RNA–Protein interactions for RNA: ENST00000244815.9

LRRFIP1-201, Transcript of LRR binding FLII interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LRRFIP1, Length 4,370 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-201ENST00000244815 CCNYQ8ND76 341 aa17.12■□□□□ 0.33
LRRFIP1-201ENST00000244815 ZNF564Q8TBZ8 553 aaPredicted RBP17.12■□□□□ 0.33
LRRFIP1-201ENST00000244815 FUT8Q9BYC5 575 aa17.12■□□□□ 0.33
LRRFIP1-201ENST00000244815 RBM12Q9NTZ6 932 aaKnown RBP17.12■□□□□ 0.33
LRRFIP1-201ENST00000244815 SEL1LQ9UBV2 794 aa17.12■□□□□ 0.33
LRRFIP1-201ENST00000244815 H0Y3Z8 333 aa17.12■□□□□ 0.33
LRRFIP1-201ENST00000244815 PPM1FP49593 454 aaPredicted RBP17.12■□□□□ 0.33
LRRFIP1-201ENST00000244815 LRRC14Q15048 493 aa17.12■□□□□ 0.33
LRRFIP1-201ENST00000244815 ZBTB33Q86T24 672 aa17.12■□□□□ 0.33
LRRFIP1-201ENST00000244815 ERICH1Q86X53 443 aa17.12■□□□□ 0.33
LRRFIP1-201ENST00000244815 CCDC117Q8IWD4 279 aaPredicted RBP17.12■□□□□ 0.33
LRRFIP1-201ENST00000244815 CEP120Q8N960 986 aa17.12■□□□□ 0.33
LRRFIP1-201ENST00000244815 C11orf70Q9BRQ4 267 aa17.12■□□□□ 0.33
LRRFIP1-201ENST00000244815 TUBB6Q9BUF5 446 aa17.12■□□□□ 0.33
LRRFIP1-201ENST00000244815 IFT122Q9HBG6 1241 aa17.12■□□□□ 0.33
LRRFIP1-201ENST00000244815 TTC7AQ9ULT0 858 aaPredicted RBP17.12■□□□□ 0.33
LRRFIP1-201ENST00000244815 TSPOAP1O95153 1857 aa17.12■□□□□ 0.33
LRRFIP1-201ENST00000244815 TJP3O95049 919 aa17.12■□□□□ 0.33
LRRFIP1-201ENST00000244815 USP11P51784 963 aa17.12■□□□□ 0.33
LRRFIP1-201ENST00000244815 VAMP7P51809 220 aa17.12■□□□□ 0.33
LRRFIP1-201ENST00000244815 TFDP1Q14186 410 aa17.12■□□□□ 0.33
LRRFIP1-201ENST00000244815 MIS18BP1Q6P0N0 1132 aa17.12■□□□□ 0.33
LRRFIP1-201ENST00000244815 FRMD5Q7Z6J6 570 aa17.12■□□□□ 0.33
LRRFIP1-201ENST00000244815 ELOA2Q8IYF1 753 aaPredicted RBP17.12■□□□□ 0.33
LRRFIP1-201ENST00000244815 DLC1Q96QB1 1528 aa17.11■□□□□ 0.33
LRRFIP1-201ENST00000244815 A0A0G2JND7 137 aa17.11■□□□□ 0.33
LRRFIP1-201ENST00000244815 MDH1P40925 334 aaKnown RBP17.11■□□□□ 0.33
LRRFIP1-201ENST00000244815 IRAK1P51617 712 aa17.11■□□□□ 0.33
LRRFIP1-201ENST00000244815 AP1ARQ63HQ0 302 aa17.11■□□□□ 0.33
LRRFIP1-201ENST00000244815 SESTD1Q86VW0 696 aa17.11■□□□□ 0.33
LRRFIP1-201ENST00000244815 C7orf31Q8N865 590 aa17.11■□□□□ 0.33
LRRFIP1-201ENST00000244815 RNF25Q96BH1 459 aaPredicted RBP17.11■□□□□ 0.33
LRRFIP1-201ENST00000244815 INTS2Q9H0H0 1204 aaKnown RBP17.11■□□□□ 0.33
LRRFIP1-201ENST00000244815 SMYD2Q9NRG4 433 aa17.11■□□□□ 0.33
LRRFIP1-201ENST00000244815 PPP1R9AQ9ULJ8 1098 aa17.11■□□□□ 0.33
LRRFIP1-201ENST00000244815 IPO5O00410 1097 aaKnown RBP17.11■□□□□ 0.33
LRRFIP1-201ENST00000244815 SLC16A4O15374 487 aa17.11■□□□□ 0.33
LRRFIP1-201ENST00000244815 CRKP46108 304 aa17.11■□□□□ 0.33
LRRFIP1-201ENST00000244815 CCT8L2Q96SF2 557 aa17.11■□□□□ 0.33
LRRFIP1-201ENST00000244815 EIF3HO15372 352 aaKnown RBP eCLIP17.11■□□□□ 0.33
LRRFIP1-201ENST00000244815 TOM1L1O75674 476 aa17.11■□□□□ 0.33
LRRFIP1-201ENST00000244815 TROAPQ12815 778 aa17.11■□□□□ 0.33
LRRFIP1-201ENST00000244815 CCDC93Q567U6 631 aa17.11■□□□□ 0.33
LRRFIP1-201ENST00000244815 OR6B2Q6IFH4 312 aa17.11■□□□□ 0.33
LRRFIP1-201ENST00000244815 SCARA5Q6ZMJ2 495 aa17.11■□□□□ 0.33
LRRFIP1-201ENST00000244815 PCGF5Q86SE9 256 aa17.11■□□□□ 0.33
LRRFIP1-201ENST00000244815 NUP85Q9BW27 656 aa17.11■□□□□ 0.33
LRRFIP1-201ENST00000244815 PSD3Q9NYI0 1048 aa17.11■□□□□ 0.33
LRRFIP1-201ENST00000244815 DCTN3O75935 186 aa17.1■□□□□ 0.33
LRRFIP1-201ENST00000244815 GSTA1P08263 222 aa17.1■□□□□ 0.33
LRRFIP1-201ENST00000244815 GSTA2P09210 222 aa17.1■□□□□ 0.33
LRRFIP1-201ENST00000244815 ST3GAL1Q11201 340 aa17.1■□□□□ 0.33
LRRFIP1-201ENST00000244815 PASD1Q8IV76 773 aa17.1■□□□□ 0.33
LRRFIP1-201ENST00000244815 MSTO1Q9BUK6 570 aa17.1■□□□□ 0.33
LRRFIP1-201ENST00000244815 TDRD3Q9H7E2 651 aaKnown RBP17.1■□□□□ 0.33
LRRFIP1-201ENST00000244815 PDXKO00764 312 aa17.1■□□□□ 0.33
LRRFIP1-201ENST00000244815 SOX5P35711 763 aa17.1■□□□□ 0.33
LRRFIP1-201ENST00000244815 ECE1P42892 770 aa17.1■□□□□ 0.33
LRRFIP1-201ENST00000244815 CARSP49589 748 aaKnown RBP17.1■□□□□ 0.33
LRRFIP1-201ENST00000244815 COG7P83436 770 aa17.1■□□□□ 0.33
LRRFIP1-201ENST00000244815 GABPAQ06546 454 aa17.1■□□□□ 0.33
LRRFIP1-201ENST00000244815 EPM2AIP1Q7L775 607 aaPredicted RBP17.1■□□□□ 0.33
LRRFIP1-201ENST00000244815 DNAAF3Q8N9W5 541 aa17.1■□□□□ 0.33
LRRFIP1-201ENST00000244815 MAML1Q92585 1016 aa17.1■□□□□ 0.33
LRRFIP1-201ENST00000244815 TTC17Q96AE7 1141 aa17.1■□□□□ 0.33
LRRFIP1-201ENST00000244815 TRIM4Q9C037 500 aa17.1■□□□□ 0.33
LRRFIP1-201ENST00000244815 NACA2Q9H009 215 aa17.1■□□□□ 0.33
LRRFIP1-201ENST00000244815 INTUQ9ULD6 942 aa17.1■□□□□ 0.33
LRRFIP1-201ENST00000244815 FHOD1Q9Y613 1164 aa17.1■□□□□ 0.33
LRRFIP1-201ENST00000244815 MED7O43513 233 aa17.1■□□□□ 0.33
LRRFIP1-201ENST00000244815 PSAPP07602 524 aa17.1■□□□□ 0.33
LRRFIP1-201ENST00000244815 ABCD1P33897 745 aa17.1■□□□□ 0.33
LRRFIP1-201ENST00000244815 NCAPHQ15003 741 aa17.1■□□□□ 0.33
LRRFIP1-201ENST00000244815 SBK1Q52WX2 424 aa17.1■□□□□ 0.33
LRRFIP1-201ENST00000244815 RAPH1Q70E73 1250 aa17.1■□□□□ 0.33
LRRFIP1-201ENST00000244815 RNF169Q8NCN4 708 aa17.1■□□□□ 0.33
LRRFIP1-201ENST00000244815 PNKPQ96T60 521 aa17.1■□□□□ 0.33
LRRFIP1-201ENST00000244815 ZNF277Q9NRM2 450 aaPredicted RBP17.1■□□□□ 0.33
LRRFIP1-201ENST00000244815 RGL1Q9NZL6 768 aa17.1■□□□□ 0.33
LRRFIP1-201ENST00000244815 SCOCQ9UIL1 159 aa17.1■□□□□ 0.33
LRRFIP1-201ENST00000244815 PRPSAP2O60256 369 aa17.1■□□□□ 0.33
LRRFIP1-201ENST00000244815 UCHL3P15374 230 aa17.1■□□□□ 0.33
LRRFIP1-201ENST00000244815 RFC1P35251 1148 aaPredicted RBP17.1■□□□□ 0.33
LRRFIP1-201ENST00000244815 KLK7P49862 253 aa17.1■□□□□ 0.33
LRRFIP1-201ENST00000244815 SH3BGRP55822 239 aaPredicted RBP17.1■□□□□ 0.33
LRRFIP1-201ENST00000244815 MMEL1Q495T6 779 aa17.1■□□□□ 0.33
LRRFIP1-201ENST00000244815 HACE1Q8IYU2 909 aa17.1■□□□□ 0.33
LRRFIP1-201ENST00000244815 TMEM35BQ8NCS4 154 aa17.1■□□□□ 0.33
LRRFIP1-201ENST00000244815 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.1■□□□□ 0.331e-6■■■■■ 56.2
LRRFIP1-201ENST00000244815 RUBCNQ92622 972 aa17.1■□□□□ 0.33
LRRFIP1-201ENST00000244815 ZWILCHQ9H900 591 aa17.1■□□□□ 0.33
LRRFIP1-201ENST00000244815 CEP152O94986 1710 aa17.09■□□□□ 0.33
LRRFIP1-201ENST00000244815 TTI1O43156 1089 aa17.09■□□□□ 0.33
LRRFIP1-201ENST00000244815 ASNSP08243 561 aa17.09■□□□□ 0.33
LRRFIP1-201ENST00000244815 GALCP54803 685 aa17.09■□□□□ 0.33
LRRFIP1-201ENST00000244815 MTMR1Q13613 665 aa17.09■□□□□ 0.33
LRRFIP1-201ENST00000244815 ZNF34Q8IZ26 560 aa17.09■□□□□ 0.33
LRRFIP1-201ENST00000244815 RBM41Q96IZ5 413 aaKnown RBP17.09■□□□□ 0.33
LRRFIP1-201ENST00000244815 TRIM55Q9BYV6 548 aa17.09■□□□□ 0.33
LRRFIP1-201ENST00000244815 ZNF335Q9H4Z2 1342 aaPredicted RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms