RNA–Protein interactions for RNA: ENST00000268603.8

CDH11-201, Transcript of cadherin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH11, Length 6,857 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-201ENST00000268603 FANCBQ8NB91 859 aa13.43□□□□□ -0.26
CDH11-201ENST00000268603 SH3GL2Q99962 352 aa13.43□□□□□ -0.26
CDH11-201ENST00000268603 KRT17Q04695 432 aa13.43□□□□□ -0.26
CDH11-201ENST00000268603 CHRNDQ07001 517 aa13.43□□□□□ -0.26
CDH11-201ENST00000268603 ALFQ53S48 1182 aa13.43□□□□□ -0.26
CDH11-201ENST00000268603 TRIM69Q86WT6 500 aa13.43□□□□□ -0.26
CDH11-201ENST00000268603 CLIC6Q96NY7 704 aa13.43□□□□□ -0.26
CDH11-201ENST00000268603 GTF2A1LQ9UNN4 478 aa13.43□□□□□ -0.26
CDH11-201ENST00000268603 ZNF804BA4D1E1 1349 aa13.43□□□□□ -0.26
CDH11-201ENST00000268603 RALAP11233 206 aa13.43□□□□□ -0.26
CDH11-201ENST00000268603 BEST2Q8NFU1 509 aa13.43□□□□□ -0.26
CDH11-201ENST00000268603 ARHGAP26Q9UNA1 814 aa13.43□□□□□ -0.26
CDH11-201ENST00000268603 DTNAQ9Y4J8 743 aa13.43□□□□□ -0.26
CDH11-201ENST00000268603 PRR23AA6NEV1 266 aa13.43□□□□□ -0.26
CDH11-201ENST00000268603 GOLGA8MH3BSY2 632 aa13.43□□□□□ -0.26
CDH11-201ENST00000268603 OR6P1Q8NGX9 317 aa13.43□□□□□ -0.26
CDH11-201ENST00000268603 HES6Q96HZ4 224 aa13.43□□□□□ -0.26
CDH11-201ENST00000268603 FOPNLQ96NB1 174 aa13.43□□□□□ -0.26
CDH11-201ENST00000268603 TOPORSQ9NS56 1045 aaPredicted RBP13.43□□□□□ -0.26
CDH11-201ENST00000268603 MAP3K20Q9NYL2 800 aaKnown RBP13.43□□□□□ -0.26
CDH11-201ENST00000268603 A0A0G2JND7 137 aa13.43□□□□□ -0.26
CDH11-201ENST00000268603 KPNA7A9QM74 516 aa13.43□□□□□ -0.26
CDH11-201ENST00000268603 COPEO14579 308 aa13.43□□□□□ -0.26
CDH11-201ENST00000268603 C2orf54Q08AI8 447 aa13.43□□□□□ -0.26
CDH11-201ENST00000268603 ASPRV1Q53RT3 343 aa13.43□□□□□ -0.26
CDH11-201ENST00000268603 FBXO18Q8NFZ0 1043 aa13.43□□□□□ -0.26
CDH11-201ENST00000268603 PPARGC1AQ9UBK2 798 aaKnown RBP13.43□□□□□ -0.26
CDH11-201ENST00000268603 ALDH1A2O94788 518 aa13.42□□□□□ -0.26
CDH11-201ENST00000268603 CXCR5P32302 372 aa13.42□□□□□ -0.26
CDH11-201ENST00000268603 RANBP1P43487 201 aa13.42□□□□□ -0.26
CDH11-201ENST00000268603 ZNF235Q14590 738 aa13.42□□□□□ -0.26
CDH11-201ENST00000268603 PASD1Q8IV76 773 aa13.42□□□□□ -0.26
CDH11-201ENST00000268603 EFHBQ8N7U6 833 aa13.42□□□□□ -0.26
CDH11-201ENST00000268603 FAM161BQ96MY7 647 aa13.42□□□□□ -0.26
CDH11-201ENST00000268603 POLE3Q9NRF9 147 aa13.42□□□□□ -0.26
CDH11-201ENST00000268603 USE1Q9NZ43 259 aa13.42□□□□□ -0.26
CDH11-201ENST00000268603 TJP2Q9UDY2 1190 aa13.42□□□□□ -0.26
CDH11-201ENST00000268603 GUCA1AP43080 201 aaPredicted RBP13.42□□□□□ -0.26
CDH11-201ENST00000268603 FSCBQ5H9T9 825 aa13.42□□□□□ -0.26
CDH11-201ENST00000268603 OOSP2Q86WS3 158 aa13.42□□□□□ -0.26
CDH11-201ENST00000268603 RASGRP4Q8TDF6 673 aa13.42□□□□□ -0.26
CDH11-201ENST00000268603 PLEKHA8Q96JA3 519 aa13.42□□□□□ -0.26
CDH11-201ENST00000268603 ZNF341Q9BYN7 854 aa13.42□□□□□ -0.26
CDH11-201ENST00000268603 APOBEC2Q9Y235 224 aaKnown RBP13.42□□□□□ -0.26
CDH11-201ENST00000268603 PPP2R2CQ9Y2T4 447 aa13.42□□□□□ -0.26
CDH11-201ENST00000268603 RALGAPBQ86X10 1494 aa13.42□□□□□ -0.26
CDH11-201ENST00000268603 PARD3Q8TEW0 1356 aa13.42□□□□□ -0.26
CDH11-201ENST00000268603 ZMYND10O75800 440 aa13.42□□□□□ -0.26
CDH11-201ENST00000268603 ADORA2BP29275 332 aa13.42□□□□□ -0.26
CDH11-201ENST00000268603 GRIK1P39086 918 aa13.42□□□□□ -0.26
CDH11-201ENST00000268603 PDIK1LQ8N165 341 aa13.42□□□□□ -0.26
CDH11-201ENST00000268603 MRPS26Q9BYN8 205 aaKnown RBP13.42□□□□□ -0.26
CDH11-201ENST00000268603 NUP153P49790 1475 aaKnown RBP13.42□□□□□ -0.26
CDH11-201ENST00000268603 MEFVO15553 781 aaPredicted RBP13.42□□□□□ -0.26
CDH11-201ENST00000268603 CTNND1O60716 968 aaKnown RBP13.42□□□□□ -0.26
CDH11-201ENST00000268603 DARSP14868 501 aaKnown RBP13.42□□□□□ -0.26
CDH11-201ENST00000268603 SLC16A1P53985 500 aa13.42□□□□□ -0.26
CDH11-201ENST00000268603 HDLBPQ00341 1268 aaKnown RBP13.42□□□□□ -0.26
CDH11-201ENST00000268603 CIAPIN1Q6FI81 312 aa13.42□□□□□ -0.26
CDH11-201ENST00000268603 CENPTQ96BT3 561 aa13.42□□□□□ -0.26
CDH11-201ENST00000268603 ZNF668Q96K58 619 aaPredicted RBP13.42□□□□□ -0.26
CDH11-201ENST00000268603 PALD1Q9ULE6 856 aa13.42□□□□□ -0.26
CDH11-201ENST00000268603 ZMYM6O95789 1325 aa13.41□□□□□ -0.26
CDH11-201ENST00000268603 SRGAP2O75044 1071 aa13.41□□□□□ -0.26
CDH11-201ENST00000268603 GSPT1P15170 499 aaKnown RBP13.41□□□□□ -0.26
CDH11-201ENST00000268603 RFX3P48380 749 aa13.41□□□□□ -0.26
CDH11-201ENST00000268603 FGD2Q7Z6J4 655 aa13.41□□□□□ -0.26
CDH11-201ENST00000268603 DDX50Q9BQ39 737 aaKnown RBP13.41□□□□□ -0.26
CDH11-201ENST00000268603 MAPK13O15264 365 aa13.41□□□□□ -0.26
CDH11-201ENST00000268603 FTCDO95954 541 aa13.41□□□□□ -0.26
CDH11-201ENST00000268603 ADCK1Q86TW2 530 aa13.41□□□□□ -0.26
CDH11-201ENST00000268603 CCDC17Q96LX7 622 aa13.41□□□□□ -0.26
CDH11-201ENST00000268603 TUBGCP2Q9BSJ2 902 aa13.41□□□□□ -0.26
CDH11-201ENST00000268603 FAM129AQ9BZQ8 928 aa13.41□□□□□ -0.26
CDH11-201ENST00000268603 BABAM1Q9NWV8 329 aa13.41□□□□□ -0.26
CDH11-201ENST00000268603 NDE1Q9NXR1 346 aa13.41□□□□□ -0.26
CDH11-201ENST00000268603 HOXA13P31271 388 aaPredicted RBP13.41□□□□□ -0.26
CDH11-201ENST00000268603 PCDHB8Q9UN66 801 aa13.41□□□□□ -0.26
CDH11-201ENST00000268603 PEX3P56589 373 aa13.41□□□□□ -0.26
CDH11-201ENST00000268603 MDM2Q00987 491 aaPredicted RBP13.41□□□□□ -0.26
CDH11-201ENST00000268603 TRIM32Q13049 653 aa13.41□□□□□ -0.26
CDH11-201ENST00000268603 GPATCH4Q5T3I0 446 aaKnown RBP13.41□□□□□ -0.26
CDH11-201ENST00000268603 RCSD1Q6JBY9 416 aa13.41□□□□□ -0.26
CDH11-201ENST00000268603 LRRC8EQ6NSJ5 796 aa13.41□□□□□ -0.26
CDH11-201ENST00000268603 KRT78Q8N1N4 520 aa13.41□□□□□ -0.26
CDH11-201ENST00000268603 MB21D1Q8N884 522 aa13.41□□□□□ -0.26
CDH11-201ENST00000268603 SYT2Q8N9I0 419 aaPredicted RBP13.41□□□□□ -0.26
CDH11-201ENST00000268603 ADCY3O60266 1144 aa13.41□□□□□ -0.26
CDH11-201ENST00000268603 HPCAP84074 193 aa13.41□□□□□ -0.26
CDH11-201ENST00000268603 CTTNQ14247 550 aaKnown RBP13.41□□□□□ -0.26
CDH11-201ENST00000268603 ANKS6Q68DC2 871 aa13.41□□□□□ -0.26
CDH11-201ENST00000268603 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.41□□□□□ -0.26
CDH11-201ENST00000268603 BTBD6Q96KE9 485 aa13.41□□□□□ -0.26
CDH11-201ENST00000268603 TRIM33Q9UPN9 1127 aa13.41□□□□□ -0.26
CDH11-201ENST00000268603 RRP15Q9Y3B9 282 aaKnown RBP13.41□□□□□ -0.26
CDH11-201ENST00000268603 EPN1Q9Y6I3 576 aaPredicted RBP13.41□□□□□ -0.26
CDH11-201ENST00000268603 SMARCA1P28370 1054 aa13.4□□□□□ -0.26
CDH11-201ENST00000268603 MXI1P50539 228 aa13.4□□□□□ -0.26
CDH11-201ENST00000268603 COPB1P53618 953 aaKnown RBP13.4□□□□□ -0.26
CDH11-201ENST00000268603 TNFAIP2Q03169 654 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms