RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 MAGEA9P43362 315 aa11.02□□□□□ -0.65
COPB1-201ENST00000249923 DLG4P78352 724 aa11.02□□□□□ -0.65
COPB1-201ENST00000249923 GUCY1A3Q02108 690 aa11.02□□□□□ -0.65
COPB1-201ENST00000249923 SLC15A2Q16348 729 aa11.02□□□□□ -0.65
COPB1-201ENST00000249923 SAMD1Q6SPF0 538 aaPredicted RBP11.02□□□□□ -0.65
COPB1-201ENST00000249923 TPH2Q8IWU9 490 aa11.02□□□□□ -0.65
COPB1-201ENST00000249923 LMO3Q8TAP4 145 aa11.02□□□□□ -0.65
COPB1-201ENST00000249923 MASTLQ96GX5 879 aa11.02□□□□□ -0.65
COPB1-201ENST00000249923 STRA6Q9BX79 667 aa11.02□□□□□ -0.65
COPB1-201ENST00000249923 CELF4Q9BZC1 486 aaKnown RBP11.02□□□□□ -0.65
COPB1-201ENST00000249923 GLIS2Q9BZE0 524 aaPredicted RBP11.02□□□□□ -0.65
COPB1-201ENST00000249923 TRIM31Q9BZY9 425 aa11.02□□□□□ -0.65
COPB1-201ENST00000249923 PPP1R9AQ9ULJ8 1098 aa11.02□□□□□ -0.65
COPB1-201ENST00000249923 ZNF131P52739 623 aa11.01□□□□□ -0.65
COPB1-201ENST00000249923 ACTN3Q08043 901 aaPredicted RBP11.01□□□□□ -0.65
COPB1-201ENST00000249923 CHADLQ6NUI6 762 aa11.01□□□□□ -0.65
COPB1-201ENST00000249923 HES6Q96HZ4 224 aa11.01□□□□□ -0.65
COPB1-201ENST00000249923 DMAC2Q9NW81 257 aa11.01□□□□□ -0.65
COPB1-201ENST00000249923 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.01□□□□□ -0.65
COPB1-201ENST00000249923 GOLGA6L7A0A1B0GV03 622 aa11.01□□□□□ -0.65
COPB1-201ENST00000249923 CES2O00748 559 aa11.01□□□□□ -0.65
COPB1-201ENST00000249923 SART1O43290 800 aaKnown RBP11.01□□□□□ -0.65
COPB1-201ENST00000249923 CALUO43852 315 aaPredicted RBP11.01□□□□□ -0.65
COPB1-201ENST00000249923 HSF2BPO75031 334 aa11.01□□□□□ -0.65
COPB1-201ENST00000249923 CHRNA5P30532 468 aa11.01□□□□□ -0.65
COPB1-201ENST00000249923 COPB2P35606 906 aa11.01□□□□□ -0.65
COPB1-201ENST00000249923 HSPA9P38646 679 aaKnown RBP11.01□□□□□ -0.65
COPB1-201ENST00000249923 GALCP54803 685 aa11.01□□□□□ -0.65
COPB1-201ENST00000249923 IKQ13123 557 aaPredicted RBP11.01□□□□□ -0.65
COPB1-201ENST00000249923 PPP2R5CQ13362 524 aa11.01□□□□□ -0.65
COPB1-201ENST00000249923 RPS6KA1Q15418 735 aa11.01□□□□□ -0.65
COPB1-201ENST00000249923 UBAP2Q5T6F2 1119 aaKnown RBP11.01□□□□□ -0.65
COPB1-201ENST00000249923 PHLDB3Q6NSJ2 640 aa11.01□□□□□ -0.65
COPB1-201ENST00000249923 ZNF720Q7Z2F6 126 aa11.01□□□□□ -0.65
COPB1-201ENST00000249923 KIRREL3Q8IZU9 778 aa11.01□□□□□ -0.65
COPB1-201ENST00000249923 RASGEF1CQ8N431 466 aa11.01□□□□□ -0.65
COPB1-201ENST00000249923 ERMNQ8TAM6 284 aa11.01□□□□□ -0.65
COPB1-201ENST00000249923 SLC5A5Q92911 643 aa11.01□□□□□ -0.65
COPB1-201ENST00000249923 AMACRQ9UHK6 382 aa11.01□□□□□ -0.65
COPB1-201ENST00000249923 SERPINA10Q9UK55 444 aa11.01□□□□□ -0.65
COPB1-201ENST00000249923 CEP104O60308 925 aa11.01□□□□□ -0.65
COPB1-201ENST00000249923 BUB1BO60566 1050 aaPredicted RBP11.01□□□□□ -0.65
COPB1-201ENST00000249923 CFBP00751 764 aa11.01□□□□□ -0.65
COPB1-201ENST00000249923 RPSAP08865 295 aaKnown RBP11.01□□□□□ -0.65
COPB1-201ENST00000249923 MAP2K2P36507 400 aa11.01□□□□□ -0.65
COPB1-201ENST00000249923 HSD17B3P37058 310 aa11.01□□□□□ -0.65
COPB1-201ENST00000249923 GBP6Q6ZN66 633 aa11.01□□□□□ -0.65
COPB1-201ENST00000249923 C7orf43Q8WVR3 580 aa11.01□□□□□ -0.65
COPB1-201ENST00000249923 ZNF622Q969S3 477 aaKnown RBP eCLIP11.01□□□□□ -0.656e-21■□□□□ 8.9
COPB1-201ENST00000249923 CSRNP1Q96S65 589 aa11.01□□□□□ -0.65
COPB1-201ENST00000249923 ISCUQ9H1K1 167 aa11.01□□□□□ -0.65
COPB1-201ENST00000249923 UNC45AQ9H3U1 944 aa11.01□□□□□ -0.65
COPB1-201ENST00000249923 GOPCQ9HD26 462 aa11.01□□□□□ -0.65
COPB1-201ENST00000249923 ERVK-5Q9HDB9 667 aa11.01□□□□□ -0.65
COPB1-201ENST00000249923 FAM169AQ9Y6X4 670 aa11.01□□□□□ -0.65
COPB1-201ENST00000249923 TMCO5BA8MYB1 307 aa11□□□□□ -0.65
COPB1-201ENST00000249923 DCDC2CA8MYV0 355 aa11□□□□□ -0.65
COPB1-201ENST00000249923 DDX3YO15523 660 aaKnown RBP11□□□□□ -0.65
COPB1-201ENST00000249923 NPM3O75607 178 aaKnown RBP11□□□□□ -0.65
COPB1-201ENST00000249923 PPP1R37O75864 691 aa11□□□□□ -0.65
COPB1-201ENST00000249923 ALDH1B1P30837 517 aa11□□□□□ -0.65
COPB1-201ENST00000249923 NOP2P46087 812 aaKnown RBP11□□□□□ -0.65
COPB1-201ENST00000249923 FMO5P49326 533 aa11□□□□□ -0.65
COPB1-201ENST00000249923 PAK2Q13177 524 aa11□□□□□ -0.65
COPB1-201ENST00000249923 ITGB3BPQ13352 177 aaPredicted RBP11□□□□□ -0.65
COPB1-201ENST00000249923 AADACL2Q6P093 401 aa11□□□□□ -0.65
COPB1-201ENST00000249923 CD302Q8IX05 232 aa11□□□□□ -0.65
COPB1-201ENST00000249923 ATP8B4Q8TF62 1192 aa11□□□□□ -0.65
COPB1-201ENST00000249923 U2AF1L4Q8WU68 220 aaKnown RBP11□□□□□ -0.65
COPB1-201ENST00000249923 TAF1DQ9H5J8 278 aaPredicted RBP11□□□□□ -0.65
COPB1-201ENST00000249923 AGPAT3Q9NRZ7 376 aa11□□□□□ -0.65
COPB1-201ENST00000249923 TLDC2A0PJX2 215 aa11□□□□□ -0.65
COPB1-201ENST00000249923 GTPBP10A4D1E9 387 aaKnown RBP11□□□□□ -0.65
COPB1-201ENST00000249923 GOLGA6L10A6NI86 522 aa11□□□□□ -0.65
COPB1-201ENST00000249923 FOSP01100 380 aaPredicted RBP11□□□□□ -0.65
COPB1-201ENST00000249923 PPATQ06203 517 aa11□□□□□ -0.65
COPB1-201ENST00000249923 SPP2Q13103 211 aa11□□□□□ -0.65
COPB1-201ENST00000249923 PRPF4BQ13523 1007 aaKnown RBP11□□□□□ -0.65
COPB1-201ENST00000249923 C1orf220Q5T0J3 134 aa11□□□□□ -0.65
COPB1-201ENST00000249923 EMC10Q5UCC4 262 aa11□□□□□ -0.65
COPB1-201ENST00000249923 LRCH2Q5VUJ6 765 aa11□□□□□ -0.65
COPB1-201ENST00000249923 CCDC174Q6PII3 467 aa11□□□□□ -0.65
COPB1-201ENST00000249923 FAM186BQ8IYM0 893 aa11□□□□□ -0.65
COPB1-201ENST00000249923 ZDHHC14Q8IZN3 488 aa11□□□□□ -0.65
COPB1-201ENST00000249923 MYCT1Q8N699 235 aa11□□□□□ -0.65
COPB1-201ENST00000249923 PLEKHO2Q8TD55 490 aa11□□□□□ -0.65
COPB1-201ENST00000249923 FBXO28Q9NVF7 368 aa11□□□□□ -0.65
COPB1-201ENST00000249923 COL20A1Q9P218 1284 aa11□□□□□ -0.65
COPB1-201ENST00000249923 TRPC5Q9UL62 973 aaPredicted RBP11□□□□□ -0.65
COPB1-201ENST00000249923 PLAAQ9Y263 795 aa11□□□□□ -0.65
COPB1-201ENST00000249923 CNTNAP1P78357 1384 aa11□□□□□ -0.65
COPB1-201ENST00000249923 PSME4Q14997 1843 aa11□□□□□ -0.65
COPB1-201ENST00000249923 MYO1FO00160 1098 aa11□□□□□ -0.65
COPB1-201ENST00000249923 HDLBPQ00341 1268 aaKnown RBP11□□□□□ -0.65
COPB1-201ENST00000249923 IFT88Q13099 833 aa11□□□□□ -0.65
COPB1-201ENST00000249923 DRAP1Q14919 205 aaPredicted RBP11□□□□□ -0.65
COPB1-201ENST00000249923 MEX3CQ5U5Q3 659 aaKnown RBP11□□□□□ -0.65
COPB1-201ENST00000249923 TADA2BQ86TJ2 420 aa11□□□□□ -0.65
COPB1-201ENST00000249923 KAT2BQ92831 832 aa11□□□□□ -0.65
COPB1-201ENST00000249923 SH2D3AQ9BRG2 576 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms