RNA–Protein interactions for RNA: ENST00000235958.4

HMGCL-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 5

Gene HMGCL, Length 1,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-201ENST00000235958 RPAINQ86UA6 219 aa11.28□□□□□ -0.6
HMGCL-201ENST00000235958 KSR1Q8IVT5 923 aa11.28□□□□□ -0.6
HMGCL-201ENST00000235958 DAW1Q8N136 415 aa11.28□□□□□ -0.6
HMGCL-201ENST00000235958 GPT2Q8TD30 523 aa11.28□□□□□ -0.6
HMGCL-201ENST00000235958 TCP11Q8WWU5 503 aa11.28□□□□□ -0.6
HMGCL-201ENST00000235958 DHX38Q92620 1227 aaKnown RBP11.28□□□□□ -0.6
HMGCL-201ENST00000235958 DNAJC19Q96DA6 116 aa11.28□□□□□ -0.6
HMGCL-201ENST00000235958 LRRC27Q9C0I9 530 aa11.28□□□□□ -0.6
HMGCL-201ENST00000235958 TNMDQ9H2S6 317 aa11.28□□□□□ -0.6
HMGCL-201ENST00000235958 MAGEF1Q9HAY2 307 aa11.28□□□□□ -0.6
HMGCL-201ENST00000235958 TMEM39AQ9NV64 488 aa11.28□□□□□ -0.6
HMGCL-201ENST00000235958 ARID2Q68CP9 1835 aa11.28□□□□□ -0.6
HMGCL-201ENST00000235958 RSPH10B2B2RC85 870 aa11.27□□□□□ -0.61
HMGCL-201ENST00000235958 ASAP2O43150 1006 aa11.27□□□□□ -0.61
HMGCL-201ENST00000235958 KINO60870 393 aaKnown RBP11.27□□□□□ -0.61
HMGCL-201ENST00000235958 VTNP04004 478 aa11.27□□□□□ -0.61
HMGCL-201ENST00000235958 RSPH10BP0C881 870 aa11.27□□□□□ -0.61
HMGCL-201ENST00000235958 SRGAP2CP0DJJ0 459 aa11.27□□□□□ -0.61
HMGCL-201ENST00000235958 CKBP12277 381 aa11.27□□□□□ -0.61
HMGCL-201ENST00000235958 NLRP11P59045 1033 aaKnown RBP11.27□□□□□ -0.61
HMGCL-201ENST00000235958 CDC42EP1Q00587 391 aa11.27□□□□□ -0.61
HMGCL-201ENST00000235958 CACNB1Q02641 598 aaPredicted RBP11.27□□□□□ -0.61
HMGCL-201ENST00000235958 TMEM62Q0P6H9 643 aa11.27□□□□□ -0.61
HMGCL-201ENST00000235958 LAMTOR4Q0VGL1 99 aa11.27□□□□□ -0.61
HMGCL-201ENST00000235958 MAPK7Q13164 816 aa11.27□□□□□ -0.61
HMGCL-201ENST00000235958 CUL4BQ13620 913 aa11.27□□□□□ -0.61
HMGCL-201ENST00000235958 MXD4Q14582 209 aaPredicted RBP11.27□□□□□ -0.61
HMGCL-201ENST00000235958 CNNM4Q6P4Q7 775 aa11.27□□□□□ -0.61
HMGCL-201ENST00000235958 RSPH3Q86UC2 560 aa11.27□□□□□ -0.61
HMGCL-201ENST00000235958 RHPN2Q8IUC4 686 aa11.27□□□□□ -0.61
HMGCL-201ENST00000235958 PSPC1Q8WXF1 523 aaKnown RBP11.27□□□□□ -0.61
HMGCL-201ENST00000235958 DPF3Q92784 378 aa11.27□□□□□ -0.61
HMGCL-201ENST00000235958 KIFAP3Q92845 792 aa11.27□□□□□ -0.61
HMGCL-201ENST00000235958 ZNF668Q96K58 619 aaPredicted RBP11.27□□□□□ -0.61
HMGCL-201ENST00000235958 MAP7D2Q96T17 732 aa11.27□□□□□ -0.61
HMGCL-201ENST00000235958 REEP2Q9BRK0 252 aa11.27□□□□□ -0.61
HMGCL-201ENST00000235958 HTATIP2Q9BUP3 242 aa11.27□□□□□ -0.61
HMGCL-201ENST00000235958 TIPINQ9BVW5 301 aa11.27□□□□□ -0.61
HMGCL-201ENST00000235958 TRIM9Q9C026 710 aa11.27□□□□□ -0.61
HMGCL-201ENST00000235958 BLZF1Q9H2G9 400 aa11.27□□□□□ -0.61
HMGCL-201ENST00000235958 CDHR5Q9HBB8 845 aa11.27□□□□□ -0.61
HMGCL-201ENST00000235958 AKT3Q9Y243 479 aa11.27□□□□□ -0.61
HMGCL-201ENST00000235958 TRIM43BA6NCK2 446 aa11.26□□□□□ -0.61
HMGCL-201ENST00000235958 GTPBP6O43824 516 aaPredicted RBP11.26□□□□□ -0.61
HMGCL-201ENST00000235958 GPR32O75388 356 aa11.26□□□□□ -0.61
HMGCL-201ENST00000235958 CHRNA1P02708 482 aa11.26□□□□□ -0.61
HMGCL-201ENST00000235958 RPLP2P05387 115 aaKnown RBP11.26□□□□□ -0.61
HMGCL-201ENST00000235958 CLTBP09497 229 aa11.26□□□□□ -0.61
HMGCL-201ENST00000235958 IDEP14735 1019 aa11.26□□□□□ -0.61
HMGCL-201ENST00000235958 GLRA2P23416 452 aa11.26□□□□□ -0.61
HMGCL-201ENST00000235958 BFSP2Q13515 415 aa11.26□□□□□ -0.61
HMGCL-201ENST00000235958 KIZQ2M2Z5 673 aa11.26□□□□□ -0.61
HMGCL-201ENST00000235958 ZNF618Q5T7W0 954 aa11.26□□□□□ -0.61
HMGCL-201ENST00000235958 ELOA2Q8IYF1 753 aaPredicted RBP11.26□□□□□ -0.61
HMGCL-201ENST00000235958 MYCT1Q8N699 235 aa11.26□□□□□ -0.61
HMGCL-201ENST00000235958 ASAP3Q8TDY4 903 aa11.26□□□□□ -0.61
HMGCL-201ENST00000235958 BSNDQ8WZ55 320 aa11.26□□□□□ -0.61
HMGCL-201ENST00000235958 TRIM43Q96BQ3 446 aaPredicted RBP11.26□□□□□ -0.61
HMGCL-201ENST00000235958 CCDC34Q96HJ3 373 aa11.26□□□□□ -0.61
HMGCL-201ENST00000235958 DRC1Q96MC2 740 aa11.26□□□□□ -0.61
HMGCL-201ENST00000235958 NTPCRQ9BSD7 190 aaKnown RBP11.26□□□□□ -0.61
HMGCL-201ENST00000235958 NOC4LQ9BVI4 516 aaKnown RBP11.26□□□□□ -0.61
HMGCL-201ENST00000235958 CELF4Q9BZC1 486 aaKnown RBP11.26□□□□□ -0.61
HMGCL-201ENST00000235958 POLR3FQ9H1D9 316 aaPredicted RBP11.26□□□□□ -0.61
HMGCL-201ENST00000235958 ADAMTS10Q9H324 1103 aa11.26□□□□□ -0.61
HMGCL-201ENST00000235958 ZHX3Q9H4I2 956 aa11.26□□□□□ -0.61
HMGCL-201ENST00000235958 PANK4Q9NVE7 773 aa11.26□□□□□ -0.61
HMGCL-201ENST00000235958 TBX21Q9UL17 535 aa11.26□□□□□ -0.61
HMGCL-201ENST00000235958 ODF2LQ9ULJ1 636 aa11.26□□□□□ -0.61
HMGCL-201ENST00000235958 COL4A3BPQ9Y5P4 624 aa11.26□□□□□ -0.61
HMGCL-201ENST00000235958 PVALEFA0A1B0GWK0 134 aa11.25□□□□□ -0.61
HMGCL-201ENST00000235958 KIAA0355O15063 1070 aa11.25□□□□□ -0.61
HMGCL-201ENST00000235958 EVI5O60447 810 aa11.25□□□□□ -0.61
HMGCL-201ENST00000235958 FAM13AO94988 1023 aa11.25□□□□□ -0.61
HMGCL-201ENST00000235958 MYL1P05976 194 aa11.25□□□□□ -0.61
HMGCL-201ENST00000235958 PRR29P0C7W0 189 aa11.25□□□□□ -0.61
HMGCL-201ENST00000235958 CYP2C18P33260 490 aa11.25□□□□□ -0.61
HMGCL-201ENST00000235958 RGS19P49795 217 aa11.25□□□□□ -0.61
HMGCL-201ENST00000235958 GPC3P51654 580 aa11.25□□□□□ -0.61
HMGCL-201ENST00000235958 ZNF131P52739 623 aa11.25□□□□□ -0.61
HMGCL-201ENST00000235958 PEX3P56589 373 aa11.25□□□□□ -0.61
HMGCL-201ENST00000235958 ASIC1P78348 528 aa11.25□□□□□ -0.61
HMGCL-201ENST00000235958 MRPS6P82932 125 aaKnown RBP11.25□□□□□ -0.61
HMGCL-201ENST00000235958 DPYDQ12882 1025 aa11.25□□□□□ -0.61
HMGCL-201ENST00000235958 PNOCQ13519 176 aa11.25□□□□□ -0.61
HMGCL-201ENST00000235958 POSTNQ15063 836 aa11.25□□□□□ -0.61
HMGCL-201ENST00000235958 NFKBIBQ15653 356 aa11.25□□□□□ -0.61
HMGCL-201ENST00000235958 CAMK4Q16566 473 aa11.25□□□□□ -0.61
HMGCL-201ENST00000235958 FAM26DQ5JW98 314 aa11.25□□□□□ -0.61
HMGCL-201ENST00000235958 ZNF710Q8N1W2 664 aa11.25□□□□□ -0.61
HMGCL-201ENST00000235958 RNF149Q8NC42 400 aa11.25□□□□□ -0.61
HMGCL-201ENST00000235958 CAGE1Q8TC20 777 aa11.25□□□□□ -0.61
HMGCL-201ENST00000235958 IFT74Q96LB3 600 aa11.25□□□□□ -0.61
HMGCL-201ENST00000235958 PPP1R16BQ96T49 567 aa11.25□□□□□ -0.61
HMGCL-201ENST00000235958 HIPK3Q9H422 1215 aa11.25□□□□□ -0.61
HMGCL-201ENST00000235958 C17orf75Q9HAS0 396 aa11.25□□□□□ -0.61
HMGCL-201ENST00000235958 PARVGQ9HBI0 331 aa11.25□□□□□ -0.61
HMGCL-201ENST00000235958 KCNG1Q9UIX4 513 aa11.25□□□□□ -0.61
HMGCL-201ENST00000235958 HOOK1Q9UJC3 728 aaKnown RBP11.25□□□□□ -0.61
HMGCL-201ENST00000235958 GINS2Q9Y248 185 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms