RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 GCNT4Q9P109 453 aa12.19□□□□□ -0.46
MSH3-201ENST00000265081 PCDHB13Q9Y5F0 798 aa12.19□□□□□ -0.46
MSH3-201ENST00000265081 DDX3XO00571 662 aaKnown RBP eCLIP12.19□□□□□ -0.462e-8■■□□□ 12.1
MSH3-201ENST00000265081 HIP1RO75146 1068 aa12.19□□□□□ -0.46
MSH3-201ENST00000265081 OAZ1P54368 228 aa12.19□□□□□ -0.46
MSH3-201ENST00000265081 RAPGEF1Q13905 1077 aa12.19□□□□□ -0.46
MSH3-201ENST00000265081 LNX1Q8TBB1 728 aaPredicted RBP12.19□□□□□ -0.46
MSH3-201ENST00000265081 VTI1AQ96AJ9 217 aa12.19□□□□□ -0.46
MSH3-201ENST00000265081 TBC1D22BQ9NU19 505 aa12.19□□□□□ -0.46
MSH3-201ENST00000265081 CCPG1Q9ULG6 757 aa12.19□□□□□ -0.46
MSH3-201ENST00000265081 ZHX2Q9Y6X8 837 aa12.19□□□□□ -0.46
MSH3-201ENST00000265081 ASTN2O75129 1339 aaPredicted RBP12.19□□□□□ -0.46
MSH3-201ENST00000265081 RARRES1P49788 294 aa12.19□□□□□ -0.46
MSH3-201ENST00000265081 EPC2Q52LR7 807 aa12.19□□□□□ -0.46
MSH3-201ENST00000265081 MYCT1Q8N699 235 aa12.19□□□□□ -0.46
MSH3-201ENST00000265081 SLC17A8Q8NDX2 589 aa12.19□□□□□ -0.46
MSH3-201ENST00000265081 HVCN1Q96D96 273 aa12.19□□□□□ -0.46
MSH3-201ENST00000265081 ZNF341Q9BYN7 854 aa12.19□□□□□ -0.46
MSH3-201ENST00000265081 NCK2O43639 380 aa12.18□□□□□ -0.46
MSH3-201ENST00000265081 PLS3P13797 630 aa12.18□□□□□ -0.46
MSH3-201ENST00000265081 SOX5P35711 763 aa12.18□□□□□ -0.46
MSH3-201ENST00000265081 RASA3Q14644 834 aa12.18□□□□□ -0.46
MSH3-201ENST00000265081 CBWD6Q4V339 395 aa12.18□□□□□ -0.46
MSH3-201ENST00000265081 MUM1L1Q5H9M0 696 aa12.18□□□□□ -0.46
MSH3-201ENST00000265081 CBWD3Q5JTY5 395 aa12.18□□□□□ -0.46
MSH3-201ENST00000265081 CBWD5Q5RIA9 395 aa12.18□□□□□ -0.46
MSH3-201ENST00000265081 SLC30A10Q6XR72 485 aa12.18□□□□□ -0.46
MSH3-201ENST00000265081 SCFD2Q8WU76 684 aa12.18□□□□□ -0.46
MSH3-201ENST00000265081 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.18□□□□□ -0.46
MSH3-201ENST00000265081 CAPZA3Q96KX2 299 aa12.18□□□□□ -0.46
MSH3-201ENST00000265081 LRRC1Q9BTT6 524 aa12.18□□□□□ -0.46
MSH3-201ENST00000265081 PDLIM7Q9NR12 457 aa12.18□□□□□ -0.46
MSH3-201ENST00000265081 ZSWIM8A7E2V4 1837 aa12.18□□□□□ -0.46
MSH3-201ENST00000265081 NFKBIEO00221 500 aa12.18□□□□□ -0.46
MSH3-201ENST00000265081 BFSP1Q12934 665 aa12.18□□□□□ -0.46
MSH3-201ENST00000265081 CIAPIN1Q6FI81 312 aa12.18□□□□□ -0.46
MSH3-201ENST00000265081 TPCN2Q8NHX9 752 aa12.18□□□□□ -0.46
MSH3-201ENST00000265081 IKZF4Q9H2S9 585 aa12.18□□□□□ -0.46
MSH3-201ENST00000265081 ADAMTS1Q9UHI8 967 aa12.18□□□□□ -0.46
MSH3-201ENST00000265081 ERCC3P19447 782 aa12.18□□□□□ -0.46
MSH3-201ENST00000265081 PPATQ06203 517 aa12.18□□□□□ -0.46
MSH3-201ENST00000265081 CFAP221Q4G0U5 840 aa12.18□□□□□ -0.46
MSH3-201ENST00000265081 TDRD12Q587J7 1177 aaKnown RBP12.18□□□□□ -0.46
MSH3-201ENST00000265081 MIGA2Q7L4E1 593 aa12.18□□□□□ -0.46
MSH3-201ENST00000265081 BANK1Q8NDB2 785 aa12.18□□□□□ -0.46
MSH3-201ENST00000265081 SEC14L1Q92503 715 aa12.18□□□□□ -0.46
MSH3-201ENST00000265081 HOOK2Q96ED9 719 aa12.18□□□□□ -0.46
MSH3-201ENST00000265081 HES6Q96HZ4 224 aa12.18□□□□□ -0.46
MSH3-201ENST00000265081 SELENOOQ9BVL4 669 aa12.18□□□□□ -0.46
MSH3-201ENST00000265081 TMEM206Q9H813 350 aa12.18□□□□□ -0.46
MSH3-201ENST00000265081 STIM2Q9P246 746 aa12.18□□□□□ -0.46
MSH3-201ENST00000265081 SF3B2Q13435 895 aaKnown RBP12.17□□□□□ -0.46
MSH3-201ENST00000265081 TNFAIP1Q13829 316 aa12.17□□□□□ -0.46
MSH3-201ENST00000265081 FAM178BQ8IXR5 827 aa12.17□□□□□ -0.46
MSH3-201ENST00000265081 HDAC7Q8WUI4 952 aa12.17□□□□□ -0.46
MSH3-201ENST00000265081 PXMP2Q9NR77 195 aa12.17□□□□□ -0.46
MSH3-201ENST00000265081 RBM12Q9NTZ6 932 aaKnown RBP12.17□□□□□ -0.46
MSH3-201ENST00000265081 ANKEF1Q9NU02 776 aa12.17□□□□□ -0.46
MSH3-201ENST00000265081 SUCLA2Q9P2R7 463 aaPredicted RBP12.17□□□□□ -0.46
MSH3-201ENST00000265081 ADAM21Q9UKJ8 722 aa12.17□□□□□ -0.46
MSH3-201ENST00000265081 FZD9O00144 591 aa12.17□□□□□ -0.46
MSH3-201ENST00000265081 VCAM1P19320 739 aa12.17□□□□□ -0.46
MSH3-201ENST00000265081 EMBQ6PCB8 327 aa12.17□□□□□ -0.46
MSH3-201ENST00000265081 PADI6Q6TGC4 694 aa12.17□□□□□ -0.46
MSH3-201ENST00000265081 USP38Q8NB14 1042 aa12.17□□□□□ -0.46
MSH3-201ENST00000265081 C1orf131Q8NDD1 294 aaKnown RBP12.17□□□□□ -0.46
MSH3-201ENST00000265081 PBKQ96KB5 322 aa12.17□□□□□ -0.46
MSH3-201ENST00000265081 NTPCRQ9BSD7 190 aaKnown RBP12.17□□□□□ -0.46
MSH3-201ENST00000265081 APEX2Q9UBZ4 518 aa12.17□□□□□ -0.46
MSH3-201ENST00000265081 DMGDHQ9UI17 866 aaKnown RBP12.17□□□□□ -0.46
MSH3-201ENST00000265081 SBF1O95248 1867 aa12.17□□□□□ -0.46
MSH3-201ENST00000265081 CLIC2O15247 247 aa12.17□□□□□ -0.46
MSH3-201ENST00000265081 N4BP1O75113 896 aaKnown RBP12.17□□□□□ -0.46
MSH3-201ENST00000265081 FLOT1O75955 427 aa12.17□□□□□ -0.46
MSH3-201ENST00000265081 JAK3P52333 1124 aa12.17□□□□□ -0.46
MSH3-201ENST00000265081 TNIP1Q15025 636 aa12.17□□□□□ -0.46
MSH3-201ENST00000265081 KIAA0753Q2KHM9 967 aa12.17□□□□□ -0.46
MSH3-201ENST00000265081 EMC10Q5UCC4 262 aa12.17□□□□□ -0.46
MSH3-201ENST00000265081 ZCCHC17Q9NP64 241 aaKnown RBP12.17□□□□□ -0.46
MSH3-201ENST00000265081 NFASCO94856 1347 aa12.17□□□□□ -0.46
MSH3-201ENST00000265081 SFI1A8K8P3 1242 aa12.16□□□□□ -0.46
MSH3-201ENST00000265081 TMEM253P0C7T8 217 aa12.16□□□□□ -0.46
MSH3-201ENST00000265081 SFNP31947 248 aa12.16□□□□□ -0.46
MSH3-201ENST00000265081 STAT1P42224 750 aa12.16□□□□□ -0.46
MSH3-201ENST00000265081 EPS15P42566 896 aa12.16□□□□□ -0.46
MSH3-201ENST00000265081 FBXL18Q96ME1 805 aa12.16□□□□□ -0.46
MSH3-201ENST00000265081 INTS2Q9H0H0 1204 aaKnown RBP12.16□□□□□ -0.46
MSH3-201ENST00000265081 VEZTQ9HBM0 779 aa12.16□□□□□ -0.46
MSH3-201ENST00000265081 PIM2Q9P1W9 311 aa12.16□□□□□ -0.46
MSH3-201ENST00000265081 BUB1O43683 1085 aa12.16□□□□□ -0.46
MSH3-201ENST00000265081 SHOX2O60902 331 aaPredicted RBP12.16□□□□□ -0.46
MSH3-201ENST00000265081 KIF4AO95239 1232 aa12.16□□□□□ -0.46
MSH3-201ENST00000265081 QARSP47897 775 aaKnown RBP12.16□□□□□ -0.46
MSH3-201ENST00000265081 RTP1P59025 263 aa12.16□□□□□ -0.46
MSH3-201ENST00000265081 IFI16Q16666 785 aaKnown RBP12.16□□□□□ -0.46
MSH3-201ENST00000265081 MIER3Q7Z3K6 550 aa12.16□□□□□ -0.46
MSH3-201ENST00000265081 VWA5AO00534 786 aa12.16□□□□□ -0.46
MSH3-201ENST00000265081 EVI5O60447 810 aa12.16□□□□□ -0.46
MSH3-201ENST00000265081 EPHB4P54760 987 aa12.16□□□□□ -0.46
MSH3-201ENST00000265081 GPS2Q13227 327 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms