RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 ERP44Q9BS26 406 aa17.24■□□□□ 0.35
LMNB1-201ENST00000261366 A0A1B0GUA9 196 aa17.23■□□□□ 0.35
LMNB1-201ENST00000261366 CLSTN1O94985 981 aa17.23■□□□□ 0.35
LMNB1-201ENST00000261366 PEX19P40855 299 aa17.23■□□□□ 0.35
LMNB1-201ENST00000261366 MARCKSL1P49006 195 aa17.23■□□□□ 0.35
LMNB1-201ENST00000261366 SNAP25P60880 206 aa17.23■□□□□ 0.35
LMNB1-201ENST00000261366 SLC10A5Q5PT55 438 aa17.23■□□□□ 0.35
LMNB1-201ENST00000261366 TPTE2Q6XPS3 522 aa17.23■□□□□ 0.35
LMNB1-201ENST00000261366 JAMLQ86YT9 394 aa17.23■□□□□ 0.35
LMNB1-201ENST00000261366 ALG3Q92685 438 aa17.23■□□□□ 0.35
LMNB1-201ENST00000261366 REEP2Q9BRK0 252 aa17.23■□□□□ 0.35
LMNB1-201ENST00000261366 RAB17Q9H0T7 212 aa17.23■□□□□ 0.35
LMNB1-201ENST00000261366 ADAM7Q9H2U9 754 aa17.23■□□□□ 0.35
LMNB1-201ENST00000261366 CNOT10Q9H9A5 744 aaKnown RBP17.23■□□□□ 0.35
LMNB1-201ENST00000261366 TRIM33Q9UPN9 1127 aa17.23■□□□□ 0.35
LMNB1-201ENST00000261366 STXBP5LQ9Y2K9 1186 aa17.23■□□□□ 0.35
LMNB1-201ENST00000261366 USP17L10C9JJH3 530 aa17.23■□□□□ 0.35
LMNB1-201ENST00000261366 PPFIA2O75334 1257 aa17.23■□□□□ 0.35
LMNB1-201ENST00000261366 DNAJC8O75937 253 aaPredicted RBP17.23■□□□□ 0.35
LMNB1-201ENST00000261366 ANP32DO95626 131 aa17.23■□□□□ 0.35
LMNB1-201ENST00000261366 CREB1P16220 341 aa17.23■□□□□ 0.35
LMNB1-201ENST00000261366 TAL1P17542 331 aaPredicted RBP17.23■□□□□ 0.35
LMNB1-201ENST00000261366 DPP8Q6V1X1 898 aaPredicted RBP17.23■□□□□ 0.35
LMNB1-201ENST00000261366 TRPM8Q7Z2W7 1104 aa17.23■□□□□ 0.35
LMNB1-201ENST00000261366 ARMC9Q7Z3E5 817 aa17.23■□□□□ 0.35
LMNB1-201ENST00000261366 ADGRF4Q8IZF3 695 aa17.23■□□□□ 0.35
LMNB1-201ENST00000261366 RDH13Q8NBN7 331 aa17.23■□□□□ 0.35
LMNB1-201ENST00000261366 C3orf20Q8ND61 904 aa17.23■□□□□ 0.35
LMNB1-201ENST00000261366 AGAP11Q8TF27 550 aa17.23■□□□□ 0.35
LMNB1-201ENST00000261366 ATXN2LQ8WWM7 1075 aaKnown RBP17.23■□□□□ 0.35
LMNB1-201ENST00000261366 CTNNBL1Q8WYA6 563 aaPredicted RBP17.23■□□□□ 0.35
LMNB1-201ENST00000261366 HES6Q96HZ4 224 aa17.23■□□□□ 0.35
LMNB1-201ENST00000261366 THAP2Q9H0W7 228 aa17.23■□□□□ 0.35
LMNB1-201ENST00000261366 KIAA1551Q9HCM1 1747 aa17.23■□□□□ 0.35
LMNB1-201ENST00000261366 CES2O00748 559 aa17.22■□□□□ 0.35
LMNB1-201ENST00000261366 UPP2O95045 317 aa17.22■□□□□ 0.35
LMNB1-201ENST00000261366 HOXD13P35453 343 aa17.22■□□□□ 0.35
LMNB1-201ENST00000261366 C10orf76Q5T2E6 689 aa17.22■□□□□ 0.35
LMNB1-201ENST00000261366 DPY19L2P1Q6NXN4 242 aa17.22■□□□□ 0.35
LMNB1-201ENST00000261366 SYCE1Q8N0S2 351 aa17.22■□□□□ 0.35
LMNB1-201ENST00000261366 RASGEF1CQ8N431 466 aa17.22■□□□□ 0.35
LMNB1-201ENST00000261366 RSRC1Q96IZ7 334 aaKnown RBP17.22■□□□□ 0.35
LMNB1-201ENST00000261366 PABPC3Q9H361 631 aaKnown RBP17.22■□□□□ 0.35
LMNB1-201ENST00000261366 RIOX1Q9H6W3 641 aa17.22■□□□□ 0.35
LMNB1-201ENST00000261366 PSTPIP2Q9H939 334 aa17.22■□□□□ 0.35
LMNB1-201ENST00000261366 JMJD4Q9H9V9 463 aa17.22■□□□□ 0.35
LMNB1-201ENST00000261366 ZNF287Q9HBT7 754 aa17.22■□□□□ 0.35
LMNB1-201ENST00000261366 FGFR1OP2Q9NVK5 253 aa17.22■□□□□ 0.35
LMNB1-201ENST00000261366 BZW2Q9Y6E2 419 aaKnown RBP17.22■□□□□ 0.35
LMNB1-201ENST00000261366 SNED1Q8TER0 1413 aa17.22■□□□□ 0.35
LMNB1-201ENST00000261366 MPHOSPH10O00566 681 aaKnown RBP17.22■□□□□ 0.35
LMNB1-201ENST00000261366 KCNJ1P48048 391 aa17.22■□□□□ 0.35
LMNB1-201ENST00000261366 EPHA7Q15375 998 aa17.22■□□□□ 0.35
LMNB1-201ENST00000261366 KNOP1Q1ED39 458 aaKnown RBP17.22■□□□□ 0.35
LMNB1-201ENST00000261366 SPICE1Q8N0Z3 855 aa17.22■□□□□ 0.35
LMNB1-201ENST00000261366 GDAP1Q8TB36 358 aa17.22■□□□□ 0.35
LMNB1-201ENST00000261366 NYXQ9GZU5 481 aa17.22■□□□□ 0.35
LMNB1-201ENST00000261366 NT5C3AQ9H0P0 336 aa17.22■□□□□ 0.35
LMNB1-201ENST00000261366 DHX36Q9H2U1 1008 aaKnown RBP17.22■□□□□ 0.35
LMNB1-201ENST00000261366 ATP6V0A4Q9HBG4 840 aa17.22■□□□□ 0.35
LMNB1-201ENST00000261366 GOLGA6L10A0A0M3HER8 536 aa17.22■□□□□ 0.35
LMNB1-201ENST00000261366 DIAPH2O60879 1101 aa17.22■□□□□ 0.35
LMNB1-201ENST00000261366 NR3C1P04150 777 aa17.22■□□□□ 0.35
LMNB1-201ENST00000261366 AKR1B1P15121 316 aa17.22■□□□□ 0.35
LMNB1-201ENST00000261366 STAT1P42224 750 aa17.22■□□□□ 0.35
LMNB1-201ENST00000261366 POU5F1Q01860 360 aaKnown RBP17.22■□□□□ 0.35
LMNB1-201ENST00000261366 LONRF1Q17RB8 773 aa17.22■□□□□ 0.35
LMNB1-201ENST00000261366 PRR16Q569H4 304 aa17.22■□□□□ 0.35
LMNB1-201ENST00000261366 KIAA1755Q5JYT7 1200 aa17.22■□□□□ 0.35
LMNB1-201ENST00000261366 NAIF1Q69YI7 327 aaPredicted RBP17.22■□□□□ 0.35
LMNB1-201ENST00000261366 C16orf86Q6ZW13 317 aa17.22■□□□□ 0.35
LMNB1-201ENST00000261366 EIF1ADQ8N9N8 165 aaKnown RBP17.22■□□□□ 0.35
LMNB1-201ENST00000261366 KRT35Q92764 455 aa17.22■□□□□ 0.35
LMNB1-201ENST00000261366 ANKRD2Q9GZV1 360 aa17.22■□□□□ 0.35
LMNB1-201ENST00000261366 SIX2Q9NPC8 291 aa17.22■□□□□ 0.35
LMNB1-201ENST00000261366 ZDHHC18Q9NUE0 388 aa17.22■□□□□ 0.35
LMNB1-201ENST00000261366 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.22■□□□□ 0.35
LMNB1-201ENST00000261366 TRIM49P0CI25 452 aa17.21■□□□□ 0.35
LMNB1-201ENST00000261366 TRIM49CP0CI26 452 aa17.21■□□□□ 0.35
LMNB1-201ENST00000261366 ZNF746Q6NUN9 644 aaPredicted RBP17.21■□□□□ 0.35
LMNB1-201ENST00000261366 ARHGAP27Q6ZUM4 889 aa17.21■□□□□ 0.35
LMNB1-201ENST00000261366 FAXDC2Q96IV6 333 aa17.21■□□□□ 0.35
LMNB1-201ENST00000261366 BTNL10A8MVZ5 291 aa17.21■□□□□ 0.35
LMNB1-201ENST00000261366 ACSL3O95573 720 aa17.21■□□□□ 0.35
LMNB1-201ENST00000261366 RPL21P46778 160 aaKnown RBP17.21■□□□□ 0.35
LMNB1-201ENST00000261366 MRPL12P52815 198 aaKnown RBP17.21■□□□□ 0.35
LMNB1-201ENST00000261366 MARSP56192 900 aaKnown RBP17.21■□□□□ 0.35
LMNB1-201ENST00000261366 PTENP60484 403 aa17.21■□□□□ 0.35
LMNB1-201ENST00000261366 KLRC3Q07444 240 aa17.21■□□□□ 0.35
LMNB1-201ENST00000261366 RC3H1Q5TC82 1133 aaKnown RBP17.21■□□□□ 0.35
LMNB1-201ENST00000261366 DUPD1Q68J44 220 aa17.21■□□□□ 0.35
LMNB1-201ENST00000261366 SLFN11Q7Z7L1 901 aa17.21■□□□□ 0.35
LMNB1-201ENST00000261366 WDR66Q8TBY9 1149 aa17.21■□□□□ 0.35
LMNB1-201ENST00000261366 KCNV2Q8TDN2 545 aa17.21■□□□□ 0.35
LMNB1-201ENST00000261366 SLC35C1Q96A29 364 aa17.21■□□□□ 0.35
LMNB1-201ENST00000261366 RTFDC1Q9BY42 306 aaPredicted RBP17.21■□□□□ 0.35
LMNB1-201ENST00000261366 TRIM6Q9C030 488 aaPredicted RBP17.21■□□□□ 0.35
LMNB1-201ENST00000261366 KCNK9Q9NPC2 374 aa17.21■□□□□ 0.35
LMNB1-201ENST00000261366 PNMA3Q9UL41 463 aa17.21■□□□□ 0.35
LMNB1-201ENST00000261366 LAMB1P07942 1786 aa17.21■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms