SPAG7O75391 227 aa13.84□□□□□ -0.19
HERC6-202ENST00000273960 MYBP10242 640 aa13.84□□□□□ -0.19
HERC6-202ENST00000273960 CALML3P27482 149 aa13.84□□□□□ -0.19
HERC6-202ENST00000273960 SERPINB4P48594 390 aa13.84□□□□□ -0.19
HERC6-202ENST00000273960 ZNF131P52739 623 aa13.84□□□□□ -0.19
HERC6-202ENST00000273960 PABPC3Q9H361 631 aaKnown RBP13.84□□□□□ -0.19
HERC6-202ENST00000273960 AMFRQ9UKV5 643 aa13.84□□□□□ -0.19
HERC6-202ENST00000273960 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.84□□□□□ -0.19
HERC6-202ENST00000273960 A6NHS1 94 aa13.84□□□□□ -0.19
HERC6-202ENST00000273960 AHCYL1O43865 530 aa13.84□□□□□ -0.19
HERC6-202ENST00000273960 GM2AP17900 193 aa13.84□□□□□ -0.19
HERC6-202ENST00000273960 TRAPPC10P48553 1259 aa13.84□□□□□ -0.19
HERC6-202ENST00000273960 RBM26Q5T8P6 1007 aaKnown RBP13.84□□□□□ -0.19
HERC6-202ENST00000273960 RASIP1Q5U651 963 aa13.84□□□□□ -0.19
HERC6-202ENST00000273960 ATP8B4Q8TF62 1192 aa13.84□□□□□ -0.19
HERC6-202ENST00000273960 CNKSR1Q969H4 720 aa13.84□□□□□ -0.19
HERC6-202ENST00000273960 TRIM7Q9C029 511 aa13.84□□□□□ -0.19
HERC6-202ENST00000273960 COL18A1P39060 1754 aa13.84□□□□□ -0.19
HERC6-202ENST00000273960 FESP07332 822 aa13.84□□□□□ -0.19
HERC6-202ENST00000273960 H2AFZP0C0S5 128 aa13.84□□□□□ -0.19
HERC6-202ENST00000273960 EXOC3L4Q17RC7 722 aa13.84□□□□□ -0.19
HERC6-202ENST00000273960 ZC2HC1CQ53FD0 456 aaPredicted RBP13.84□□□□□ -0.19
HERC6-202ENST00000273960 HERC4Q5GLZ8 1057 aaPredicted RBP13.84□□□□□ -0.19
HERC6-202ENST00000273960 H2AFVQ71UI9 128 aa13.84□□□□□ -0.19
HERC6-202ENST00000273960 PRUNE1Q86TP1 453 aa13.84□□□□□ -0.19
HERC6-202ENST00000273960 EXOC3L1Q86VI1 746 aa13.84□□□□□ -0.19
HERC6-202ENST00000273960 GLYCTKQ8IVS8 523 aa13.84□□□□□ -0.19
HERC6-202ENST00000273960 CCDC105Q8IYK2 499 aa13.84□□□□□ -0.19
HERC6-202ENST00000273960 MYOCDQ8IZQ8 938 aa13.84□□□□□ -0.19
HERC6-202ENST00000273960 ZNF513Q8N8E2 541 aaPredicted RBP13.84□□□□□ -0.19
HERC6-202ENST00000273960 OCEL1Q9H607 264 aa13.84□□□□□ -0.19
HERC6-202ENST00000273960 NAGPAQ9UK23 515 aa13.84□□□□□ -0.19
HERC6-202ENST00000273960 TMEM59LQ9UK28 342 aa13.84□□□□□ -0.19
HERC6-202ENST00000273960 PTDSS1P48651 473 aaKnown RBP13.83□□□□□ -0.2
HERC6-202ENST00000273960 TFAP4Q01664 338 aa13.83□□□□□ -0.2
HERC6-202ENST00000273960 KLC1Q07866 573 aa13.83□□□□□ -0.2
HERC6-202ENST00000273960 LRRC23Q53EV4 343 aaPredicted RBP13.83□□□□□ -0.2
HERC6-202ENST00000273960 LRRC55Q6ZSA7 311 aa13.83□□□□□ -0.2
HERC6-202ENST00000273960 TRIM74Q86UV6 250 aa13.83□□□□□ -0.2
HERC6-202ENST00000273960 TRIM73Q86UV7 250 aa13.83□□□□□ -0.2
HERC6-202ENST00000273960 JAMLQ86YT9 394 aa13.83□□□□□ -0.2
HERC6-202ENST00000273960 DNAJC9Q8WXX5 260 aa13.83□□□□□ -0.2
HERC6-202ENST00000273960 LARP4BQ92615 738 aaKnown RBP13.83□□□□□ -0.2
HERC6-202ENST00000273960 FGD4Q96M96 766 aa13.83□□□□□ -0.2
HERC6-202ENST00000273960 SRRM3A6NNA2 597 aaPredicted RBP13.83□□□□□ -0.2
HERC6-202ENST00000273960 ANKRD63C9JTQ0 380 aa13.83□□□□□ -0.2
HERC6-202ENST00000273960 KCNH2Q12809 1159 aa13.83□□□□□ -0.2
HERC6-202ENST00000273960 BNIP1Q12981 228 aa13.83□□□□□ -0.2
HERC6-202ENST00000273960 ZC3H12AQ5D1E8 599 aaKnown RBP13.83□□□□□ -0.2
HERC6-202ENST00000273960 AMIGO3Q86WK7 504 aa13.83□□□□□ -0.2
HERC6-202ENST00000273960 UTP4Q969X6 686 aaKnown RBP13.83□□□□□ -0.2
HERC6-202ENST00000273960 FAM84BQ96KN1 310 aaPredicted RBP13.83□□□□□ -0.2
HERC6-202ENST00000273960 ERP44Q9BS26 406 aa13.83□□□□□ -0.2
HERC6-202ENST00000273960 MYLK2Q9H1R3 596 aa13.83□□□□□ -0.2
HERC6-202ENST00000273960 EPB41L4BQ9H329 900 aa13.83□□□□□ -0.2
HERC6-202ENST00000273960 KCNMB3Q9NPA1 279 aa13.83□□□□□ -0.2
HERC6-202ENST00000273960 LMCD1Q9NZU5 365 aa13.83□□□□□ -0.2
HERC6-202ENST00000273960 BCL9LQ86UU0 1499 aa13.83□□□□□ -0.2
HERC6-202ENST00000273960 MYH7P12883 1935 aa13.83□□□□□ -0.2
HERC6-202ENST00000273960 WDR91A4D1P6 747 aa13.83□□□□□ -0.2
HERC6-202ENST00000273960 ANKRD33BA6NCL7 494 aa13.83□□□□□ -0.2
HERC6-202ENST00000273960 RNF8O76064 485 aa13.83□□□□□ -0.2
HERC6-202ENST00000273960 BRAFP15056 766 aa13.83□□□□□ -0.2
HERC6-202ENST00000273960 GNAT2P19087 354 aa13.83□□□□□ -0.2
HERC6-202ENST00000273960 PRPHP41219 470 aa13.83□□□□□ -0.2
HERC6-202ENST00000273960 RPL21P46778 160 aaKnown RBP13.83□□□□□ -0.2
HERC6-202ENST00000273960 ROR2Q01974 943 aaKnown RBP13.83□□□□□ -0.2
HERC6-202ENST00000273960 DNAJC3Q13217 504 aa13.83□□□□□ -0.2
HERC6-202ENST00000273960 PICALMQ13492 652 aa13.83□□□□□ -0.2
HERC6-202ENST00000273960 TBCKQ8TEA7 893 aa13.83□□□□□ -0.2
HERC6-202ENST00000273960 DYDC2Q96IM9 177 aa13.83□□□□□ -0.2
HERC6-202ENST00000273960 FAM118BQ9BPY3 351 aa13.83□□□□□ -0.2
HERC6-202ENST00000273960 CCSER1Q9C0I3 900 aa13.83□□□□□ -0.2
HERC6-202ENST00000273960 RHBDL2Q9NX52 303 aa13.83□□□□□ -0.2
HERC6-202ENST00000273960 ARMCX3Q9UH62 379 aaPredicted RBP13.83□□□□□ -0.2
HERC6-202ENST00000273960 MARCKSL1P49006 195 aa13.82□□□□□ -0.2
HERC6-202ENST00000273960 EIF3BP55884 814 aaKnown RBP13.82□□□□□ -0.2
HERC6-202ENST00000273960 SLC44A5Q8NCS7 719 aa13.82□□□□□ -0.2
HERC6-202ENST00000273960 PNMA1Q8ND90 353 aa13.82□□□□□ -0.2
HERC6-202ENST00000273960 C1orf131Q8NDD1 294 aaKnown RBP13.82□□□□□ -0.2
HERC6-202ENST00000273960 ACTRT1Q8TDG2 376 aa13.82□□□□□ -0.2
HERC6-202ENST00000273960 UBE2OQ9C0C9 1292 aaKnown RBP13.82□□□□□ -0.2
HERC6-202ENST00000273960 SLCO1B3Q9NPD5 702 aa13.82□□□□□ -0.2
HERC6-202ENST00000273960 PCMTD2Q9NV79 361 aa13.82□□□□□ -0.2
HERC6-202ENST00000273960 ARL2BPQ9Y2Y0 163 aa13.82□□□□□ -0.2
HERC6-202ENST00000273960 TNS2Q63HR2 1409 aa13.82□□□□□ -0.2
HERC6-202ENST00000273960 ECM29Q5VYK3 1845 aa13.82□□□□□ -0.2
HERC6-202ENST00000273960 SP100P23497 879 aaPredicted RBP13.82□□□□□ -0.2
HERC6-202ENST00000273960 GALCP54803 685 aa13.82□□□□□ -0.2
HERC6-202ENST00000273960 FKBP3Q00688 224 aaKnown RBP13.82□□□□□ -0.2
HERC6-202ENST00000273960 MGAT5Q09328 741 aa13.82□□□□□ -0.2
HERC6-202ENST00000273960 AUHQ13825 339 aaKnown RBP13.82□□□□□ -0.2
HERC6-202ENST00000273960 NFIXQ14938 502 aa13.82□□□□□ -0.2
HERC6-202ENST00000273960 ARHGAP44Q17R89 818 aa13.82□□□□□ -0.2
HERC6-202ENST00000273960 TSNAXIP1Q2TAA8 658 aa13.82□□□□□ -0.2
HERC6-202ENST00000273960 KIAA1755Q5JYT7 1200 aa13.82□□□□□ -0.2
HERC6-202ENST00000273960 ARHGAP22Q7Z5H3 698 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms