RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 KDSRQ06136 332 aa10.43□□□□□ -0.74
CTDSPL2-201ENST00000260327 PFKFB3Q16875 520 aaPredicted RBP10.43□□□□□ -0.74
CTDSPL2-201ENST00000260327 WDR75Q8IWA0 830 aaKnown RBP10.43□□□□□ -0.74
CTDSPL2-201ENST00000260327 TEX9Q8N6V9 391 aa10.43□□□□□ -0.74
CTDSPL2-201ENST00000260327 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.43□□□□□ -0.747e-7■□□□□ 8.7
CTDSPL2-201ENST00000260327 TFR2Q9UP52 801 aa10.43□□□□□ -0.74
CTDSPL2-201ENST00000260327 MROH7-TTC4A0A0A0MT08 1334 aa10.42□□□□□ -0.74
CTDSPL2-201ENST00000260327 TRPM8Q7Z2W7 1104 aa10.42□□□□□ -0.74
CTDSPL2-201ENST00000260327 FUT8Q9BYC5 575 aa10.42□□□□□ -0.74
CTDSPL2-201ENST00000260327 ING2Q9H160 280 aa10.42□□□□□ -0.74
CTDSPL2-201ENST00000260327 ZNF229Q9UJW7 825 aa10.42□□□□□ -0.74
CTDSPL2-201ENST00000260327 MRPL11Q9Y3B7 192 aaKnown RBP10.42□□□□□ -0.74
CTDSPL2-201ENST00000260327 A0A1B0GTH6 734 aa10.42□□□□□ -0.74
CTDSPL2-201ENST00000260327 GOLGA8IPA6NC78 632 aa10.42□□□□□ -0.74
CTDSPL2-201ENST00000260327 GOLGA8JA6NMD2 632 aa10.42□□□□□ -0.74
CTDSPL2-201ENST00000260327 SKOR1P84550 965 aa10.42□□□□□ -0.74
CTDSPL2-201ENST00000260327 CTTNQ14247 550 aaKnown RBP10.42□□□□□ -0.74
CTDSPL2-201ENST00000260327 FAM83BQ5T0W9 1011 aa10.42□□□□□ -0.74
CTDSPL2-201ENST00000260327 USP49Q70CQ1 688 aa10.42□□□□□ -0.74
CTDSPL2-201ENST00000260327 METTL13Q8N6R0 699 aa10.42□□□□□ -0.74
CTDSPL2-201ENST00000260327 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.42□□□□□ -0.74
CTDSPL2-201ENST00000260327 ABCC3O15438 1527 aa10.42□□□□□ -0.74
CTDSPL2-201ENST00000260327 SPHKAPQ2M3C7 1700 aa10.42□□□□□ -0.74
CTDSPL2-201ENST00000260327 ENO1P06733 434 aaKnown RBP10.42□□□□□ -0.74
CTDSPL2-201ENST00000260327 HSPA9P38646 679 aaKnown RBP10.42□□□□□ -0.74
CTDSPL2-201ENST00000260327 IL6STP40189 918 aaPredicted RBP10.42□□□□□ -0.74
CTDSPL2-201ENST00000260327 CRYMQ14894 314 aa10.42□□□□□ -0.74
CTDSPL2-201ENST00000260327 PTGISQ16647 500 aa10.42□□□□□ -0.74
CTDSPL2-201ENST00000260327 RABGAP1LQ5R372 815 aa10.42□□□□□ -0.74
CTDSPL2-201ENST00000260327 TMTC4Q5T4D3 741 aa10.42□□□□□ -0.74
CTDSPL2-201ENST00000260327 GLG1Q92896 1179 aa10.42□□□□□ -0.74
CTDSPL2-201ENST00000260327 CDCA7Q9BWT1 371 aaPredicted RBP10.42□□□□□ -0.74
CTDSPL2-201ENST00000260327 BHMT2Q9H2M3 363 aa10.42□□□□□ -0.74
CTDSPL2-201ENST00000260327 KANSL2Q9H9L4 492 aa10.42□□□□□ -0.74
CTDSPL2-201ENST00000260327 SNX12Q9UMY4 172 aa10.42□□□□□ -0.74
CTDSPL2-201ENST00000260327 PPP1R12AO14974 1030 aaPredicted RBP10.42□□□□□ -0.74
CTDSPL2-201ENST00000260327 TMED10P49755 219 aaKnown RBP10.42□□□□□ -0.74
CTDSPL2-201ENST00000260327 NR1I3Q14994 352 aa10.42□□□□□ -0.74
CTDSPL2-201ENST00000260327 SMAD1Q15797 465 aaKnown RBP10.42□□□□□ -0.74
CTDSPL2-201ENST00000260327 GPATCH4Q5T3I0 446 aaKnown RBP10.42□□□□□ -0.74
CTDSPL2-201ENST00000260327 SUSD4Q5VX71 490 aa10.42□□□□□ -0.74
CTDSPL2-201ENST00000260327 RNF169Q8NCN4 708 aa10.42□□□□□ -0.74
CTDSPL2-201ENST00000260327 CTDNEP1O95476 244 aa10.42□□□□□ -0.74
CTDSPL2-201ENST00000260327 GAP43P17677 238 aa10.42□□□□□ -0.74
CTDSPL2-201ENST00000260327 KCNH2Q12809 1159 aa10.42□□□□□ -0.74
CTDSPL2-201ENST00000260327 NCAPHQ15003 741 aa10.42□□□□□ -0.74
CTDSPL2-201ENST00000260327 PIGOQ8TEQ8 1089 aa10.42□□□□□ -0.74
CTDSPL2-201ENST00000260327 XPO6Q96QU8 1125 aaKnown RBP10.42□□□□□ -0.74
CTDSPL2-201ENST00000260327 AGPAT5Q9NUQ2 364 aa10.42□□□□□ -0.74
CTDSPL2-201ENST00000260327 DONSONQ9NYP3 566 aa10.42□□□□□ -0.74
CTDSPL2-201ENST00000260327 TMOD4Q9NZQ9 345 aa10.42□□□□□ -0.74
CTDSPL2-201ENST00000260327 LCMT1Q9UIC8 334 aa10.42□□□□□ -0.74
CTDSPL2-201ENST00000260327 GRID2IPA4D2P6 1211 aa10.41□□□□□ -0.74
CTDSPL2-201ENST00000260327 HOXA13P31271 388 aaPredicted RBP10.41□□□□□ -0.74
CTDSPL2-201ENST00000260327 NEK2P51955 445 aa10.41□□□□□ -0.74
CTDSPL2-201ENST00000260327 PDIK1LQ8N165 341 aa10.41□□□□□ -0.74
CTDSPL2-201ENST00000260327 KCTD6Q8NC69 237 aa10.41□□□□□ -0.74
CTDSPL2-201ENST00000260327 GPR101Q96P66 508 aaPredicted RBP10.41□□□□□ -0.74
CTDSPL2-201ENST00000260327 LIMA1Q9UHB6 759 aaKnown RBP10.41□□□□□ -0.74
CTDSPL2-201ENST00000260327 TLK1Q9UKI8 766 aa10.41□□□□□ -0.74
CTDSPL2-201ENST00000260327 USP15Q9Y4E8 981 aaPredicted RBP10.41□□□□□ -0.74
CTDSPL2-201ENST00000260327 RNF103-CHMP3A0A140T963 221 aa10.41□□□□□ -0.74
CTDSPL2-201ENST00000260327 A6NJR5 290 aa10.41□□□□□ -0.74
CTDSPL2-201ENST00000260327 GDF11O95390 407 aa10.41□□□□□ -0.74
CTDSPL2-201ENST00000260327 OCRLQ01968 901 aa10.41□□□□□ -0.74
CTDSPL2-201ENST00000260327 RASGRP2Q7LDG7 609 aa10.41□□□□□ -0.74
CTDSPL2-201ENST00000260327 MYLK4Q86YV6 388 aaPredicted RBP10.41□□□□□ -0.74
CTDSPL2-201ENST00000260327 DNAAF3Q8N9W5 541 aa10.41□□□□□ -0.74
CTDSPL2-201ENST00000260327 CCNYQ8ND76 341 aa10.41□□□□□ -0.74
CTDSPL2-201ENST00000260327 THAP11Q96EK4 314 aa10.41□□□□□ -0.74
CTDSPL2-201ENST00000260327 TRIM51Q9BSJ1 452 aa10.41□□□□□ -0.74
CTDSPL2-201ENST00000260327 TMEM260Q9NX78 707 aa10.41□□□□□ -0.74
CTDSPL2-201ENST00000260327 SYCE1LA8MT33 242 aa10.41□□□□□ -0.74
CTDSPL2-201ENST00000260327 E9PMD0 336 aa10.41□□□□□ -0.74
CTDSPL2-201ENST00000260327 POLR2BP30876 1174 aaKnown RBP10.41□□□□□ -0.74
CTDSPL2-201ENST00000260327 YWHAEP62258 255 aaKnown RBP10.41□□□□□ -0.74
CTDSPL2-201ENST00000260327 LAMB3Q13751 1172 aa10.41□□□□□ -0.74
CTDSPL2-201ENST00000260327 ABCB5Q2M3G0 1257 aa10.41□□□□□ -0.74
CTDSPL2-201ENST00000260327 MDM1Q8TC05 714 aa10.41□□□□□ -0.74
CTDSPL2-201ENST00000260327 ERP27Q96DN0 273 aa10.41□□□□□ -0.74
CTDSPL2-201ENST00000260327 ASCC2Q9H1I8 757 aaPredicted RBP10.41□□□□□ -0.74
CTDSPL2-201ENST00000260327 ZWILCHQ9H900 591 aa10.41□□□□□ -0.74
CTDSPL2-201ENST00000260327 PARVGQ9HBI0 331 aa10.41□□□□□ -0.74
CTDSPL2-201ENST00000260327 DNAJC12Q9UKB3 198 aa10.41□□□□□ -0.74
CTDSPL2-201ENST00000260327 NLRP1Q9C000 1473 aa10.41□□□□□ -0.74
CTDSPL2-201ENST00000260327 FOSP01100 380 aaPredicted RBP10.41□□□□□ -0.74
CTDSPL2-201ENST00000260327 H2AFXP16104 143 aaPredicted RBP10.41□□□□□ -0.74
CTDSPL2-201ENST00000260327 ATP2B4P23634 1241 aa10.41□□□□□ -0.74
CTDSPL2-201ENST00000260327 MRPS15P82914 257 aaKnown RBP10.41□□□□□ -0.74
CTDSPL2-201ENST00000260327 LONRF1Q17RB8 773 aa10.41□□□□□ -0.74
CTDSPL2-201ENST00000260327 ANKRD40Q6AI12 368 aa10.41□□□□□ -0.74
CTDSPL2-201ENST00000260327 HOOK2Q96ED9 719 aa10.41□□□□□ -0.74
CTDSPL2-201ENST00000260327 RMDN2Q96LZ7 410 aa10.41□□□□□ -0.74
CTDSPL2-201ENST00000260327 RBM12Q9NTZ6 932 aaKnown RBP10.41□□□□□ -0.74
CTDSPL2-201ENST00000260327 CCT8L1PA6NM43 557 aa10.41□□□□□ -0.74
CTDSPL2-201ENST00000260327 KCNJ6P48051 423 aa10.41□□□□□ -0.74
CTDSPL2-201ENST00000260327 CDK8P49336 464 aa10.41□□□□□ -0.74
CTDSPL2-201ENST00000260327 MKRN4PQ13434 485 aaPredicted RBP10.41□□□□□ -0.74
CTDSPL2-201ENST00000260327 PLCB4Q15147 1175 aa10.41□□□□□ -0.74
CTDSPL2-201ENST00000260327 AOC3Q16853 763 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms