RNA–Protein interactions for RNA: ENST00000263351.9

ZNF541-201, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-201ENST00000263351 RPA1P27694 616 aa17.96■□□□□ 0.47
ZNF541-201ENST00000263351 IFI35P80217 286 aaPredicted RBP17.96■□□□□ 0.47
ZNF541-201ENST00000263351 POU5F1Q01860 360 aaKnown RBP17.96■□□□□ 0.47
ZNF541-201ENST00000263351 RRP1BQ14684 758 aaKnown RBP17.96■□□□□ 0.47
ZNF541-201ENST00000263351 RINT1Q6NUQ1 792 aa17.96■□□□□ 0.47
ZNF541-201ENST00000263351 C6orf89Q6UWU4 347 aa17.96■□□□□ 0.47
ZNF541-201ENST00000263351 C15orf52Q6ZUT6 534 aaKnown RBP17.96■□□□□ 0.47
ZNF541-201ENST00000263351 SUGP1Q8IWZ8 645 aaKnown RBP17.96■□□□□ 0.47
ZNF541-201ENST00000263351 HES6Q96HZ4 224 aa17.96■□□□□ 0.47
ZNF541-201ENST00000263351 DYDC2Q96IM9 177 aa17.96■□□□□ 0.47
ZNF541-201ENST00000263351 GMNCA6NCL1 334 aa17.96■□□□□ 0.47
ZNF541-201ENST00000263351 ANKRD63C9JTQ0 380 aa17.96■□□□□ 0.47
ZNF541-201ENST00000263351 GPATCH4Q5T3I0 446 aaKnown RBP17.96■□□□□ 0.47
ZNF541-201ENST00000263351 SLFN11Q7Z7L1 901 aa17.96■□□□□ 0.47
ZNF541-201ENST00000263351 FAM186BQ8IYM0 893 aa17.96■□□□□ 0.47
ZNF541-201ENST00000263351 POP1Q99575 1024 aaKnown RBP17.96■□□□□ 0.47
ZNF541-201ENST00000263351 WDR18Q9BV38 432 aa17.96■□□□□ 0.47
ZNF541-201ENST00000263351 DDX39AO00148 427 aaKnown RBP17.95■□□□□ 0.46
ZNF541-201ENST00000263351 TRAPPC3O43617 180 aa17.95■□□□□ 0.46
ZNF541-201ENST00000263351 TBCAO75347 108 aaKnown RBP17.95■□□□□ 0.46
ZNF541-201ENST00000263351 PRKCIP41743 596 aa17.95■□□□□ 0.46
ZNF541-201ENST00000263351 RBM5P52756 815 aaKnown RBP eCLIP17.95■□□□□ 0.46
ZNF541-201ENST00000263351 PPP2R2AP63151 447 aa17.95■□□□□ 0.46
ZNF541-201ENST00000263351 PPP1R18Q6NYC8 613 aa17.95■□□□□ 0.46
ZNF541-201ENST00000263351 FBXO25Q8TCJ0 367 aa17.95■□□□□ 0.46
ZNF541-201ENST00000263351 BORCS6Q96GS4 357 aa17.95■□□□□ 0.46
ZNF541-201ENST00000263351 TYW1Q9NV66 732 aaKnown RBP17.95■□□□□ 0.46
ZNF541-201ENST00000263351 RABGAP1Q9Y3P9 1069 aa17.95■□□□□ 0.46
ZNF541-201ENST00000263351 PDXKO00764 312 aa17.95■□□□□ 0.46
ZNF541-201ENST00000263351 FSBPO95073 299 aa17.95■□□□□ 0.46
ZNF541-201ENST00000263351 KRT13P13646 458 aa17.95■□□□□ 0.46
ZNF541-201ENST00000263351 CUL1Q13616 776 aa17.95■□□□□ 0.46
ZNF541-201ENST00000263351 PHLDB3Q6NSJ2 640 aa17.95■□□□□ 0.46
ZNF541-201ENST00000263351 RNF25Q96BH1 459 aaPredicted RBP17.95■□□□□ 0.46
ZNF541-201ENST00000263351 HOOK2Q96ED9 719 aa17.95■□□□□ 0.46
ZNF541-201ENST00000263351 SEC16BQ96JE7 1060 aa17.95■□□□□ 0.46
ZNF541-201ENST00000263351 ATAD5Q96QE3 1844 aa17.95■□□□□ 0.46
ZNF541-201ENST00000263351 BHMG1C9JSJ3 638 aaPredicted RBP17.94■□□□□ 0.46
ZNF541-201ENST00000263351 FOXN3O00409 490 aaPredicted RBP17.94■□□□□ 0.46
ZNF541-201ENST00000263351 CALUO43852 315 aaPredicted RBP17.94■□□□□ 0.46
ZNF541-201ENST00000263351 FGFR4P22455 802 aa17.94■□□□□ 0.46
ZNF541-201ENST00000263351 IFFO1Q0D2I5 559 aa17.94■□□□□ 0.46
ZNF541-201ENST00000263351 SLC30A5Q8TAD4 765 aa17.94■□□□□ 0.46
ZNF541-201ENST00000263351 RBM17Q96I25 401 aaKnown RBP17.94■□□□□ 0.46
ZNF541-201ENST00000263351 SLC40A1Q9NP59 571 aa17.94■□□□□ 0.46
ZNF541-201ENST00000263351 AMFRQ9UKV5 643 aa17.94■□□□□ 0.46
ZNF541-201ENST00000263351 PITPNM2Q9BZ72 1349 aa17.94■□□□□ 0.46
ZNF541-201ENST00000263351 F5H6K3 240 aa17.94■□□□□ 0.46
ZNF541-201ENST00000263351 ZNF76P36508 570 aa17.94■□□□□ 0.46
ZNF541-201ENST00000263351 KCNJ1P48048 391 aa17.94■□□□□ 0.46
ZNF541-201ENST00000263351 KLRC3Q07444 240 aa17.94■□□□□ 0.46
ZNF541-201ENST00000263351 KIAA1755Q5JYT7 1200 aa17.94■□□□□ 0.46
ZNF541-201ENST00000263351 RASGEF1CQ8N431 466 aa17.94■□□□□ 0.46
ZNF541-201ENST00000263351 SELENOSQ9BQE4 189 aa17.94■□□□□ 0.46
ZNF541-201ENST00000263351 VCPKMTQ9H867 229 aa17.94■□□□□ 0.46
ZNF541-201ENST00000263351 SUCLA2Q9P2R7 463 aaPredicted RBP17.94■□□□□ 0.46
ZNF541-201ENST00000263351 PTPN22Q9Y2R2 807 aa17.94■□□□□ 0.46
ZNF541-201ENST00000263351 TMEM150BA6NC51 233 aa17.93■□□□□ 0.46
ZNF541-201ENST00000263351 SOX5P35711 763 aa17.93■□□□□ 0.46
ZNF541-201ENST00000263351 STAT1P42224 750 aa17.93■□□□□ 0.46
ZNF541-201ENST00000263351 IFNAR2P48551 515 aa17.93■□□□□ 0.46
ZNF541-201ENST00000263351 FMO5P49326 533 aa17.93■□□□□ 0.46
ZNF541-201ENST00000263351 TTC27Q6P3X3 843 aa17.93■□□□□ 0.46
ZNF541-201ENST00000263351 TBC1D22AQ8WUA7 517 aa17.93■□□□□ 0.46
ZNF541-201ENST00000263351 LRRC45Q96CN5 670 aa17.93■□□□□ 0.46
ZNF541-201ENST00000263351 CABS1Q96KC9 395 aa17.93■□□□□ 0.46
ZNF541-201ENST00000263351 DNAJC17Q9NVM6 304 aaKnown RBP17.93■□□□□ 0.46
ZNF541-201ENST00000263351 CYP3A7-CYP3A51PA0A087WV96 503 aa17.93■□□□□ 0.46
ZNF541-201ENST00000263351 A0A1W2PRG0 241 aa17.93■□□□□ 0.46
ZNF541-201ENST00000263351 BTNL10A8MVZ5 291 aa17.93■□□□□ 0.46
ZNF541-201ENST00000263351 NDUFB10O96000 172 aa17.93■□□□□ 0.46
ZNF541-201ENST00000263351 CFBP00751 764 aa17.93■□□□□ 0.46
ZNF541-201ENST00000263351 CYP3A7P24462 503 aa17.93■□□□□ 0.46
ZNF541-201ENST00000263351 USP8P40818 1118 aa17.93■□□□□ 0.46
ZNF541-201ENST00000263351 ECE1P42892 770 aa17.93■□□□□ 0.46
ZNF541-201ENST00000263351 CERKLQ49MI3 558 aaPredicted RBP17.93■□□□□ 0.46
ZNF541-201ENST00000263351 EMC10Q5UCC4 262 aa17.93■□□□□ 0.46
ZNF541-201ENST00000263351 FOCADQ5VW36 1801 aa17.93■□□□□ 0.46
ZNF541-201ENST00000263351 FOXR2Q6PJQ5 311 aa17.93■□□□□ 0.46
ZNF541-201ENST00000263351 PPP4R3CPQ6ZMV5 832 aa17.93■□□□□ 0.46
ZNF541-201ENST00000263351 SLF2Q8IX21 1173 aa17.93■□□□□ 0.46
ZNF541-201ENST00000263351 EPS8L3Q8TE67 593 aaKnown RBP17.93■□□□□ 0.46
ZNF541-201ENST00000263351 FMO2Q99518 471 aa17.93■□□□□ 0.46
ZNF541-201ENST00000263351 SEMA4AQ9H3S1 761 aa17.93■□□□□ 0.46
ZNF541-201ENST00000263351 MLXIPLQ9NP71 852 aa17.93■□□□□ 0.46
ZNF541-201ENST00000263351 SLITRK3O94933 977 aa17.92■□□□□ 0.46
ZNF541-201ENST00000263351 FAM13AO94988 1023 aa17.92■□□□□ 0.46
ZNF541-201ENST00000263351 DR1Q01658 176 aa17.92■□□□□ 0.46
ZNF541-201ENST00000263351 ICA1Q05084 483 aa17.92■□□□□ 0.46
ZNF541-201ENST00000263351 PDE4CQ08493 712 aa17.92■□□□□ 0.46
ZNF541-201ENST00000263351 PHLDB2Q86SQ0 1253 aa17.92■□□□□ 0.46
ZNF541-201ENST00000263351 FAM228AQ86W67 206 aa17.92■□□□□ 0.46
ZNF541-201ENST00000263351 ARHGEF19Q8IW93 802 aa17.92■□□□□ 0.46
ZNF541-201ENST00000263351 SLFN12Q8IYM2 578 aa17.92■□□□□ 0.46
ZNF541-201ENST00000263351 CCDC114Q96M63 670 aa17.92■□□□□ 0.46
ZNF541-201ENST00000263351 MBOAT7Q96N66 472 aa17.92■□□□□ 0.46
ZNF541-201ENST00000263351 FIZ1Q96SL8 496 aa17.92■□□□□ 0.46
ZNF541-201ENST00000263351 AZI2Q9H6S1 392 aa17.92■□□□□ 0.46
ZNF541-201ENST00000263351 UTP11Q9Y3A2 253 aaKnown RBP17.92■□□□□ 0.46
ZNF541-201ENST00000263351 GOLGA6L7A0A1B0GV03 622 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms