RNA–Protein interactions for RNA: ENST00000254719.9

RPA1-201, Transcript of replication protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA1, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-201ENST00000254719 GDF3Q9NR23 364 aa10.03□□□□□ -0.8
RPA1-201ENST00000254719 SAR1BQ9Y6B6 198 aa10.03□□□□□ -0.8
RPA1-201ENST00000254719 C5orf42Q9H799 3197 aa10.03□□□□□ -0.8
RPA1-201ENST00000254719 RASSF7Q02833 373 aa10.03□□□□□ -0.8
RPA1-201ENST00000254719 PPATQ06203 517 aa10.03□□□□□ -0.8
RPA1-201ENST00000254719 TMEM132AQ24JP5 1023 aa10.03□□□□□ -0.8
RPA1-201ENST00000254719 PRR16Q569H4 304 aa10.03□□□□□ -0.8
RPA1-201ENST00000254719 IQCKQ8N0W5 287 aa10.03□□□□□ -0.8
RPA1-201ENST00000254719 SEC14L1Q92503 715 aa10.03□□□□□ -0.8
RPA1-201ENST00000254719 PSMB7Q99436 277 aa10.03□□□□□ -0.8
RPA1-201ENST00000254719 HAPLN2Q9GZV7 340 aa10.03□□□□□ -0.8
RPA1-201ENST00000254719 STMN4Q9H169 189 aaPredicted RBP10.03□□□□□ -0.8
RPA1-201ENST00000254719 EPB41P11171 864 aaKnown RBP10.02□□□□□ -0.8
RPA1-201ENST00000254719 UCHL3P15374 230 aa10.02□□□□□ -0.8
RPA1-201ENST00000254719 GCFC2P16383 781 aaKnown RBP10.02□□□□□ -0.8
RPA1-201ENST00000254719 PRKCIP41743 596 aa10.02□□□□□ -0.8
RPA1-201ENST00000254719 MUM1L1Q5H9M0 696 aa10.02□□□□□ -0.8
RPA1-201ENST00000254719 POTEAQ6S8J7 498 aa10.02□□□□□ -0.8
RPA1-201ENST00000254719 CROCCP2Q86T23 111 aa10.02□□□□□ -0.8
RPA1-201ENST00000254719 KIRREL3Q8IZU9 778 aa10.02□□□□□ -0.8
RPA1-201ENST00000254719 TRIM58Q8NG06 486 aa10.02□□□□□ -0.8
RPA1-201ENST00000254719 ZNF526Q8TF50 670 aaPredicted RBP10.02□□□□□ -0.8
RPA1-201ENST00000254719 ATP8B4Q8TF62 1192 aa10.02□□□□□ -0.8
RPA1-201ENST00000254719 SCFD2Q8WU76 684 aa10.02□□□□□ -0.8
RPA1-201ENST00000254719 CAPZA3Q96KX2 299 aa10.02□□□□□ -0.8
RPA1-201ENST00000254719 NOX5Q96PH1 765 aa10.02□□□□□ -0.8
RPA1-201ENST00000254719 ACP6Q9NPH0 428 aa10.02□□□□□ -0.8
RPA1-201ENST00000254719 RIPK3Q9Y572 518 aa10.02□□□□□ -0.8
RPA1-201ENST00000254719 ANO9A1A5B4 782 aa10.02□□□□□ -0.81
RPA1-201ENST00000254719 ZNF233A6NK53 670 aa10.02□□□□□ -0.81
RPA1-201ENST00000254719 NFIBO00712 420 aa10.02□□□□□ -0.81
RPA1-201ENST00000254719 ALDH1B1P30837 517 aa10.02□□□□□ -0.81
RPA1-201ENST00000254719 UBXN2AP68543 259 aa10.02□□□□□ -0.81
RPA1-201ENST00000254719 CYP4A11Q02928 519 aa10.02□□□□□ -0.81
RPA1-201ENST00000254719 EDRF1Q3B7T1 1238 aa10.02□□□□□ -0.81
RPA1-201ENST00000254719 SPDYE2Q495Y8 402 aa10.02□□□□□ -0.81
RPA1-201ENST00000254719 FAM26FQ5R3K3 315 aa10.02□□□□□ -0.81
RPA1-201ENST00000254719 CCDC174Q6PII3 467 aa10.02□□□□□ -0.81
RPA1-201ENST00000254719 LRRC31Q6UY01 552 aa10.02□□□□□ -0.81
RPA1-201ENST00000254719 TMEM179Q6ZVK1 233 aa10.02□□□□□ -0.81
RPA1-201ENST00000254719 TAS1R3Q7RTX0 852 aa10.02□□□□□ -0.81
RPA1-201ENST00000254719 MICALL1Q8N3F8 863 aa10.02□□□□□ -0.81
RPA1-201ENST00000254719 POLR3CQ9BUI4 534 aaPredicted RBP10.02□□□□□ -0.81
RPA1-201ENST00000254719 NLRC4Q9NPP4 1024 aa10.02□□□□□ -0.81
RPA1-201ENST00000254719 OLFML3Q9NRN5 406 aa10.02□□□□□ -0.81
RPA1-201ENST00000254719 PNMA2Q9UL42 364 aa10.02□□□□□ -0.81
RPA1-201ENST00000254719 ADGRA3Q8IWK6 1321 aa10.02□□□□□ -0.81
RPA1-201ENST00000254719 TARSL2A2RTX5 802 aaKnown RBP10.02□□□□□ -0.81
RPA1-201ENST00000254719 BTNL10A8MVZ5 291 aa10.02□□□□□ -0.81
RPA1-201ENST00000254719 FKBP3Q00688 224 aaKnown RBP10.02□□□□□ -0.81
RPA1-201ENST00000254719 CTTNQ14247 550 aaKnown RBP10.02□□□□□ -0.81
RPA1-201ENST00000254719 SLC18A3Q16572 532 aa10.02□□□□□ -0.81
RPA1-201ENST00000254719 NFIL3Q16649 462 aa10.02□□□□□ -0.81
RPA1-201ENST00000254719 KIAA0753Q2KHM9 967 aa10.02□□□□□ -0.81
RPA1-201ENST00000254719 SRLQ86TD4 932 aa10.02□□□□□ -0.81
RPA1-201ENST00000254719 SUPT20HQ8NEM7 779 aa10.02□□□□□ -0.81
RPA1-201ENST00000254719 FLAD1Q8NFF5 587 aa10.02□□□□□ -0.81
RPA1-201ENST00000254719 AGBL1Q96MI9 1066 aa10.02□□□□□ -0.81
RPA1-201ENST00000254719 HERPUD2Q9BSE4 406 aa10.02□□□□□ -0.81
RPA1-201ENST00000254719 CEP72Q9P209 647 aa10.02□□□□□ -0.81
RPA1-201ENST00000254719 MCM3APO60318 1980 aa10.02□□□□□ -0.81
RPA1-201ENST00000254719 BUB1O43683 1085 aa10.01□□□□□ -0.81
RPA1-201ENST00000254719 ICA1Q05084 483 aa10.01□□□□□ -0.81
RPA1-201ENST00000254719 ZNF720Q7Z2F6 126 aa10.01□□□□□ -0.81
RPA1-201ENST00000254719 GPBP1Q86WP2 473 aa10.01□□□□□ -0.81
RPA1-201ENST00000254719 MYOCDQ8IZQ8 938 aa10.01□□□□□ -0.81
RPA1-201ENST00000254719 ZNF622Q969S3 477 aaKnown RBP eCLIP10.01□□□□□ -0.814e-10■□□□□ 8.7
RPA1-201ENST00000254719 SH2D3AQ9BRG2 576 aa10.01□□□□□ -0.81
RPA1-201ENST00000254719 WDR11Q9BZH6 1224 aa10.01□□□□□ -0.81
RPA1-201ENST00000254719 PLCB1Q9NQ66 1216 aa10.01□□□□□ -0.81
RPA1-201ENST00000254719 TBX3O15119 743 aa10.01□□□□□ -0.81
RPA1-201ENST00000254719 DDX3YO15523 660 aaKnown RBP10.01□□□□□ -0.81
RPA1-201ENST00000254719 RPS6KA5O75582 802 aa10.01□□□□□ -0.81
RPA1-201ENST00000254719 CCNE2O96020 404 aa10.01□□□□□ -0.81
RPA1-201ENST00000254719 MAGEA1P43355 309 aa10.01□□□□□ -0.81
RPA1-201ENST00000254719 ANKS1BQ7Z6G8 1248 aa10.01□□□□□ -0.81
RPA1-201ENST00000254719 BHMT2Q9H2M3 363 aa10.01□□□□□ -0.81
RPA1-201ENST00000254719 ERVK-5Q9HDB9 667 aa10.01□□□□□ -0.81
RPA1-201ENST00000254719 OSGEPQ9NPF4 335 aa10.01□□□□□ -0.81
RPA1-201ENST00000254719 PDLIM7Q9NR12 457 aa10.01□□□□□ -0.81
RPA1-201ENST00000254719 PSD3Q9NYI0 1048 aa10.01□□□□□ -0.81
RPA1-201ENST00000254719 C21orf2O43822 256 aa10.01□□□□□ -0.81
RPA1-201ENST00000254719 DKC1O60832 514 aaKnown RBP eCLIP10.01□□□□□ -0.814e-8■■□□□ 11.8
RPA1-201ENST00000254719 GGCXP38435 758 aa10.01□□□□□ -0.81
RPA1-201ENST00000254719 CAP2P40123 477 aa10.01□□□□□ -0.81
RPA1-201ENST00000254719 SEPT7Q16181 437 aaKnown RBP10.01□□□□□ -0.81
RPA1-201ENST00000254719 KNOP1Q1ED39 458 aaKnown RBP10.01□□□□□ -0.81
RPA1-201ENST00000254719 SYDE2Q5VT97 1194 aa10.01□□□□□ -0.81
RPA1-201ENST00000254719 FBXW10Q5XX13 1052 aa10.01□□□□□ -0.81
RPA1-201ENST00000254719 AADACL2Q6P093 401 aa10.01□□□□□ -0.81
RPA1-201ENST00000254719 FAM133AQ8N9E0 248 aa10.01□□□□□ -0.81
RPA1-201ENST00000254719 ARL8AQ96BM9 186 aa10.01□□□□□ -0.81
RPA1-201ENST00000254719 ARHGEF26Q96DR7 871 aa10.01□□□□□ -0.81
RPA1-201ENST00000254719 ARHGEF10LQ9HCE6 1279 aa10.01□□□□□ -0.81
RPA1-201ENST00000254719 ZNF70Q9UC06 446 aaPredicted RBP10.01□□□□□ -0.81
RPA1-201ENST00000254719 KCNG1Q9UIX4 513 aa10.01□□□□□ -0.81
RPA1-201ENST00000254719 NAGPAQ9UK23 515 aa10.01□□□□□ -0.81
RPA1-201ENST00000254719 FBXL5Q9UKA1 691 aa10.01□□□□□ -0.81
RPA1-201ENST00000254719 ENTPD3O75355 529 aa10.01□□□□□ -0.81
RPA1-201ENST00000254719 PALMO75781 387 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms