RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 TECP42680 631 aa14.26□□□□□ -0.13
VPREB3-201ENST00000248948 NPEPPSP55786 919 aa14.26□□□□□ -0.13
VPREB3-201ENST00000248948 PTGDRQ13258 359 aa14.26□□□□□ -0.13
VPREB3-201ENST00000248948 DRP2Q13474 957 aa14.26□□□□□ -0.13
VPREB3-201ENST00000248948 XKR9Q5GH70 373 aa14.26□□□□□ -0.13
VPREB3-201ENST00000248948 NPAS4Q8IUM7 802 aa14.26□□□□□ -0.13
VPREB3-201ENST00000248948 C4orf32Q8N8J7 132 aa14.26□□□□□ -0.13
VPREB3-201ENST00000248948 TCP11Q8WWU5 503 aa14.26□□□□□ -0.13
VPREB3-201ENST00000248948 NLRP7Q8WX94 980 aa14.26□□□□□ -0.13
VPREB3-201ENST00000248948 PSPC1Q8WXF1 523 aaKnown RBP14.26□□□□□ -0.13
VPREB3-201ENST00000248948 SAMD11Q96NU1 681 aa14.26□□□□□ -0.13
VPREB3-201ENST00000248948 PPP1R16BQ96T49 567 aa14.26□□□□□ -0.13
VPREB3-201ENST00000248948 MTRQ99707 1265 aa14.26□□□□□ -0.13
VPREB3-201ENST00000248948 SH2D3AQ9BRG2 576 aa14.26□□□□□ -0.13
VPREB3-201ENST00000248948 TMX1Q9H3N1 280 aa14.26□□□□□ -0.13
VPREB3-201ENST00000248948 CDHR5Q9HBB8 845 aa14.26□□□□□ -0.13
VPREB3-201ENST00000248948 ST3GAL5Q9UNP4 418 aa14.26□□□□□ -0.13
VPREB3-201ENST00000248948 LINC01553A4QN01 128 aa14.25□□□□□ -0.13
VPREB3-201ENST00000248948 ENPP3O14638 875 aa14.25□□□□□ -0.13
VPREB3-201ENST00000248948 DGAT1O75907 488 aa14.25□□□□□ -0.13
VPREB3-201ENST00000248948 ARHGEF15O94989 841 aa14.25□□□□□ -0.13
VPREB3-201ENST00000248948 SPATA31C1P0DKV0 1188 aa14.25□□□□□ -0.13
VPREB3-201ENST00000248948 XRCC6P12956 609 aaKnown RBP eCLIP14.25□□□□□ -0.13
VPREB3-201ENST00000248948 SFPQP23246 707 aaKnown RBP eCLIP14.25□□□□□ -0.13
VPREB3-201ENST00000248948 RPA1P27694 616 aa14.25□□□□□ -0.13
VPREB3-201ENST00000248948 SARSP49591 514 aaKnown RBP14.25□□□□□ -0.13
VPREB3-201ENST00000248948 RARRES1P49788 294 aa14.25□□□□□ -0.13
VPREB3-201ENST00000248948 ATP2C1P98194 919 aaPredicted RBP14.25□□□□□ -0.13
VPREB3-201ENST00000248948 NFX1Q12986 1120 aaKnown RBP14.25□□□□□ -0.13
VPREB3-201ENST00000248948 FAM117BQ6P1L5 589 aa14.25□□□□□ -0.13
VPREB3-201ENST00000248948 IGSF22Q8N9C0 903 aa14.25□□□□□ -0.13
VPREB3-201ENST00000248948 GCOM2Q9BZD3 368 aaPredicted RBP14.25□□□□□ -0.13
VPREB3-201ENST00000248948 INO80BQ9C086 356 aaPredicted RBP14.25□□□□□ -0.13
VPREB3-201ENST00000248948 PRDM12Q9H4Q4 367 aa14.25□□□□□ -0.13
VPREB3-201ENST00000248948 ATP6V0A4Q9HBG4 840 aa14.25□□□□□ -0.13
VPREB3-201ENST00000248948 RGS18Q9NS28 235 aa14.25□□□□□ -0.13
VPREB3-201ENST00000248948 SUCLA2Q9P2R7 463 aaPredicted RBP14.25□□□□□ -0.13
VPREB3-201ENST00000248948 DBR1Q9UK59 544 aaKnown RBP14.25□□□□□ -0.13
VPREB3-201ENST00000248948 COL4A3BPQ9Y5P4 624 aa14.25□□□□□ -0.13
VPREB3-201ENST00000248948 MYH11P35749 1972 aa14.25□□□□□ -0.13
VPREB3-201ENST00000248948 DENND3A2RUS2 1198 aa14.24□□□□□ -0.13
VPREB3-201ENST00000248948 MED24O75448 989 aa14.24□□□□□ -0.13
VPREB3-201ENST00000248948 BMP15O95972 392 aa14.24□□□□□ -0.13
VPREB3-201ENST00000248948 STAG3L1P0CL83 205 aa14.24□□□□□ -0.13
VPREB3-201ENST00000248948 ERVK-21P61565 698 aa14.24□□□□□ -0.13
VPREB3-201ENST00000248948 PDIA5Q14554 519 aa14.24□□□□□ -0.13
VPREB3-201ENST00000248948 SLC24A5Q71RS6 500 aa14.24□□□□□ -0.13
VPREB3-201ENST00000248948 CATSPER3Q86XQ3 398 aa14.24□□□□□ -0.13
VPREB3-201ENST00000248948 RHPN2Q8IUC4 686 aa14.24□□□□□ -0.13
VPREB3-201ENST00000248948 HSCBQ8IWL3 235 aa14.24□□□□□ -0.13
VPREB3-201ENST00000248948 CRIPAKQ8N1N5 446 aa14.24□□□□□ -0.13
VPREB3-201ENST00000248948 ZNF579Q8NAF0 562 aaKnown RBP14.24□□□□□ -0.13
VPREB3-201ENST00000248948 NLRP4Q96MN2 994 aa14.24□□□□□ -0.13
VPREB3-201ENST00000248948 TGS1Q96RS0 853 aaKnown RBP14.24□□□□□ -0.13
VPREB3-201ENST00000248948 RWDD3Q9Y3V2 267 aa14.24□□□□□ -0.13
VPREB3-201ENST00000248948 VPS37CA5D8V6 355 aaPredicted RBP14.23□□□□□ -0.13
VPREB3-201ENST00000248948 RBAK-RBAKDNI3L0D1 243 aa14.23□□□□□ -0.13
VPREB3-201ENST00000248948 ASAP2O43150 1006 aa14.23□□□□□ -0.13
VPREB3-201ENST00000248948 MGEA5O60502 916 aa14.23□□□□□ -0.13
VPREB3-201ENST00000248948 DGKIO75912 1065 aa14.23□□□□□ -0.13
VPREB3-201ENST00000248948 UPP2O95045 317 aa14.23□□□□□ -0.13
VPREB3-201ENST00000248948 DSC3Q14574 896 aa14.23□□□□□ -0.13
VPREB3-201ENST00000248948 MXD4Q14582 209 aaPredicted RBP14.23□□□□□ -0.13
VPREB3-201ENST00000248948 ARL6IP4Q66PJ3 421 aaKnown RBP14.23□□□□□ -0.13
VPREB3-201ENST00000248948 POTEGQ6S5H5 508 aa14.23□□□□□ -0.13
VPREB3-201ENST00000248948 DTHD1Q6ZMT9 781 aa14.23□□□□□ -0.13
VPREB3-201ENST00000248948 CMTR2Q8IYT2 770 aaKnown RBP14.23□□□□□ -0.13
VPREB3-201ENST00000248948 MAFAQ8NHW3 353 aaPredicted RBP14.23□□□□□ -0.13
VPREB3-201ENST00000248948 ZNF689Q96CS4 500 aaPredicted RBP14.23□□□□□ -0.13
VPREB3-201ENST00000248948 NACC1Q96RE7 527 aa14.23□□□□□ -0.13
VPREB3-201ENST00000248948 ELAC1Q9H777 363 aaKnown RBP14.23□□□□□ -0.13
VPREB3-201ENST00000248948 XPNPEP1Q9NQW7 623 aa14.23□□□□□ -0.13
VPREB3-201ENST00000248948 LRWD1Q9UFC0 647 aa14.23□□□□□ -0.13
VPREB3-201ENST00000248948 PLXNA4Q9HCM2 1894 aa14.23□□□□□ -0.13
VPREB3-201ENST00000248948 A0A087WZ62 844 aa14.22□□□□□ -0.13
VPREB3-201ENST00000248948 C9IYK1 514 aa14.22□□□□□ -0.13
VPREB3-201ENST00000248948 POU3F3P20264 500 aaPredicted RBP14.22□□□□□ -0.13
VPREB3-201ENST00000248948 PCBP1Q15365 356 aaKnown RBP eCLIP14.22□□□□□ -0.13
VPREB3-201ENST00000248948 SRGAP1Q7Z6B7 1085 aa14.22□□□□□ -0.13
VPREB3-201ENST00000248948 RTN4RL1Q86UN2 441 aaPredicted RBP14.22□□□□□ -0.13
VPREB3-201ENST00000248948 FERMT3Q86UX7 667 aa14.22□□□□□ -0.13
VPREB3-201ENST00000248948 MCPH1Q8NEM0 835 aa14.22□□□□□ -0.13
VPREB3-201ENST00000248948 SNX29Q8TEQ0 813 aa14.22□□□□□ -0.13
VPREB3-201ENST00000248948 ARNTL2Q8WYA1 636 aa14.22□□□□□ -0.13
VPREB3-201ENST00000248948 ADAM2Q99965 735 aa14.22□□□□□ -0.13
VPREB3-201ENST00000248948 FDXACB1Q9BRP7 624 aaPredicted RBP14.22□□□□□ -0.13
VPREB3-201ENST00000248948 CHST12Q9NRB3 414 aa14.22□□□□□ -0.13
VPREB3-201ENST00000248948 TMEM161AQ9NX61 479 aa14.22□□□□□ -0.13
VPREB3-201ENST00000248948 DACT1Q9NYF0 836 aa14.22□□□□□ -0.13
VPREB3-201ENST00000248948 PRRC2BQ5JSZ5 2229 aaKnown RBP14.21□□□□□ -0.13
VPREB3-201ENST00000248948 EPOPA6NHQ4 379 aa14.21□□□□□ -0.13
VPREB3-201ENST00000248948 ZBTB39O15060 712 aa14.21□□□□□ -0.13
VPREB3-201ENST00000248948 ZSCAN20P17040 1043 aaPredicted RBP14.21□□□□□ -0.13
VPREB3-201ENST00000248948 SYT1P21579 422 aa14.21□□□□□ -0.13
VPREB3-201ENST00000248948 CCT6AP40227 531 aaKnown RBP14.21□□□□□ -0.13
VPREB3-201ENST00000248948 PHKA2P46019 1235 aa14.21□□□□□ -0.13
VPREB3-201ENST00000248948 POU5F1BQ06416 359 aa14.21□□□□□ -0.13
VPREB3-201ENST00000248948 LAMTOR4Q0VGL1 99 aa14.21□□□□□ -0.13
VPREB3-201ENST00000248948 TFDP1Q14186 410 aa14.21□□□□□ -0.13
VPREB3-201ENST00000248948 ADGRE1Q14246 886 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms