RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 AP3B1O00203 1094 aa14.49□□□□□ -0.09
PRPF38A-201ENST00000257181 ARHGAP6O43182 974 aa14.49□□□□□ -0.09
PRPF38A-201ENST00000257181 RASA1P20936 1047 aa14.49□□□□□ -0.09
PRPF38A-201ENST00000257181 PTGS1P23219 599 aa14.49□□□□□ -0.09
PRPF38A-201ENST00000257181 DDIT3P35638 169 aa14.49□□□□□ -0.09
PRPF38A-201ENST00000257181 MAP7D1Q3KQU3 841 aa14.49□□□□□ -0.09
PRPF38A-201ENST00000257181 TTBK2Q6IQ55 1244 aa14.49□□□□□ -0.09
PRPF38A-201ENST00000257181 TRIM58Q8NG06 486 aa14.49□□□□□ -0.09
PRPF38A-201ENST00000257181 ITKQ08881 620 aa14.49□□□□□ -0.09
PRPF38A-201ENST00000257181 MAP1SQ66K74 1059 aaPredicted RBP14.49□□□□□ -0.09
PRPF38A-201ENST00000257181 DNAJC24Q6P3W2 148 aa14.49□□□□□ -0.09
PRPF38A-201ENST00000257181 ITIH5Q86UX2 942 aa14.49□□□□□ -0.09
PRPF38A-201ENST00000257181 TBC1D10CQ8IV04 446 aa14.49□□□□□ -0.09
PRPF38A-201ENST00000257181 SAMD15Q9P1V8 674 aa14.49□□□□□ -0.09
PRPF38A-201ENST00000257181 ZW10O43264 779 aa14.49□□□□□ -0.09
PRPF38A-201ENST00000257181 DAGLBQ8NCG7 672 aa14.49□□□□□ -0.09
PRPF38A-201ENST00000257181 FAM149B1Q96BN6 582 aa14.49□□□□□ -0.09
PRPF38A-201ENST00000257181 LXNQ9BS40 222 aa14.49□□□□□ -0.09
PRPF38A-201ENST00000257181 SPATC1LQ9H0A9 340 aa14.49□□□□□ -0.09
PRPF38A-201ENST00000257181 ZCCHC17Q9NP64 241 aaKnown RBP14.49□□□□□ -0.09
PRPF38A-201ENST00000257181 TMEM39AQ9NV64 488 aa14.49□□□□□ -0.09
PRPF38A-201ENST00000257181 IKBKBO14920 756 aa14.49□□□□□ -0.09
PRPF38A-201ENST00000257181 LRG1P02750 347 aa14.49□□□□□ -0.09
PRPF38A-201ENST00000257181 CTTNQ14247 550 aaKnown RBP14.49□□□□□ -0.09
PRPF38A-201ENST00000257181 DUOXA2Q1HG44 320 aa14.49□□□□□ -0.09
PRPF38A-201ENST00000257181 RYBPQ8N488 228 aaPredicted RBP14.49□□□□□ -0.09
PRPF38A-201ENST00000257181 GPATCH11Q8N954 259 aa14.49□□□□□ -0.09
PRPF38A-201ENST00000257181 RABGGTAQ92696 567 aa14.49□□□□□ -0.09
PRPF38A-201ENST00000257181 GJA10Q969M2 543 aa14.49□□□□□ -0.09
PRPF38A-201ENST00000257181 MYO1FO00160 1098 aa14.48□□□□□ -0.09
PRPF38A-201ENST00000257181 TOMM70O94826 608 aa14.48□□□□□ -0.09
PRPF38A-201ENST00000257181 DDX5P17844 614 aaKnown RBP14.48□□□□□ -0.09
PRPF38A-201ENST00000257181 TMEM35BQ8NCS4 154 aa14.48□□□□□ -0.09
PRPF38A-201ENST00000257181 POLIQ9UNA4 740 aa14.48□□□□□ -0.09
PRPF38A-201ENST00000257181 USTQ9Y2C2 406 aa14.48□□□□□ -0.09
PRPF38A-201ENST00000257181 UQCRHLA0A096LP55 91 aa14.48□□□□□ -0.09
PRPF38A-201ENST00000257181 ERCC3P19447 782 aa14.48□□□□□ -0.09
PRPF38A-201ENST00000257181 PSMC4P43686 418 aa14.48□□□□□ -0.09
PRPF38A-201ENST00000257181 HOMEZQ8IX15 550 aa14.48□□□□□ -0.09
PRPF38A-201ENST00000257181 THNSL1Q8IYQ7 743 aa14.48□□□□□ -0.09
PRPF38A-201ENST00000257181 RAB42Q8N4Z0 105 aa14.48□□□□□ -0.09
PRPF38A-201ENST00000257181 DYDC2Q96IM9 177 aa14.48□□□□□ -0.09
PRPF38A-201ENST00000257181 PRMT6Q96LA8 375 aaPredicted RBP14.48□□□□□ -0.09
PRPF38A-201ENST00000257181 BHMT2Q9H2M3 363 aa14.48□□□□□ -0.09
PRPF38A-201ENST00000257181 PLCB1Q9NQ66 1216 aa14.48□□□□□ -0.09
PRPF38A-201ENST00000257181 GOLGA8QA0A0J9YX86 632 aa14.48□□□□□ -0.09
PRPF38A-201ENST00000257181 GOLGA8OA6NCC3 632 aa14.48□□□□□ -0.09
PRPF38A-201ENST00000257181 GOLGA8NF8WBI6 632 aa14.48□□□□□ -0.09
PRPF38A-201ENST00000257181 YWHABP31946 246 aaKnown RBP14.48□□□□□ -0.09
PRPF38A-201ENST00000257181 DDR1Q08345 913 aa14.48□□□□□ -0.09
PRPF38A-201ENST00000257181 IFRD2Q12894 506 aaPredicted RBP14.48□□□□□ -0.09
PRPF38A-201ENST00000257181 NECAB2Q7Z6G3 386 aa14.48□□□□□ -0.09
PRPF38A-201ENST00000257181 TTC25Q96NG3 672 aa14.48□□□□□ -0.09
PRPF38A-201ENST00000257181 BLZF1Q9H2G9 400 aa14.48□□□□□ -0.09
PRPF38A-201ENST00000257181 DIS3Q9Y2L1 958 aaKnown RBP14.48□□□□□ -0.09
PRPF38A-201ENST00000257181 SLC16A3O15427 465 aaKnown RBP14.48□□□□□ -0.09
PRPF38A-201ENST00000257181 NME8Q8N427 588 aa14.48□□□□□ -0.09
PRPF38A-201ENST00000257181 U2AF1L4Q8WU68 220 aaKnown RBP14.48□□□□□ -0.09
PRPF38A-201ENST00000257181 NAPGQ99747 312 aaPredicted RBP14.48□□□□□ -0.09
PRPF38A-201ENST00000257181 TRIM7Q9C029 511 aa14.48□□□□□ -0.09
PRPF38A-201ENST00000257181 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.48□□□□□ -0.09
PRPF38A-201ENST00000257181 V9GYY5 206 aaPredicted RBP14.48□□□□□ -0.09
PRPF38A-201ENST00000257181 PRPSAP2O60256 369 aa14.47□□□□□ -0.09
PRPF38A-201ENST00000257181 ONECUT3O60422 494 aaPredicted RBP14.47□□□□□ -0.09
PRPF38A-201ENST00000257181 NAALADL2Q58DX5 795 aa14.47□□□□□ -0.09
PRPF38A-201ENST00000257181 KIAA1755Q5JYT7 1200 aa14.47□□□□□ -0.09
PRPF38A-201ENST00000257181 SRRM1Q8IYB3 904 aaKnown RBP14.47□□□□□ -0.09
PRPF38A-201ENST00000257181 ATG4CQ96DT6 458 aa14.47□□□□□ -0.09
PRPF38A-201ENST00000257181 NRBP1Q9UHY1 535 aa14.47□□□□□ -0.09
PRPF38A-201ENST00000257181 EMSYQ7Z589 1322 aa14.47□□□□□ -0.09
PRPF38A-201ENST00000257181 FGFR2P21802 821 aa14.47□□□□□ -0.09
PRPF38A-201ENST00000257181 CFAP221Q4G0U5 840 aa14.47□□□□□ -0.09
PRPF38A-201ENST00000257181 CMTR1Q8N1G2 835 aaKnown RBP14.47□□□□□ -0.09
PRPF38A-201ENST00000257181 CCDC110Q8TBZ0 833 aa14.47□□□□□ -0.09
PRPF38A-201ENST00000257181 FTHL17Q9BXU8 183 aa14.47□□□□□ -0.09
PRPF38A-201ENST00000257181 TAB2Q9NYJ8 693 aa14.47□□□□□ -0.09
PRPF38A-201ENST00000257181 ADCY3O60266 1144 aa14.47□□□□□ -0.09
PRPF38A-201ENST00000257181 URODP06132 367 aa14.47□□□□□ -0.09
PRPF38A-201ENST00000257181 ACADSBP45954 432 aa14.47□□□□□ -0.09
PRPF38A-201ENST00000257181 SLFNL1Q499Z3 407 aa14.47□□□□□ -0.09
PRPF38A-201ENST00000257181 RRAGAQ7L523 313 aa14.47□□□□□ -0.09
PRPF38A-201ENST00000257181 WNK4Q96J92 1243 aa14.47□□□□□ -0.09
PRPF38A-201ENST00000257181 PRIMPOLQ96LW4 560 aa14.47□□□□□ -0.09
PRPF38A-201ENST00000257181 ASNSD1Q9NWL6 643 aa14.47□□□□□ -0.09
PRPF38A-201ENST00000257181 GUCA1BQ9UMX6 200 aa14.47□□□□□ -0.09
PRPF38A-201ENST00000257181 PPP2R5DQ14738 602 aa14.47□□□□□ -0.09
PRPF38A-201ENST00000257181 DHX38Q92620 1227 aaKnown RBP14.47□□□□□ -0.09
PRPF38A-201ENST00000257181 MAGEB5Q9BZ81 275 aa14.47□□□□□ -0.09
PRPF38A-201ENST00000257181 GLIS2Q9BZE0 524 aaPredicted RBP14.47□□□□□ -0.09
PRPF38A-201ENST00000257181 SLC39A2Q9NP94 309 aa14.47□□□□□ -0.09
PRPF38A-201ENST00000257181 SLIT2O94813 1529 aa14.47□□□□□ -0.09
PRPF38A-201ENST00000257181 EIF2B5Q13144 721 aaKnown RBP14.46□□□□□ -0.09
PRPF38A-201ENST00000257181 KARSQ15046 597 aaKnown RBP14.46□□□□□ -0.09
PRPF38A-201ENST00000257181 MTMR14Q8NCE2 650 aa14.46□□□□□ -0.09
PRPF38A-201ENST00000257181 TSSK1BQ9BXA7 367 aa14.46□□□□□ -0.09
PRPF38A-201ENST00000257181 MTMR6Q9Y217 621 aa14.46□□□□□ -0.09
PRPF38A-201ENST00000257181 ODC1P11926 461 aa14.46□□□□□ -0.09
PRPF38A-201ENST00000257181 KRT39Q6A163 491 aa14.46□□□□□ -0.09
PRPF38A-201ENST00000257181 EIF2AK1Q9BQI3 630 aaKnown RBP14.46□□□□□ -0.09
PRPF38A-201ENST00000257181 RTFDC1Q9BY42 306 aaPredicted RBP14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms