RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 IGSF10Q6WRI0 2623 aa6.36□□□□□ -1.39
TOPBP1-201ENST00000260810 NR3C2P08235 984 aa6.36□□□□□ -1.39
TOPBP1-201ENST00000260810 SLC9A1P19634 815 aa6.36□□□□□ -1.39
TOPBP1-201ENST00000260810 ADORA2AP29274 412 aa6.36□□□□□ -1.39
TOPBP1-201ENST00000260810 SLC1A4P43007 532 aa6.36□□□□□ -1.39
TOPBP1-201ENST00000260810 EPC2Q52LR7 807 aa6.36□□□□□ -1.39
TOPBP1-201ENST00000260810 LRRC57Q8N9N7 239 aa6.36□□□□□ -1.39
TOPBP1-201ENST00000260810 KBTBD7Q8WVZ9 684 aa6.36□□□□□ -1.39
TOPBP1-201ENST00000260810 GOLPH3Q9H4A6 298 aa6.36□□□□□ -1.39
TOPBP1-201ENST00000260810 PSTPIP2Q9H939 334 aa6.36□□□□□ -1.39
TOPBP1-201ENST00000260810 EHD2Q9NZN4 543 aa6.36□□□□□ -1.39
TOPBP1-201ENST00000260810 LIMA1Q9UHB6 759 aaKnown RBP6.36□□□□□ -1.39
TOPBP1-201ENST00000260810 CHORDC1Q9UHD1 332 aaPredicted RBP6.36□□□□□ -1.39
TOPBP1-201ENST00000260810 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.35□□□□□ -1.39
TOPBP1-201ENST00000260810 TTC26A0AVF1 554 aa6.35□□□□□ -1.39
TOPBP1-201ENST00000260810 FGFR1P11362 822 aa6.35□□□□□ -1.39
TOPBP1-201ENST00000260810 LETM2Q2VYF4 491 aa6.35□□□□□ -1.39
TOPBP1-201ENST00000260810 SYNE3Q6ZMZ3 975 aa6.35□□□□□ -1.39
TOPBP1-201ENST00000260810 CCNT1O60563 726 aaKnown RBP6.35□□□□□ -1.39
TOPBP1-201ENST00000260810 NBNO60934 754 aa6.35□□□□□ -1.39
TOPBP1-201ENST00000260810 PRKCZQ05513 592 aa6.35□□□□□ -1.39
TOPBP1-201ENST00000260810 POSTNQ15063 836 aa6.35□□□□□ -1.39
TOPBP1-201ENST00000260810 NEK8Q86SG6 692 aa6.35□□□□□ -1.39
TOPBP1-201ENST00000260810 IFNLR1Q8IU57 520 aaPredicted RBP6.35□□□□□ -1.39
TOPBP1-201ENST00000260810 TCRBV7S2A1N4TA0A589 114 aa6.35□□□□□ -1.39
TOPBP1-201ENST00000260810 IPO5O00410 1097 aaKnown RBP6.35□□□□□ -1.39
TOPBP1-201ENST00000260810 ST18O60284 1047 aa6.35□□□□□ -1.39
TOPBP1-201ENST00000260810 PARP1P09874 1014 aaKnown RBP6.35□□□□□ -1.39
TOPBP1-201ENST00000260810 NLRP12P59046 1061 aa6.35□□□□□ -1.39
TOPBP1-201ENST00000260810 MBTD1Q05BQ5 628 aa6.35□□□□□ -1.39
TOPBP1-201ENST00000260810 MESP2Q0VG99 397 aa6.35□□□□□ -1.39
TOPBP1-201ENST00000260810 COASYQ13057 564 aa6.35□□□□□ -1.39
TOPBP1-201ENST00000260810 PRPF4BQ13523 1007 aaKnown RBP6.35□□□□□ -1.39
TOPBP1-201ENST00000260810 ZNF598Q86UK7 904 aaKnown RBP6.35□□□□□ -1.39
TOPBP1-201ENST00000260810 ERO1BQ86YB8 467 aa6.35□□□□□ -1.39
TOPBP1-201ENST00000260810 HHIPL1Q96JK4 782 aa6.35□□□□□ -1.39
TOPBP1-201ENST00000260810 TRERF1Q96PN7 1200 aa6.35□□□□□ -1.39
TOPBP1-201ENST00000260810 DDX19AQ9NUU7 478 aaKnown RBP6.35□□□□□ -1.39
TOPBP1-201ENST00000260810 ZNF212Q9UDV6 495 aa6.35□□□□□ -1.39
TOPBP1-201ENST00000260810 CPA4Q9UI42 421 aa6.35□□□□□ -1.39
TOPBP1-201ENST00000260810 SMC3Q9UQE7 1217 aa6.35□□□□□ -1.39
TOPBP1-201ENST00000260810 BEST1O76090 585 aa6.35□□□□□ -1.39
TOPBP1-201ENST00000260810 TBC1D8O95759 1140 aa6.35□□□□□ -1.39
TOPBP1-201ENST00000260810 KCNB1Q14721 858 aa6.35□□□□□ -1.39
TOPBP1-201ENST00000260810 GPATCH4Q5T3I0 446 aaKnown RBP6.35□□□□□ -1.39
TOPBP1-201ENST00000260810 SPTY2D1Q68D10 685 aaPredicted RBP6.35□□□□□ -1.39
TOPBP1-201ENST00000260810 SH3RF2Q8TEC5 729 aa6.35□□□□□ -1.39
TOPBP1-201ENST00000260810 CCDC34Q96HJ3 373 aa6.35□□□□□ -1.39
TOPBP1-201ENST00000260810 CRISPLD2Q9H0B8 497 aa6.35□□□□□ -1.39
TOPBP1-201ENST00000260810 WBP1LQ9NX94 342 aa6.35□□□□□ -1.39
TOPBP1-201ENST00000260810 KMT2BQ9UMN6 2715 aaPredicted RBP6.35□□□□□ -1.39
TOPBP1-201ENST00000260810 TMEM131Q92545 1883 aa6.35□□□□□ -1.39
TOPBP1-201ENST00000260810 FAM170AA1A519 330 aa6.35□□□□□ -1.39
TOPBP1-201ENST00000260810 TBC1D4O60343 1298 aa6.35□□□□□ -1.39
TOPBP1-201ENST00000260810 DNAJB1P25685 340 aa6.35□□□□□ -1.39
TOPBP1-201ENST00000260810 ZNF75DP51815 510 aa6.35□□□□□ -1.39
TOPBP1-201ENST00000260810 PURAQ00577 322 aaKnown RBP6.35□□□□□ -1.39
TOPBP1-201ENST00000260810 KCNC3Q14003 757 aa6.35□□□□□ -1.39
TOPBP1-201ENST00000260810 DSC3Q14574 896 aa6.35□□□□□ -1.39
TOPBP1-201ENST00000260810 CCDC96Q2M329 555 aa6.35□□□□□ -1.39
TOPBP1-201ENST00000260810 SNRNP48Q6IEG0 339 aaKnown RBP6.35□□□□□ -1.39
TOPBP1-201ENST00000260810 ZSCAN25Q6NSZ9 544 aa6.35□□□□□ -1.39
TOPBP1-201ENST00000260810 AADACL2Q6P093 401 aa6.35□□□□□ -1.39
TOPBP1-201ENST00000260810 LPAR1Q92633 364 aa6.35□□□□□ -1.39
TOPBP1-201ENST00000260810 SLF1Q9BQI6 1058 aa6.35□□□□□ -1.39
TOPBP1-201ENST00000260810 POLR3CQ9BUI4 534 aaPredicted RBP6.35□□□□□ -1.39
TOPBP1-201ENST00000260810 ALG13Q9NP73 1137 aaKnown RBP6.35□□□□□ -1.39
TOPBP1-201ENST00000260810 PPP1R1BQ9UD71 204 aaPredicted RBP6.35□□□□□ -1.39
TOPBP1-201ENST00000260810 STXBP5LQ9Y2K9 1186 aa6.35□□□□□ -1.39
TOPBP1-201ENST00000260810 MYO9BQ13459 2157 aa6.35□□□□□ -1.39
TOPBP1-201ENST00000260810 ZKSCAN1P17029 563 aaPredicted RBP6.34□□□□□ -1.39
TOPBP1-201ENST00000260810 PSMA5P28066 241 aa6.34□□□□□ -1.39
TOPBP1-201ENST00000260810 FSIP1Q8NA03 581 aa6.34□□□□□ -1.39
TOPBP1-201ENST00000260810 ZNF668Q96K58 619 aaPredicted RBP6.34□□□□□ -1.39
TOPBP1-201ENST00000260810 FZD8Q9H461 694 aa6.34□□□□□ -1.39
TOPBP1-201ENST00000260810 DIS3Q9Y2L1 958 aaKnown RBP6.34□□□□□ -1.39
TOPBP1-201ENST00000260810 NCOR1O75376 2440 aa6.34□□□□□ -1.39
TOPBP1-201ENST00000260810 CUTAO60888 179 aa6.34□□□□□ -1.39
TOPBP1-201ENST00000260810 PITX1P78337 314 aaPredicted RBP6.34□□□□□ -1.39
TOPBP1-201ENST00000260810 TFAP2BQ92481 460 aa6.34□□□□□ -1.39
TOPBP1-201ENST00000260810 EIF2AQ9BY44 585 aaKnown RBP6.34□□□□□ -1.39
TOPBP1-201ENST00000260810 EHMT1Q9H9B1 1298 aa6.34□□□□□ -1.39
TOPBP1-201ENST00000260810 OLFML3Q9NRN5 406 aa6.34□□□□□ -1.39
TOPBP1-201ENST00000260810 CREBZFQ9NS37 354 aa6.34□□□□□ -1.39
TOPBP1-201ENST00000260810 HOMER2Q9NSB8 354 aa6.34□□□□□ -1.39
TOPBP1-201ENST00000260810 HCN2Q9UL51 889 aa6.34□□□□□ -1.39
TOPBP1-201ENST00000260810 CAPN6Q9Y6Q1 641 aa6.34□□□□□ -1.39
TOPBP1-201ENST00000260810 PIGRP01833 764 aa6.34□□□□□ -1.39
TOPBP1-201ENST00000260810 C4BPAP04003 597 aaKnown RBP6.34□□□□□ -1.39
TOPBP1-201ENST00000260810 FGFR4P22455 802 aa6.34□□□□□ -1.39
TOPBP1-201ENST00000260810 NRLP54845 237 aa6.34□□□□□ -1.39
TOPBP1-201ENST00000260810 PGLYRP2Q96PD5 576 aa6.34□□□□□ -1.39
TOPBP1-201ENST00000260810 PPP2R3BQ9Y5P8 575 aa6.34□□□□□ -1.39
TOPBP1-201ENST00000260810 PCM1Q15154 2024 aa6.34□□□□□ -1.39
TOPBP1-201ENST00000260810 ZNF286BP0CG31 522 aa6.34□□□□□ -1.4
TOPBP1-201ENST00000260810 IL4RP24394 825 aa6.34□□□□□ -1.4
TOPBP1-201ENST00000260810 SNX17Q15036 470 aa6.34□□□□□ -1.4
TOPBP1-201ENST00000260810 GLIPR1L2Q4G1C9 344 aa6.34□□□□□ -1.4
TOPBP1-201ENST00000260810 REXO1Q8N1G1 1221 aaKnown RBP6.34□□□□□ -1.4
TOPBP1-201ENST00000260810 KRI1Q8N9T8 703 aaKnown RBP6.34□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms