RNA–Protein interactions for RNA: ENST00000243776.10

CHPF-201, Transcript of chondroitin polymerizing factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF, Length 3,013 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF-201ENST00000243776 OTUD6AQ7L8S5 288 aa20.16■□□□□ 0.82
CHPF-201ENST00000243776 MYCT1Q8N699 235 aa20.16■□□□□ 0.82
CHPF-201ENST00000243776 TCP11Q8WWU5 503 aa20.16■□□□□ 0.82
CHPF-201ENST00000243776 CTNNBL1Q8WYA6 563 aaPredicted RBP20.16■□□□□ 0.82
CHPF-201ENST00000243776 PRMT1Q99873 361 aaKnown RBP20.16■□□□□ 0.82
CHPF-201ENST00000243776 KCNMB3Q9NPA1 279 aa20.16■□□□□ 0.82
CHPF-201ENST00000243776 COG5Q9UP83 839 aa20.16■□□□□ 0.82
CHPF-201ENST00000243776 EP400Q96L91 3159 aa20.16■□□□□ 0.82
CHPF-201ENST00000243776 BTNL10A8MVZ5 291 aa20.15■□□□□ 0.82
CHPF-201ENST00000243776 hCG_1984214I3L0E3 225 aa20.15■□□□□ 0.82
CHPF-201ENST00000243776 PPP1R12BO60237 982 aaPredicted RBP20.15■□□□□ 0.82
CHPF-201ENST00000243776 UBXN2AP68543 259 aa20.15■□□□□ 0.82
CHPF-201ENST00000243776 CBWD6Q4V339 395 aa20.15■□□□□ 0.82
CHPF-201ENST00000243776 CBWD3Q5JTY5 395 aa20.15■□□□□ 0.82
CHPF-201ENST00000243776 CBWD5Q5RIA9 395 aa20.15■□□□□ 0.82
CHPF-201ENST00000243776 SLFN11Q7Z7L1 901 aa20.15■□□□□ 0.82
CHPF-201ENST00000243776 PNMA8AQ86V59 439 aaPredicted RBP20.15■□□□□ 0.82
CHPF-201ENST00000243776 TAX1BP1Q86VP1 789 aa20.15■□□□□ 0.82
CHPF-201ENST00000243776 LRRC34Q8IZ02 419 aa20.15■□□□□ 0.82
CHPF-201ENST00000243776 ZNF713Q8N859 430 aaPredicted RBP20.15■□□□□ 0.82
CHPF-201ENST00000243776 C1orf131Q8NDD1 294 aaKnown RBP20.15■□□□□ 0.82
CHPF-201ENST00000243776 EPS8L3Q8TE67 593 aaKnown RBP20.15■□□□□ 0.82
CHPF-201ENST00000243776 KRT35Q92764 455 aa20.15■□□□□ 0.82
CHPF-201ENST00000243776 CHMP6Q96FZ7 201 aa20.15■□□□□ 0.82
CHPF-201ENST00000243776 SLITRK6Q9H5Y7 841 aa20.15■□□□□ 0.82
CHPF-201ENST00000243776 USP40Q9NVE5 1235 aa20.15■□□□□ 0.82
CHPF-201ENST00000243776 TRAF3IP3Q9Y228 551 aa20.15■□□□□ 0.82
CHPF-201ENST00000243776 ATF5Q9Y2D1 282 aaPredicted RBP20.15■□□□□ 0.82
CHPF-201ENST00000243776 EML1O00423 815 aa20.15■□□□□ 0.82
CHPF-201ENST00000243776 JAM2P57087 298 aa20.15■□□□□ 0.82
CHPF-201ENST00000243776 RASGEF1CQ8N431 466 aa20.15■□□□□ 0.82
CHPF-201ENST00000243776 FAM212AQ96EL1 285 aa20.15■□□□□ 0.82
CHPF-201ENST00000243776 FAM114A2Q9NRY5 505 aa20.15■□□□□ 0.82
CHPF-201ENST00000243776 CCNL1Q9UK58 526 aaPredicted RBP20.15■□□□□ 0.82
CHPF-201ENST00000243776 ODF2LQ9ULJ1 636 aa20.15■□□□□ 0.82
CHPF-201ENST00000243776 DDX3YO15523 660 aaKnown RBP20.14■□□□□ 0.82
CHPF-201ENST00000243776 ATMINO43313 823 aaPredicted RBP20.14■□□□□ 0.82
CHPF-201ENST00000243776 CLTAP09496 248 aa20.14■□□□□ 0.82
CHPF-201ENST00000243776 PMS2P54278 862 aa20.14■□□□□ 0.82
CHPF-201ENST00000243776 NFIAQ12857 509 aa20.14■□□□□ 0.82
CHPF-201ENST00000243776 TBC1D10BQ4KMP7 808 aaPredicted RBP20.14■□□□□ 0.82
CHPF-201ENST00000243776 TPH2Q8IWU9 490 aa20.14■□□□□ 0.82
CHPF-201ENST00000243776 FAM186BQ8IYM0 893 aa20.14■□□□□ 0.82
CHPF-201ENST00000243776 SLC20A1Q8WUM9 679 aa20.14■□□□□ 0.82
CHPF-201ENST00000243776 CDCA7Q9BWT1 371 aaPredicted RBP20.14■□□□□ 0.82
CHPF-201ENST00000243776 EPB41L4BQ9H329 900 aa20.14■□□□□ 0.82
CHPF-201ENST00000243776 CES2O00748 559 aa20.14■□□□□ 0.81
CHPF-201ENST00000243776 GCFC2P16383 781 aaKnown RBP20.14■□□□□ 0.81
CHPF-201ENST00000243776 SCP2P22307 547 aa20.14■□□□□ 0.81
CHPF-201ENST00000243776 SHMT1P34896 483 aa20.14■□□□□ 0.81
CHPF-201ENST00000243776 PRKCIP41743 596 aa20.14■□□□□ 0.81
CHPF-201ENST00000243776 KCNJ1P48048 391 aa20.14■□□□□ 0.81
CHPF-201ENST00000243776 POU5F1Q01860 360 aaKnown RBP20.14■□□□□ 0.81
CHPF-201ENST00000243776 TBC1D1Q86TI0 1168 aaPredicted RBP20.14■□□□□ 0.81
CHPF-201ENST00000243776 SYCE1Q8N0S2 351 aa20.14■□□□□ 0.81
CHPF-201ENST00000243776 ELMO3Q96BJ8 720 aa20.14■□□□□ 0.81
CHPF-201ENST00000243776 ACP6Q9NPH0 428 aa20.14■□□□□ 0.81
CHPF-201ENST00000243776 DNAJC17Q9NVM6 304 aaKnown RBP20.14■□□□□ 0.81
CHPF-201ENST00000243776 PCDHAC2Q9Y5I4 1007 aa20.14■□□□□ 0.81
CHPF-201ENST00000243776 TGFB1I1O43294 461 aa20.13■□□□□ 0.81
CHPF-201ENST00000243776 PPP4R3CPQ6ZMV5 832 aa20.13■□□□□ 0.81
CHPF-201ENST00000243776 CCT6BQ92526 530 aa20.13■□□□□ 0.81
CHPF-201ENST00000243776 ERP44Q9BS26 406 aa20.13■□□□□ 0.81
CHPF-201ENST00000243776 PDXKO00764 312 aa20.13■□□□□ 0.81
CHPF-201ENST00000243776 TNFAIP3P21580 790 aa20.13■□□□□ 0.81
CHPF-201ENST00000243776 SOX5P35711 763 aa20.13■□□□□ 0.81
CHPF-201ENST00000243776 ADCY1Q08828 1119 aa20.13■□□□□ 0.81
CHPF-201ENST00000243776 SPIRE1Q08AE8 756 aa20.13■□□□□ 0.81
CHPF-201ENST00000243776 DENND2CQ68D51 928 aa20.13■□□□□ 0.81
CHPF-201ENST00000243776 MSL1Q68DK7 614 aa20.13■□□□□ 0.81
CHPF-201ENST00000243776 JAMLQ86YT9 394 aa20.13■□□□□ 0.81
CHPF-201ENST00000243776 SYT2Q8N9I0 419 aaPredicted RBP20.13■□□□□ 0.81
CHPF-201ENST00000243776 SGSM3Q96HU1 749 aa20.13■□□□□ 0.81
CHPF-201ENST00000243776 BTBD6Q96KE9 485 aa20.13■□□□□ 0.81
CHPF-201ENST00000243776 TYW1Q9NV66 732 aaKnown RBP20.13■□□□□ 0.81
CHPF-201ENST00000243776 TCRBV7S2A1N4TA0A589 114 aa20.13■□□□□ 0.81
CHPF-201ENST00000243776 MEIS2O14770 477 aa20.13■□□□□ 0.81
CHPF-201ENST00000243776 NF2P35240 595 aa20.13■□□□□ 0.81
CHPF-201ENST00000243776 ZNF76P36508 570 aa20.13■□□□□ 0.81
CHPF-201ENST00000243776 GABPAQ06546 454 aa20.13■□□□□ 0.81
CHPF-201ENST00000243776 POP1Q99575 1024 aaKnown RBP20.13■□□□□ 0.81
CHPF-201ENST00000243776 ACTR5Q9H9F9 607 aaPredicted RBP20.13■□□□□ 0.81
CHPF-201ENST00000243776 RGS16O15492 202 aaPredicted RBP20.12■□□□□ 0.81
CHPF-201ENST00000243776 TRIM37O94972 964 aa20.12■□□□□ 0.81
CHPF-201ENST00000243776 DOK7Q18PE1 504 aa20.12■□□□□ 0.81
CHPF-201ENST00000243776 ERMARDQ5T6L9 678 aa20.12■□□□□ 0.81
CHPF-201ENST00000243776 ZC3H3Q8IXZ2 948 aaKnown RBP20.12■□□□□ 0.81
CHPF-201ENST00000243776 CCDC197Q8NCU1 140 aa20.12■□□□□ 0.81
CHPF-201ENST00000243776 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.12■□□□□ 0.81
CHPF-201ENST00000243776 UBAP1LF5GYI3 381 aa20.12■□□□□ 0.81
CHPF-201ENST00000243776 FERP16591 822 aa20.12■□□□□ 0.81
CHPF-201ENST00000243776 RPL13P26373 211 aaKnown RBP20.12■□□□□ 0.81
CHPF-201ENST00000243776 ACCSLQ4AC99 568 aa20.12■□□□□ 0.81
CHPF-201ENST00000243776 FOXR2Q6PJQ5 311 aa20.12■□□□□ 0.81
CHPF-201ENST00000243776 EPM2AIP1Q7L775 607 aaPredicted RBP20.12■□□□□ 0.81
CHPF-201ENST00000243776 CTTNBP2NLQ9P2B4 639 aa20.12■□□□□ 0.81
CHPF-201ENST00000243776 ANKRD63C9JTQ0 380 aa20.11■□□□□ 0.81
CHPF-201ENST00000243776 PPFIA2O75334 1257 aa20.11■□□□□ 0.81
CHPF-201ENST00000243776 NOVP48745 357 aa20.11■□□□□ 0.81
CHPF-201ENST00000243776 MESDQ14696 234 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms