RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 TCERG1LQ5VWI1 586 aa18.21■□□□□ 0.51
CCDC40-201ENST00000269318 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.21■□□□□ 0.51
CCDC40-201ENST00000269318 OTUD6AQ7L8S5 288 aa18.21■□□□□ 0.51
CCDC40-201ENST00000269318 TRMT1LQ7Z2T5 733 aaKnown RBP18.21■□□□□ 0.51
CCDC40-201ENST00000269318 HAUS6Q7Z4H7 955 aa18.21■□□□□ 0.51
CCDC40-201ENST00000269318 NCAPG2Q86XI2 1143 aa18.21■□□□□ 0.51
CCDC40-201ENST00000269318 SYCP3Q8IZU3 236 aa18.21■□□□□ 0.51
CCDC40-201ENST00000269318 FAM133AQ8N9E0 248 aa18.21■□□□□ 0.51
CCDC40-201ENST00000269318 ACCSQ96QU6 501 aa18.21■□□□□ 0.51
CCDC40-201ENST00000269318 GUCA1BQ9UMX6 200 aa18.21■□□□□ 0.51
CCDC40-201ENST00000269318 IGSF9BQ9UPX0 1349 aa18.21■□□□□ 0.51
CCDC40-201ENST00000269318 SUPT20HL2P0C7V6 817 aa18.21■□□□□ 0.5
CCDC40-201ENST00000269318 ACTN1P12814 892 aa18.21■□□□□ 0.5
CCDC40-201ENST00000269318 VAV2P52735 878 aa18.21■□□□□ 0.5
CCDC40-201ENST00000269318 CCDC122Q5T0U0 273 aa18.21■□□□□ 0.5
CCDC40-201ENST00000269318 KLHDC7AQ5VTJ3 777 aa18.21■□□□□ 0.5
CCDC40-201ENST00000269318 SFMBT2Q5VUG0 894 aa18.21■□□□□ 0.5
CCDC40-201ENST00000269318 KIAA1328Q86T90 577 aa18.21■□□□□ 0.5
CCDC40-201ENST00000269318 C12orf56Q8IXR9 622 aa18.21■□□□□ 0.5
CCDC40-201ENST00000269318 JAKMIP2Q96AA8 810 aa18.21■□□□□ 0.5
CCDC40-201ENST00000269318 PAGR1Q9BTK6 254 aa18.21■□□□□ 0.5
CCDC40-201ENST00000269318 R3HDMLQ9H3Y0 253 aa18.21■□□□□ 0.5
CCDC40-201ENST00000269318 SIX2Q9NPC8 291 aa18.21■□□□□ 0.5
CCDC40-201ENST00000269318 PDLIM7Q9NR12 457 aa18.21■□□□□ 0.5
CCDC40-201ENST00000269318 AIPL1Q9NZN9 384 aa18.21■□□□□ 0.5
CCDC40-201ENST00000269318 FRMD4BQ9Y2L6 1034 aa18.21■□□□□ 0.5
CCDC40-201ENST00000269318 SCN4AP35499 1836 aa18.2■□□□□ 0.5
CCDC40-201ENST00000269318 ARID2Q68CP9 1835 aa18.2■□□□□ 0.5
CCDC40-201ENST00000269318 POTEB2H3BUK9 544 aa18.2■□□□□ 0.5
CCDC40-201ENST00000269318 ATG7O95352 703 aa18.2■□□□□ 0.5
CCDC40-201ENST00000269318 PEX3P56589 373 aa18.2■□□□□ 0.5
CCDC40-201ENST00000269318 LDLRAD1Q5T700 205 aa18.2■□□□□ 0.5
CCDC40-201ENST00000269318 FAM102BQ5T8I3 360 aa18.2■□□□□ 0.5
CCDC40-201ENST00000269318 GBP6Q6ZN66 633 aa18.2■□□□□ 0.5
CCDC40-201ENST00000269318 ARMC9Q7Z3E5 817 aa18.2■□□□□ 0.5
CCDC40-201ENST00000269318 SLC17A8Q8NDX2 589 aa18.2■□□□□ 0.5
CCDC40-201ENST00000269318 CEP170P1Q96L14 293 aa18.2■□□□□ 0.5
CCDC40-201ENST00000269318 TXNRD2Q9NNW7 524 aa18.2■□□□□ 0.5
CCDC40-201ENST00000269318 CGNQ9P2M7 1197 aaKnown RBP18.2■□□□□ 0.5
CCDC40-201ENST00000269318 RBPJLQ9UBG7 517 aa18.2■□□□□ 0.5
CCDC40-201ENST00000269318 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.2■□□□□ 0.5
CCDC40-201ENST00000269318 FBXL5Q9UKA1 691 aa18.2■□□□□ 0.5
CCDC40-201ENST00000269318 V9GYY5 206 aaPredicted RBP18.2■□□□□ 0.5
CCDC40-201ENST00000269318 CTAGE9A4FU28 777 aa18.19■□□□□ 0.5
CCDC40-201ENST00000269318 SERPING1P05155 500 aa18.19■□□□□ 0.5
CCDC40-201ENST00000269318 UCHL3P15374 230 aa18.19■□□□□ 0.5
CCDC40-201ENST00000269318 PRKCEQ02156 737 aa18.19■□□□□ 0.5
CCDC40-201ENST00000269318 SP4Q02446 784 aa18.19■□□□□ 0.5
CCDC40-201ENST00000269318 PPP2R5AQ15172 486 aa18.19■□□□□ 0.5
CCDC40-201ENST00000269318 SPA17Q15506 151 aa18.19■□□□□ 0.5
CCDC40-201ENST00000269318 EAPPQ56P03 285 aaPredicted RBP18.19■□□□□ 0.5
CCDC40-201ENST00000269318 GPAT2Q6NUI2 795 aa18.19■□□□□ 0.5
CCDC40-201ENST00000269318 MIS18BP1Q6P0N0 1132 aa18.19■□□□□ 0.5
CCDC40-201ENST00000269318 CYFIP1Q7L576 1253 aa18.19■□□□□ 0.5
CCDC40-201ENST00000269318 GPIHBP1Q8IV16 184 aa18.19■□□□□ 0.5
CCDC40-201ENST00000269318 ZNF526Q8TF50 670 aaPredicted RBP18.19■□□□□ 0.5
CCDC40-201ENST00000269318 CARD6Q9BX69 1037 aa18.19■□□□□ 0.5
CCDC40-201ENST00000269318 LRRC37A2A6NM11 1700 aa18.19■□□□□ 0.5
CCDC40-201ENST00000269318 SYNGAP1Q96PV0 1343 aa18.19■□□□□ 0.5
CCDC40-201ENST00000269318 TISP43B9A030 160 aa18.19■□□□□ 0.5
CCDC40-201ENST00000269318 SLC16A4O15374 487 aa18.19■□□□□ 0.5
CCDC40-201ENST00000269318 KRT86O43790 486 aa18.19■□□□□ 0.5
CCDC40-201ENST00000269318 SORBS3O60504 671 aa18.19■□□□□ 0.5
CCDC40-201ENST00000269318 SLC25A27O95847 323 aa18.19■□□□□ 0.5
CCDC40-201ENST00000269318 GJA5P36382 358 aa18.19■□□□□ 0.5
CCDC40-201ENST00000269318 SNRPFP62306 86 aaKnown RBP18.19■□□□□ 0.5
CCDC40-201ENST00000269318 SLC9C1Q4G0N8 1177 aa18.19■□□□□ 0.5
CCDC40-201ENST00000269318 SEPT14Q6ZU15 432 aa18.19■□□□□ 0.5
CCDC40-201ENST00000269318 FASTKD5Q7L8L6 764 aaKnown RBP18.19■□□□□ 0.5
CCDC40-201ENST00000269318 TMEM161BQ8NDZ6 487 aa18.19■□□□□ 0.5
CCDC40-201ENST00000269318 NTPCRQ9BSD7 190 aaKnown RBP18.19■□□□□ 0.5
CCDC40-201ENST00000269318 DEF6Q9H4E7 631 aa18.19■□□□□ 0.5
CCDC40-201ENST00000269318 PCDHA13Q9Y5I0 950 aa18.19■□□□□ 0.5
CCDC40-201ENST00000269318 IQCA1LA6NCM1 817 aa18.18■□□□□ 0.5
CCDC40-201ENST00000269318 RBAK-RBAKDNI3L0D1 243 aa18.18■□□□□ 0.5
CCDC40-201ENST00000269318 AKR1B10O60218 316 aa18.18■□□□□ 0.5
CCDC40-201ENST00000269318 EXOC3O60645 756 aa18.18■□□□□ 0.5
CCDC40-201ENST00000269318 TADA3O75528 432 aa18.18■□□□□ 0.5
CCDC40-201ENST00000269318 NPTX2P47972 431 aa18.18■□□□□ 0.5
CCDC40-201ENST00000269318 FMO5P49326 533 aa18.18■□□□□ 0.5
CCDC40-201ENST00000269318 ELF2Q15723 593 aa18.18■□□□□ 0.5
CCDC40-201ENST00000269318 SPIRE2Q8WWL2 714 aa18.18■□□□□ 0.5
CCDC40-201ENST00000269318 BSNDQ8WZ55 320 aa18.18■□□□□ 0.5
CCDC40-201ENST00000269318 KIFAP3Q92845 792 aa18.18■□□□□ 0.5
CCDC40-201ENST00000269318 NAPGQ99747 312 aaPredicted RBP18.18■□□□□ 0.5
CCDC40-201ENST00000269318 IFIH1Q9BYX4 1025 aaKnown RBP18.18■□□□□ 0.5
CCDC40-201ENST00000269318 C17orf75Q9HAS0 396 aa18.18■□□□□ 0.5
CCDC40-201ENST00000269318 CYP26B1Q9NR63 512 aa18.18■□□□□ 0.5
CCDC40-201ENST00000269318 GCNT4Q9P109 453 aa18.18■□□□□ 0.5
CCDC40-201ENST00000269318 MAFBQ9Y5Q3 323 aaPredicted RBP18.18■□□□□ 0.5
CCDC40-201ENST00000269318 FHOD1Q9Y613 1164 aa18.18■□□□□ 0.5
CCDC40-201ENST00000269318 DGAT1O75907 488 aa18.17■□□□□ 0.5
CCDC40-201ENST00000269318 ATP4AP20648 1035 aa18.17■□□□□ 0.5
CCDC40-201ENST00000269318 UBA1P22314 1058 aaKnown RBP18.17■□□□□ 0.5
CCDC40-201ENST00000269318 BFSP1Q12934 665 aa18.17■□□□□ 0.5
CCDC40-201ENST00000269318 RAPGEF1Q13905 1077 aa18.17■□□□□ 0.5
CCDC40-201ENST00000269318 Q3C1V9 767 aa18.17■□□□□ 0.5
CCDC40-201ENST00000269318 XKR3Q5GH77 459 aa18.17■□□□□ 0.5
CCDC40-201ENST00000269318 HVCN1Q96D96 273 aa18.17■□□□□ 0.5
CCDC40-201ENST00000269318 FGD4Q96M96 766 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms