RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 MCM6Q14566 821 aa22.96■■□□□ 1.27
RTCA-201ENST00000260563 SV2BQ7L1I2 683 aa22.96■■□□□ 1.27
RTCA-201ENST00000260563 RSPH3Q86UC2 560 aa22.96■■□□□ 1.27
RTCA-201ENST00000260563 DNAJB3Q8WWF6 145 aa22.96■■□□□ 1.27
RTCA-201ENST00000260563 DHX38Q92620 1227 aaKnown RBP22.96■■□□□ 1.27
RTCA-201ENST00000260563 DPF3Q92784 378 aa22.96■■□□□ 1.27
RTCA-201ENST00000260563 ERCC4Q92889 916 aaPredicted RBP22.96■■□□□ 1.27
RTCA-201ENST00000260563 WNT8BQ93098 351 aa22.96■■□□□ 1.27
RTCA-201ENST00000260563 MAP7D2Q96T17 732 aa22.96■■□□□ 1.27
RTCA-201ENST00000260563 DNM2P50570 870 aa22.95■■□□□ 1.26
RTCA-201ENST00000260563 AMPD3Q01432 767 aa22.95■■□□□ 1.26
RTCA-201ENST00000260563 BFSP2Q13515 415 aa22.95■■□□□ 1.26
RTCA-201ENST00000260563 LINC01465Q8N7H1 131 aa22.95■■□□□ 1.26
RTCA-201ENST00000260563 MCPH1Q8NEM0 835 aa22.95■■□□□ 1.26
RTCA-201ENST00000260563 KCND2Q9NZV8 630 aa22.95■■□□□ 1.26
RTCA-201ENST00000260563 KIAA1468Q9P260 1216 aa22.95■■□□□ 1.26
RTCA-201ENST00000260563 PRKAG2Q9UGJ0 569 aa22.95■■□□□ 1.26
RTCA-201ENST00000260563 TBX21Q9UL17 535 aa22.95■■□□□ 1.26
RTCA-201ENST00000260563 AKT3Q9Y243 479 aa22.95■■□□□ 1.26
RTCA-201ENST00000260563 GTPBP6O43824 516 aaPredicted RBP22.94■■□□□ 1.26
RTCA-201ENST00000260563 MYL1P05976 194 aa22.94■■□□□ 1.26
RTCA-201ENST00000260563 THPOP40225 353 aa22.94■■□□□ 1.26
RTCA-201ENST00000260563 RINT1Q6NUQ1 792 aa22.94■■□□□ 1.26
RTCA-201ENST00000260563 GPBP1Q86WP2 473 aa22.94■■□□□ 1.26
RTCA-201ENST00000260563 TCP11Q8WWU5 503 aa22.94■■□□□ 1.26
RTCA-201ENST00000260563 RUSC1Q9BVN2 902 aa22.94■■□□□ 1.26
RTCA-201ENST00000260563 HIPK3Q9H422 1215 aa22.94■■□□□ 1.26
RTCA-201ENST00000260563 XPNPEP1Q9NQW7 623 aa22.94■■□□□ 1.26
RTCA-201ENST00000260563 SCN5AQ14524 2016 aa22.94■■□□□ 1.26
RTCA-201ENST00000260563 CAND2O75155 1236 aa22.93■■□□□ 1.26
RTCA-201ENST00000260563 CYP11B2P19099 503 aa22.93■■□□□ 1.26
RTCA-201ENST00000260563 ZNF445P59923 1031 aa22.93■■□□□ 1.26
RTCA-201ENST00000260563 TRIM71Q2Q1W2 868 aaKnown RBP22.93■■□□□ 1.26
RTCA-201ENST00000260563 LRRC27Q9C0I9 530 aa22.93■■□□□ 1.26
RTCA-201ENST00000260563 PITPNM1O00562 1244 aa22.92■■□□□ 1.26
RTCA-201ENST00000260563 CASP1P29466 404 aa22.92■■□□□ 1.26
RTCA-201ENST00000260563 RGS19P49795 217 aa22.92■■□□□ 1.26
RTCA-201ENST00000260563 RBL2Q08999 1139 aa22.92■■□□□ 1.26
RTCA-201ENST00000260563 DPYDQ12882 1025 aa22.92■■□□□ 1.26
RTCA-201ENST00000260563 DRP2Q13474 957 aa22.92■■□□□ 1.26
RTCA-201ENST00000260563 CUL4BQ13620 913 aa22.92■■□□□ 1.26
RTCA-201ENST00000260563 C1orf186Q6ZWK4 172 aa22.92■■□□□ 1.26
RTCA-201ENST00000260563 MAEAQ7L5Y9 396 aa22.92■■□□□ 1.26
RTCA-201ENST00000260563 RPAINQ86UA6 219 aa22.92■■□□□ 1.26
RTCA-201ENST00000260563 KIAA0319LQ8IZA0 1049 aa22.92■■□□□ 1.26
RTCA-201ENST00000260563 NME8Q8N427 588 aa22.92■■□□□ 1.26
RTCA-201ENST00000260563 TMEM143Q96AN5 459 aa22.92■■□□□ 1.26
RTCA-201ENST00000260563 NOC4LQ9BVI4 516 aaKnown RBP22.92■■□□□ 1.26
RTCA-201ENST00000260563 PPP1R12CQ9BZL4 782 aa22.92■■□□□ 1.26
RTCA-201ENST00000260563 BLZF1Q9H2G9 400 aa22.92■■□□□ 1.26
RTCA-201ENST00000260563 PCDHA5Q9Y5H7 936 aa22.92■■□□□ 1.26
RTCA-201ENST00000260563 M0QZ92 97 aa22.92■■□□□ 1.26
RTCA-201ENST00000260563 KIAA0355O15063 1070 aa22.92■■□□□ 1.26
RTCA-201ENST00000260563 SMC2O95347 1197 aa22.92■■□□□ 1.26
RTCA-201ENST00000260563 VTNP04004 478 aa22.92■■□□□ 1.26
RTCA-201ENST00000260563 CKBP12277 381 aa22.92■■□□□ 1.26
RTCA-201ENST00000260563 MKRN4PQ13434 485 aaPredicted RBP22.92■■□□□ 1.26
RTCA-201ENST00000260563 FAM102BQ5T8I3 360 aa22.92■■□□□ 1.26
RTCA-201ENST00000260563 IER5Q5VY09 327 aa22.92■■□□□ 1.26
RTCA-201ENST00000260563 PSPC1Q8WXF1 523 aaKnown RBP22.92■■□□□ 1.26
RTCA-201ENST00000260563 SMARCE1Q969G3 411 aa22.92■■□□□ 1.26
RTCA-201ENST00000260563 C7orf25Q9BPX7 421 aa22.92■■□□□ 1.26
RTCA-201ENST00000260563 TIPINQ9BVW5 301 aa22.92■■□□□ 1.26
RTCA-201ENST00000260563 SUCLA2Q9P2R7 463 aaPredicted RBP22.92■■□□□ 1.26
RTCA-201ENST00000260563 KRT18P05783 430 aaKnown RBP22.91■■□□□ 1.26
RTCA-201ENST00000260563 CTSHP09668 335 aa22.91■■□□□ 1.26
RTCA-201ENST00000260563 GUCY2CP25092 1073 aa22.91■■□□□ 1.26
RTCA-201ENST00000260563 TMEM62Q0P6H9 643 aa22.91■■□□□ 1.26
RTCA-201ENST00000260563 SASS6Q6UVJ0 657 aa22.91■■□□□ 1.26
RTCA-201ENST00000260563 TRIM9Q9C026 710 aa22.91■■□□□ 1.26
RTCA-201ENST00000260563 POLR3FQ9H1D9 316 aaPredicted RBP22.91■■□□□ 1.26
RTCA-201ENST00000260563 TRIM43BA6NCK2 446 aa22.9■■□□□ 1.26
RTCA-201ENST00000260563 MYMKA6NI61 221 aa22.9■■□□□ 1.26
RTCA-201ENST00000260563 RAG1P15918 1043 aa22.9■■□□□ 1.26
RTCA-201ENST00000260563 SARSP49591 514 aaKnown RBP22.9■■□□□ 1.26
RTCA-201ENST00000260563 MRPS6P82932 125 aaKnown RBP22.9■■□□□ 1.26
RTCA-201ENST00000260563 RAD51AP2Q09MP3 1159 aa22.9■■□□□ 1.26
RTCA-201ENST00000260563 ZNF618Q5T7W0 954 aa22.9■■□□□ 1.26
RTCA-201ENST00000260563 NT5DC1Q5TFE4 455 aa22.9■■□□□ 1.26
RTCA-201ENST00000260563 LRSAM1Q6UWE0 723 aa22.9■■□□□ 1.26
RTCA-201ENST00000260563 RHPN2Q8IUC4 686 aa22.9■■□□□ 1.26
RTCA-201ENST00000260563 SPATA20Q8TB22 786 aa22.9■■□□□ 1.26
RTCA-201ENST00000260563 TRIM43Q96BQ3 446 aaPredicted RBP22.9■■□□□ 1.26
RTCA-201ENST00000260563 GPRC5CQ9NQ84 441 aa22.9■■□□□ 1.26
RTCA-201ENST00000260563 COL4A3BPQ9Y5P4 624 aa22.9■■□□□ 1.26
RTCA-201ENST00000260563 UMODL1Q5DID0 1318 aa22.9■■□□□ 1.26
RTCA-201ENST00000260563 HIP1RO75146 1068 aa22.89■■□□□ 1.26
RTCA-201ENST00000260563 SELPP16109 830 aa22.89■■□□□ 1.26
RTCA-201ENST00000260563 ARSHQ5FYA8 562 aa22.89■■□□□ 1.26
RTCA-201ENST00000260563 LRRC8DQ7L1W4 858 aa22.89■■□□□ 1.26
RTCA-201ENST00000260563 KIFAP3Q92845 792 aa22.89■■□□□ 1.26
RTCA-201ENST00000260563 DRC1Q96MC2 740 aa22.89■■□□□ 1.26
RTCA-201ENST00000260563 SCLT1Q96NL6 688 aa22.89■■□□□ 1.26
RTCA-201ENST00000260563 PPP1R16BQ96T49 567 aa22.89■■□□□ 1.26
RTCA-201ENST00000260563 FUCA2Q9BTY2 467 aa22.89■■□□□ 1.26
RTCA-201ENST00000260563 TRPV2Q9Y5S1 764 aa22.89■■□□□ 1.26
RTCA-201ENST00000260563 NR2E3Q9Y5X4 410 aa22.89■■□□□ 1.26
RTCA-201ENST00000260563 CDY2AQ9Y6F7 541 aa22.89■■□□□ 1.26
RTCA-201ENST00000260563 TIMP1P01033 207 aa22.88■■□□□ 1.25
RTCA-201ENST00000260563 CCDC192P0DO97 292 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms