RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 RGS16O15492 202 aaPredicted RBP4.5□□□□□ -1.69
UBE4A-201ENST00000252108 MED24O75448 989 aa4.5□□□□□ -1.69
UBE4A-201ENST00000252108 PSMD10O75832 226 aa4.5□□□□□ -1.69
UBE4A-201ENST00000252108 HADHBP55084 474 aaKnown RBP4.5□□□□□ -1.69
UBE4A-201ENST00000252108 PPP2R2AP63151 447 aa4.5□□□□□ -1.69
UBE4A-201ENST00000252108 CRYMQ14894 314 aa4.5□□□□□ -1.69
UBE4A-201ENST00000252108 TTBK2Q6IQ55 1244 aa4.5□□□□□ -1.69
UBE4A-201ENST00000252108 PDXDC1Q6P996 788 aa4.5□□□□□ -1.69
UBE4A-201ENST00000252108 POTEEQ6S8J3 1075 aa4.5□□□□□ -1.69
UBE4A-201ENST00000252108 HS2ST1Q7LGA3 356 aa4.5□□□□□ -1.69
UBE4A-201ENST00000252108 DAW1Q8N136 415 aa4.5□□□□□ -1.69
UBE4A-201ENST00000252108 ARHGAP24Q8N264 748 aa4.5□□□□□ -1.69
UBE4A-201ENST00000252108 CUL5Q93034 780 aa4.5□□□□□ -1.69
UBE4A-201ENST00000252108 GRAMD1AQ96CP6 724 aa4.5□□□□□ -1.69
UBE4A-201ENST00000252108 FAM81BQ96LP2 452 aa4.5□□□□□ -1.69
UBE4A-201ENST00000252108 EPB41L4BQ9H329 900 aa4.5□□□□□ -1.69
UBE4A-201ENST00000252108 NOC2LQ9Y3T9 749 aaKnown RBP4.5□□□□□ -1.69
UBE4A-201ENST00000252108 PHF20L1A8MW92 1017 aa4.5□□□□□ -1.69
UBE4A-201ENST00000252108 MIF4GDA9UHW6 222 aaKnown RBP4.5□□□□□ -1.69
UBE4A-201ENST00000252108 ENC1O14682 589 aa4.5□□□□□ -1.69
UBE4A-201ENST00000252108 ATP2A1O14983 1001 aa4.5□□□□□ -1.69
UBE4A-201ENST00000252108 ZPR1O75312 459 aa4.5□□□□□ -1.69
UBE4A-201ENST00000252108 LMNAP02545 664 aaKnown RBP4.5□□□□□ -1.69
UBE4A-201ENST00000252108 GOLGA8HP0CJ92 632 aa4.5□□□□□ -1.69
UBE4A-201ENST00000252108 KRT13P13646 458 aa4.5□□□□□ -1.69
UBE4A-201ENST00000252108 ADCY7P51828 1080 aa4.5□□□□□ -1.69
UBE4A-201ENST00000252108 GIT2Q14161 759 aa4.5□□□□□ -1.69
UBE4A-201ENST00000252108 TNIP1Q15025 636 aa4.5□□□□□ -1.69
UBE4A-201ENST00000252108 FAM182BQ5T319 152 aa4.5□□□□□ -1.69
UBE4A-201ENST00000252108 STYK1Q6J9G0 422 aa4.5□□□□□ -1.69
UBE4A-201ENST00000252108 SLFN12Q8IYM2 578 aa4.5□□□□□ -1.69
UBE4A-201ENST00000252108 RASGEF1CQ8N431 466 aa4.5□□□□□ -1.69
UBE4A-201ENST00000252108 BANK1Q8NDB2 785 aa4.5□□□□□ -1.69
UBE4A-201ENST00000252108 GRK7Q8WTQ7 553 aa4.5□□□□□ -1.69
UBE4A-201ENST00000252108 LARP4BQ92615 738 aaKnown RBP4.5□□□□□ -1.69
UBE4A-201ENST00000252108 WDR18Q9BV38 432 aa4.5□□□□□ -1.69
UBE4A-201ENST00000252108 GDF3Q9NR23 364 aa4.5□□□□□ -1.69
UBE4A-201ENST00000252108 SERPINA10Q9UK55 444 aa4.5□□□□□ -1.69
UBE4A-201ENST00000252108 SMCO2A6NFE2 343 aa4.5□□□□□ -1.69
UBE4A-201ENST00000252108 KRIT1O00522 736 aa4.5□□□□□ -1.69
UBE4A-201ENST00000252108 TBC1D12O60347 775 aa4.5□□□□□ -1.69
UBE4A-201ENST00000252108 HNRNPCL1O60812 293 aaKnown RBP4.5□□□□□ -1.69
UBE4A-201ENST00000252108 HNRNPH1P31943 449 aaKnown RBP4.5□□□□□ -1.69
UBE4A-201ENST00000252108 LSP1P33241 339 aa4.5□□□□□ -1.69
UBE4A-201ENST00000252108 STAT1P42224 750 aa4.5□□□□□ -1.69
UBE4A-201ENST00000252108 DHX34Q14147 1143 aaKnown RBP4.5□□□□□ -1.69
UBE4A-201ENST00000252108 EPHA7Q15375 998 aa4.5□□□□□ -1.69
UBE4A-201ENST00000252108 ENOX2Q16206 610 aaKnown RBP4.5□□□□□ -1.69
UBE4A-201ENST00000252108 FAM26FQ5R3K3 315 aa4.5□□□□□ -1.69
UBE4A-201ENST00000252108 ZNF473Q8WTR7 871 aaKnown RBP4.5□□□□□ -1.69
UBE4A-201ENST00000252108 HOOK2Q96ED9 719 aa4.5□□□□□ -1.69
UBE4A-201ENST00000252108 LSM14BQ9BX40 385 aaKnown RBP4.5□□□□□ -1.69
UBE4A-201ENST00000252108 ISCUQ9H1K1 167 aa4.5□□□□□ -1.69
UBE4A-201ENST00000252108 RANBP17Q9H2T7 1088 aaKnown RBP4.5□□□□□ -1.69
UBE4A-201ENST00000252108 VCPKMTQ9H867 229 aa4.5□□□□□ -1.69
UBE4A-201ENST00000252108 OLFML3Q9NRN5 406 aa4.5□□□□□ -1.69
UBE4A-201ENST00000252108 CPSF2Q9P2I0 782 aaKnown RBP4.5□□□□□ -1.69
UBE4A-201ENST00000252108 RGS17Q9UGC6 210 aaPredicted RBP4.5□□□□□ -1.69
UBE4A-201ENST00000252108 TTC7AQ9ULT0 858 aaPredicted RBP4.5□□□□□ -1.69
UBE4A-201ENST00000252108 GTPBP10A4D1E9 387 aaKnown RBP4.49□□□□□ -1.69
UBE4A-201ENST00000252108 GAP43P17677 238 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 HPDP32754 393 aaPredicted RBP4.49□□□□□ -1.69
UBE4A-201ENST00000252108 BYSLQ13895 437 aaKnown RBP4.49□□□□□ -1.69
UBE4A-201ENST00000252108 NAA25Q14CX7 972 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 PTGISQ16647 500 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 LETM2Q2VYF4 491 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 INTS8Q75QN2 995 aaKnown RBP4.49□□□□□ -1.69
UBE4A-201ENST00000252108 PARP9Q8IXQ6 854 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 SNX29Q8TEQ0 813 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 DCAF4Q8WV16 495 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 TEPSINQ96N21 525 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 SELENOSQ9BQE4 189 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 SUGCTQ9HAC7 445 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 NOP53Q9NZM5 478 aaKnown RBP4.49□□□□□ -1.69
UBE4A-201ENST00000252108 GGA1Q9UJY5 639 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 CCNT1O60563 726 aaKnown RBP4.49□□□□□ -1.69
UBE4A-201ENST00000252108 MUTP22033 750 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 PDE6CP51160 858 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 GYS2P54840 703 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 NPEPPSP55786 919 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 SLC8A3P57103 927 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 CAV1Q03135 178 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 IFT88Q13099 833 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 SPP2Q13103 211 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 NR1H3Q13133 447 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 CBLBQ13191 982 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 PPP2R5CQ13362 524 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 ITIH4Q14624 930 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 STRIP1Q5VSL9 837 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 SLC5A5Q92911 643 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 PDLIM7Q9NR12 457 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 FAM207AQ9NSI2 230 aaPredicted RBP4.49□□□□□ -1.69
UBE4A-201ENST00000252108 DONSONQ9NYP3 566 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.49□□□□□ -1.69
UBE4A-201ENST00000252108 POTEMA6NI47 508 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 KCNK3O14649 394 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 PPEF1O14829 653 aaPredicted RBP4.49□□□□□ -1.69
UBE4A-201ENST00000252108 TTLL1O95922 423 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 ITGBL1O95965 494 aaPredicted RBP4.49□□□□□ -1.69
UBE4A-201ENST00000252108 BCRP11274 1271 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms