RNA–Protein interactions for RNA: ENST00000258613.4

THSD1-201, Transcript of thrombospondin type 1 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THSD1, Length 2,962 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THSD1-201ENST00000258613 SLC18A3Q16572 532 aa14.34□□□□□ -0.11
THSD1-201ENST00000258613 ZNF771Q7L3S4 317 aaPredicted RBP14.34□□□□□ -0.11
THSD1-201ENST00000258613 MSANTD4Q8NCY6 345 aa14.34□□□□□ -0.11
THSD1-201ENST00000258613 TRIM58Q8NG06 486 aa14.34□□□□□ -0.11
THSD1-201ENST00000258613 OSBPL9Q96SU4 736 aa14.34□□□□□ -0.11
THSD1-201ENST00000258613 MTFR1LQ9H019 292 aa14.34□□□□□ -0.11
THSD1-201ENST00000258613 PXMP2Q9NR77 195 aa14.34□□□□□ -0.11
THSD1-201ENST00000258613 HYOU1Q9Y4L1 999 aa14.34□□□□□ -0.11
THSD1-201ENST00000258613 CCDC151A5D8V7 595 aa14.33□□□□□ -0.12
THSD1-201ENST00000258613 PHACTR2O75167 634 aa14.33□□□□□ -0.12
THSD1-201ENST00000258613 P4HBP07237 508 aaKnown RBP14.33□□□□□ -0.12
THSD1-201ENST00000258613 PSMC2P35998 433 aaKnown RBP14.33□□□□□ -0.12
THSD1-201ENST00000258613 ZNF131P52739 623 aa14.33□□□□□ -0.12
THSD1-201ENST00000258613 XKR9Q5GH70 373 aa14.33□□□□□ -0.12
THSD1-201ENST00000258613 FAM102BQ5T8I3 360 aa14.33□□□□□ -0.12
THSD1-201ENST00000258613 PCNX4Q63HM2 1172 aa14.33□□□□□ -0.12
THSD1-201ENST00000258613 FOXR2Q6PJQ5 311 aa14.33□□□□□ -0.12
THSD1-201ENST00000258613 GBP6Q6ZN66 633 aa14.33□□□□□ -0.12
THSD1-201ENST00000258613 CNPY4Q8N129 248 aa14.33□□□□□ -0.12
THSD1-201ENST00000258613 ACP6Q9NPH0 428 aa14.33□□□□□ -0.12
THSD1-201ENST00000258613 CHORDC1Q9UHD1 332 aaPredicted RBP14.33□□□□□ -0.12
THSD1-201ENST00000258613 CEP350Q5VT06 3117 aa14.33□□□□□ -0.12
THSD1-201ENST00000258613 SSU72P8A0A1W2PR75 194 aa14.33□□□□□ -0.12
THSD1-201ENST00000258613 ZBED4O75132 1171 aa14.33□□□□□ -0.12
THSD1-201ENST00000258613 RGS20O76081 388 aa14.33□□□□□ -0.12
THSD1-201ENST00000258613 QARSP47897 775 aaKnown RBP14.33□□□□□ -0.12
THSD1-201ENST00000258613 TMEM132BQ14DG7 1078 aa14.33□□□□□ -0.12
THSD1-201ENST00000258613 HS2ST1Q7LGA3 356 aa14.33□□□□□ -0.12
THSD1-201ENST00000258613 ZNF280CQ8ND82 737 aa14.33□□□□□ -0.12
THSD1-201ENST00000258613 EHBP1Q8NDI1 1231 aa14.33□□□□□ -0.12
THSD1-201ENST00000258613 PDE11AQ9HCR9 933 aa14.33□□□□□ -0.12
THSD1-201ENST00000258613 AIPL1Q9NZN9 384 aa14.33□□□□□ -0.12
THSD1-201ENST00000258613 DMGDHQ9UI17 866 aaKnown RBP14.33□□□□□ -0.12
THSD1-201ENST00000258613 JRKLQ9Y4A0 524 aa14.33□□□□□ -0.12
THSD1-201ENST00000258613 FZD9O00144 591 aa14.32□□□□□ -0.12
THSD1-201ENST00000258613 SMC1AQ14683 1233 aaKnown RBP14.32□□□□□ -0.12
THSD1-201ENST00000258613 ZNF662Q6ZS27 426 aa14.32□□□□□ -0.12
THSD1-201ENST00000258613 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.32□□□□□ -0.12
THSD1-201ENST00000258613 PALB2Q86YC2 1186 aa14.32□□□□□ -0.12
THSD1-201ENST00000258613 MCF2L2Q86YR7 1114 aa14.32□□□□□ -0.12
THSD1-201ENST00000258613 CCDC43Q96MW1 224 aaKnown RBP14.32□□□□□ -0.12
THSD1-201ENST00000258613 POP1Q99575 1024 aaKnown RBP14.32□□□□□ -0.12
THSD1-201ENST00000258613 LRRC1Q9BTT6 524 aa14.32□□□□□ -0.12
THSD1-201ENST00000258613 VPS33BQ9H267 617 aa14.32□□□□□ -0.12
THSD1-201ENST00000258613 PICK1Q9NRD5 415 aa14.32□□□□□ -0.12
THSD1-201ENST00000258613 NR3C2P08235 984 aa14.32□□□□□ -0.12
THSD1-201ENST00000258613 OAS2P29728 719 aaKnown RBP14.32□□□□□ -0.12
THSD1-201ENST00000258613 GCLMP48507 274 aa14.32□□□□□ -0.12
THSD1-201ENST00000258613 FMO5P49326 533 aa14.32□□□□□ -0.12
THSD1-201ENST00000258613 USP14P54578 494 aa14.32□□□□□ -0.12
THSD1-201ENST00000258613 SCYL3Q8IZE3 742 aa14.32□□□□□ -0.12
THSD1-201ENST00000258613 PLEKHO2Q8TD55 490 aa14.32□□□□□ -0.12
THSD1-201ENST00000258613 SAAL1Q96ER3 474 aa14.32□□□□□ -0.12
THSD1-201ENST00000258613 TSGA10Q9BZW7 698 aa14.32□□□□□ -0.12
THSD1-201ENST00000258613 RAB21Q9UL25 225 aa14.32□□□□□ -0.12
THSD1-201ENST00000258613 CCDC169A6NNP5 214 aa14.31□□□□□ -0.12
THSD1-201ENST00000258613 LRRIQ3A6PVS8 624 aaPredicted RBP14.31□□□□□ -0.12
THSD1-201ENST00000258613 SLC26A4O43511 780 aa14.31□□□□□ -0.12
THSD1-201ENST00000258613 ANO5Q75V66 913 aa14.31□□□□□ -0.12
THSD1-201ENST00000258613 KAT5Q92993 513 aa14.31□□□□□ -0.12
THSD1-201ENST00000258613 NOX5Q96PH1 765 aa14.31□□□□□ -0.12
THSD1-201ENST00000258613 TCEAL9Q9UHQ7 104 aa14.31□□□□□ -0.12
THSD1-201ENST00000258613 ZSCAN5CA6NGD5 496 aaPredicted RBP14.31□□□□□ -0.12
THSD1-201ENST00000258613 NOP2P46087 812 aaKnown RBP14.31□□□□□ -0.12
THSD1-201ENST00000258613 PPP3CAQ08209 521 aa14.31□□□□□ -0.12
THSD1-201ENST00000258613 ARHGAP27Q6ZUM4 889 aa14.31□□□□□ -0.12
THSD1-201ENST00000258613 GLYCTKQ8IVS8 523 aa14.31□□□□□ -0.12
THSD1-201ENST00000258613 U2AF1L4Q8WU68 220 aaKnown RBP14.31□□□□□ -0.12
THSD1-201ENST00000258613 IQCDQ96DY2 449 aa14.31□□□□□ -0.12
THSD1-201ENST00000258613 EDEM3Q9BZQ6 932 aa14.31□□□□□ -0.12
THSD1-201ENST00000258613 DNAJC12Q9UKB3 198 aa14.31□□□□□ -0.12
THSD1-201ENST00000258613 ZNF214Q9UL59 606 aaPredicted RBP14.31□□□□□ -0.12
THSD1-201ENST00000258613 L1RE1Q9UN81 338 aa14.31□□□□□ -0.12
THSD1-201ENST00000258613 ZNF862O60290 1169 aa14.31□□□□□ -0.12
THSD1-201ENST00000258613 EVI5O60447 810 aa14.31□□□□□ -0.12
THSD1-201ENST00000258613 CNTN2Q02246 1040 aa14.31□□□□□ -0.12
THSD1-201ENST00000258613 DRAP1Q14919 205 aaPredicted RBP14.31□□□□□ -0.12
THSD1-201ENST00000258613 PHLDB3Q6NSJ2 640 aa14.31□□□□□ -0.12
THSD1-201ENST00000258613 ALKBH5Q6P6C2 394 aaKnown RBP14.31□□□□□ -0.12
THSD1-201ENST00000258613 HAUS6Q7Z4H7 955 aa14.31□□□□□ -0.12
THSD1-201ENST00000258613 ZNF526Q8TF50 670 aaPredicted RBP14.31□□□□□ -0.12
THSD1-201ENST00000258613 BSNDQ8WZ55 320 aa14.31□□□□□ -0.12
THSD1-201ENST00000258613 CCDC127Q96BQ5 260 aa14.31□□□□□ -0.12
THSD1-201ENST00000258613 SEPT11Q9NVA2 429 aaKnown RBP14.31□□□□□ -0.12
THSD1-201ENST00000258613 NAGPAQ9UK23 515 aa14.31□□□□□ -0.12
THSD1-201ENST00000258613 FRMD4BQ9Y2L6 1034 aa14.31□□□□□ -0.12
THSD1-201ENST00000258613 ANKRD63C9JTQ0 380 aa14.3□□□□□ -0.12
THSD1-201ENST00000258613 DDX3XO00571 662 aaKnown RBP eCLIP14.3□□□□□ -0.12
THSD1-201ENST00000258613 EIF3DO15371 548 aaKnown RBP eCLIP14.3□□□□□ -0.12
THSD1-201ENST00000258613 PJA2O43164 708 aa14.3□□□□□ -0.12
THSD1-201ENST00000258613 PPP1R37O75864 691 aa14.3□□□□□ -0.12
THSD1-201ENST00000258613 CALCAP01258 141 aa14.3□□□□□ -0.12
THSD1-201ENST00000258613 ABCB4P21439 1286 aa14.3□□□□□ -0.12
THSD1-201ENST00000258613 GUCY2CP25092 1073 aa14.3□□□□□ -0.12
THSD1-201ENST00000258613 BRD3Q15059 726 aa14.3□□□□□ -0.12
THSD1-201ENST00000258613 MOB2Q70IA6 237 aa14.3□□□□□ -0.12
THSD1-201ENST00000258613 ALS2CR12Q96Q35 445 aa14.3□□□□□ -0.12
THSD1-201ENST00000258613 METTL14Q9HCE5 456 aaKnown RBP14.3□□□□□ -0.12
THSD1-201ENST00000258613 RBM12Q9NTZ6 932 aaKnown RBP14.3□□□□□ -0.12
THSD1-201ENST00000258613 TAS2R14Q9NYV8 317 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms