RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 PDXDC2PQ6P474 469 aa11.7□□□□□ -0.54
VPS50-201ENST00000251739 ADGRD2Q7Z7M1 963 aa11.7□□□□□ -0.54
VPS50-201ENST00000251739 FAM228AQ86W67 206 aa11.7□□□□□ -0.54
VPS50-201ENST00000251739 SMAP1Q8IYB5 467 aaPredicted RBP11.7□□□□□ -0.54
VPS50-201ENST00000251739 KLHL23Q8NBE8 558 aa11.7□□□□□ -0.54
VPS50-201ENST00000251739 BRF1Q92994 677 aa11.7□□□□□ -0.54
VPS50-201ENST00000251739 RGS18Q9NS28 235 aa11.7□□□□□ -0.54
VPS50-201ENST00000251739 SNX14Q9Y5W7 946 aa11.7□□□□□ -0.54
VPS50-201ENST00000251739 ZNF862O60290 1169 aa11.69□□□□□ -0.54
VPS50-201ENST00000251739 GPR32O75388 356 aa11.69□□□□□ -0.54
VPS50-201ENST00000251739 RPS6KA5O75582 802 aa11.69□□□□□ -0.54
VPS50-201ENST00000251739 GLP2RO95838 553 aa11.69□□□□□ -0.54
VPS50-201ENST00000251739 IFNAR1P17181 557 aa11.69□□□□□ -0.54
VPS50-201ENST00000251739 FAM189BP81408 668 aa11.69□□□□□ -0.54
VPS50-201ENST00000251739 MIS18BP1Q6P0N0 1132 aa11.69□□□□□ -0.54
VPS50-201ENST00000251739 Q6ZUG5 572 aa11.69□□□□□ -0.54
VPS50-201ENST00000251739 SLC24A5Q71RS6 500 aa11.69□□□□□ -0.54
VPS50-201ENST00000251739 EFHBQ8N7U6 833 aa11.69□□□□□ -0.54
VPS50-201ENST00000251739 TTC13Q8NBP0 860 aa11.69□□□□□ -0.54
VPS50-201ENST00000251739 SMRP1Q8NCR6 262 aa11.69□□□□□ -0.54
VPS50-201ENST00000251739 CCDC12Q8WUD4 166 aaPredicted RBP11.69□□□□□ -0.54
VPS50-201ENST00000251739 POF1BQ8WVV4 589 aa11.69□□□□□ -0.54
VPS50-201ENST00000251739 JAKMIP1Q96N16 626 aaKnown RBP11.69□□□□□ -0.54
VPS50-201ENST00000251739 ADAM2Q99965 735 aa11.69□□□□□ -0.54
VPS50-201ENST00000251739 ZNF577Q9BSK1 485 aa11.69□□□□□ -0.54
VPS50-201ENST00000251739 RNF26Q9BY78 433 aaPredicted RBP11.69□□□□□ -0.54
VPS50-201ENST00000251739 C6orf50Q9HD87 102 aa11.69□□□□□ -0.54
VPS50-201ENST00000251739 C1orf112Q9NSG2 853 aa11.69□□□□□ -0.54
VPS50-201ENST00000251739 CLEC1BQ9P126 229 aa11.69□□□□□ -0.54
VPS50-201ENST00000251739 HCSTQ9UBK5 93 aa11.69□□□□□ -0.54
VPS50-201ENST00000251739 ST3GAL5Q9UNP4 418 aa11.69□□□□□ -0.54
VPS50-201ENST00000251739 PCDHA10Q9Y5I2 948 aa11.69□□□□□ -0.54
VPS50-201ENST00000251739 KMT2EQ8IZD2 1858 aa11.68□□□□□ -0.54
VPS50-201ENST00000251739 RPS6KB1P23443 525 aa11.68□□□□□ -0.54
VPS50-201ENST00000251739 CRYBB1P53674 252 aaPredicted RBP11.68□□□□□ -0.54
VPS50-201ENST00000251739 UBE3AQ05086 875 aa11.68□□□□□ -0.54
VPS50-201ENST00000251739 NFX1Q12986 1120 aaKnown RBP11.68□□□□□ -0.54
VPS50-201ENST00000251739 COASYQ13057 564 aa11.68□□□□□ -0.54
VPS50-201ENST00000251739 CLUL1Q15846 466 aa11.68□□□□□ -0.54
VPS50-201ENST00000251739 KIZQ2M2Z5 673 aa11.68□□□□□ -0.54
VPS50-201ENST00000251739 HERC4Q5GLZ8 1057 aaPredicted RBP11.68□□□□□ -0.54
VPS50-201ENST00000251739 BLOC1S2Q6QNY1 142 aa11.68□□□□□ -0.54
VPS50-201ENST00000251739 EP400NLQ6ZTU2 488 aa11.68□□□□□ -0.54
VPS50-201ENST00000251739 RASGRP4Q8TDF6 673 aa11.68□□□□□ -0.54
VPS50-201ENST00000251739 PHKBQ93100 1093 aa11.68□□□□□ -0.54
VPS50-201ENST00000251739 UIMC1Q96RL1 719 aa11.68□□□□□ -0.54
VPS50-201ENST00000251739 OSMRQ99650 979 aa11.68□□□□□ -0.54
VPS50-201ENST00000251739 ELAC1Q9H777 363 aaKnown RBP11.68□□□□□ -0.54
VPS50-201ENST00000251739 RNF19AQ9NV58 838 aa11.68□□□□□ -0.54
VPS50-201ENST00000251739 TMEM161AQ9NX61 479 aa11.68□□□□□ -0.54
VPS50-201ENST00000251739 CD207Q9UJ71 328 aa11.68□□□□□ -0.54
VPS50-201ENST00000251739 GINS2Q9Y248 185 aa11.68□□□□□ -0.54
VPS50-201ENST00000251739 VPS9D1Q9Y2B5 631 aa11.68□□□□□ -0.54
VPS50-201ENST00000251739 PCDHGC5Q9Y5F6 944 aa11.68□□□□□ -0.54
VPS50-201ENST00000251739 ARID2Q68CP9 1835 aa11.67□□□□□ -0.54
VPS50-201ENST00000251739 DENND3A2RUS2 1198 aa11.67□□□□□ -0.54
VPS50-201ENST00000251739 WDR64B1ANS9 1081 aa11.67□□□□□ -0.54
VPS50-201ENST00000251739 FSCN2O14926 492 aa11.67□□□□□ -0.54
VPS50-201ENST00000251739 GPR182O15218 404 aa11.67□□□□□ -0.54
VPS50-201ENST00000251739 MSH4O15457 936 aa11.67□□□□□ -0.54
VPS50-201ENST00000251739 VTNP04004 478 aa11.67□□□□□ -0.54
VPS50-201ENST00000251739 PSAPP07602 524 aa11.67□□□□□ -0.54
VPS50-201ENST00000251739 GNA11P29992 359 aa11.67□□□□□ -0.54
VPS50-201ENST00000251739 CLCN3P51790 818 aa11.67□□□□□ -0.54
VPS50-201ENST00000251739 PROX2Q3B8N5 592 aa11.67□□□□□ -0.54
VPS50-201ENST00000251739 PRR16Q569H4 304 aa11.67□□□□□ -0.54
VPS50-201ENST00000251739 ODR4Q5SWX8 454 aa11.67□□□□□ -0.54
VPS50-201ENST00000251739 FAM102BQ5T8I3 360 aa11.67□□□□□ -0.54
VPS50-201ENST00000251739 B3GNT9Q6UX72 402 aa11.67□□□□□ -0.54
VPS50-201ENST00000251739 CCDC148Q8NFR7 591 aa11.67□□□□□ -0.54
VPS50-201ENST00000251739 SLC5A5Q92911 643 aa11.67□□□□□ -0.54
VPS50-201ENST00000251739 PPP2R3CQ969Q6 453 aa11.67□□□□□ -0.54
VPS50-201ENST00000251739 FAM167AQ96KS9 214 aa11.67□□□□□ -0.54
VPS50-201ENST00000251739 POP1Q99575 1024 aaKnown RBP11.67□□□□□ -0.54
VPS50-201ENST00000251739 ADAMTS10Q9H324 1103 aa11.67□□□□□ -0.54
VPS50-201ENST00000251739 CWH43Q9H720 699 aa11.67□□□□□ -0.54
VPS50-201ENST00000251739 LRFN2Q9ULH4 789 aa11.67□□□□□ -0.54
VPS50-201ENST00000251739 TBKBP1A7MCY6 615 aa11.66□□□□□ -0.54
VPS50-201ENST00000251739 MAGEB2O15479 319 aa11.66□□□□□ -0.54
VPS50-201ENST00000251739 CSPG5O95196 566 aa11.66□□□□□ -0.54
VPS50-201ENST00000251739 PDIA3P30101 505 aaKnown RBP11.66□□□□□ -0.54
VPS50-201ENST00000251739 NRIP1P48552 1158 aa11.66□□□□□ -0.54
VPS50-201ENST00000251739 NDUFV1P49821 464 aa11.66□□□□□ -0.54
VPS50-201ENST00000251739 FGD1P98174 961 aa11.66□□□□□ -0.54
VPS50-201ENST00000251739 KCNC3Q14003 757 aa11.66□□□□□ -0.54
VPS50-201ENST00000251739 CBX2Q14781 532 aaPredicted RBP11.66□□□□□ -0.54
VPS50-201ENST00000251739 NPY5RQ15761 445 aa11.66□□□□□ -0.54
VPS50-201ENST00000251739 UGCGQ16739 394 aa11.66□□□□□ -0.54
VPS50-201ENST00000251739 ADGRD1Q6QNK2 874 aa11.66□□□□□ -0.54
VPS50-201ENST00000251739 PADI6Q6TGC4 694 aa11.66□□□□□ -0.54
VPS50-201ENST00000251739 COLGALT1Q8NBJ5 622 aa11.66□□□□□ -0.54
VPS50-201ENST00000251739 VN1R2Q8NFZ6 395 aa11.66□□□□□ -0.54
VPS50-201ENST00000251739 BICD2Q8TD16 824 aa11.66□□□□□ -0.54
VPS50-201ENST00000251739 RIT2Q99578 217 aa11.66□□□□□ -0.54
VPS50-201ENST00000251739 IGFLR1Q9H665 355 aa11.66□□□□□ -0.54
VPS50-201ENST00000251739 SH3GLB2Q9NR46 395 aa11.66□□□□□ -0.54
VPS50-201ENST00000251739 TLR9Q9NR96 1032 aa11.66□□□□□ -0.54
VPS50-201ENST00000251739 VPS54Q9P1Q0 977 aa11.66□□□□□ -0.54
VPS50-201ENST00000251739 GABBR1Q9UBS5 961 aa11.66□□□□□ -0.54
VPS50-201ENST00000251739 NAP1L2Q9ULW6 460 aaPredicted RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms