RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 TRIM32Q13049 653 aa20.48■□□□□ 0.87
SNX17-201ENST00000233575 DRP2Q13474 957 aa20.48■□□□□ 0.87
SNX17-201ENST00000233575 CD99L2Q8TCZ2 262 aa20.48■□□□□ 0.87
SNX17-201ENST00000233575 NOC3LQ8WTT2 800 aaKnown RBP20.48■□□□□ 0.87
SNX17-201ENST00000233575 SLC7A3Q8WY07 619 aa20.48■□□□□ 0.87
SNX17-201ENST00000233575 KIFAP3Q92845 792 aa20.48■□□□□ 0.87
SNX17-201ENST00000233575 VPS16Q9H269 839 aa20.48■□□□□ 0.87
SNX17-201ENST00000233575 ERAP1Q9NZ08 941 aa20.48■□□□□ 0.87
SNX17-201ENST00000233575 TRPC6Q9Y210 931 aa20.48■□□□□ 0.87
SNX17-201ENST00000233575 ADGRA3Q8IWK6 1321 aa20.48■□□□□ 0.87
SNX17-201ENST00000233575 CCDC169A6NNP5 214 aa20.48■□□□□ 0.87
SNX17-201ENST00000233575 PPFIA4O75335 1185 aa20.48■□□□□ 0.87
SNX17-201ENST00000233575 PTMAP06454 111 aaKnown RBP20.48■□□□□ 0.87
SNX17-201ENST00000233575 NCKAP1LP55160 1127 aa20.48■□□□□ 0.87
SNX17-201ENST00000233575 NR1I3Q14994 352 aa20.48■□□□□ 0.87
SNX17-201ENST00000233575 FOXR2Q6PJQ5 311 aa20.48■□□□□ 0.87
SNX17-201ENST00000233575 HAUS6Q7Z4H7 955 aa20.48■□□□□ 0.87
SNX17-201ENST00000233575 TLK2Q86UE8 772 aa20.48■□□□□ 0.87
SNX17-201ENST00000233575 TRAF3IP3Q9Y228 551 aa20.48■□□□□ 0.87
SNX17-201ENST00000233575 LRRC10BA6NIK2 292 aa20.47■□□□□ 0.87
SNX17-201ENST00000233575 CBFA2T2O43439 604 aa20.47■□□□□ 0.87
SNX17-201ENST00000233575 PRKCSHP14314 528 aaPredicted RBP20.47■□□□□ 0.87
SNX17-201ENST00000233575 SLC26A2P50443 739 aa20.47■□□□□ 0.87
SNX17-201ENST00000233575 COPB1P53618 953 aaKnown RBP20.47■□□□□ 0.87
SNX17-201ENST00000233575 FKBP3Q00688 224 aaKnown RBP20.47■□□□□ 0.87
SNX17-201ENST00000233575 SPAG1Q07617 926 aa20.47■□□□□ 0.87
SNX17-201ENST00000233575 DMP1Q13316 513 aaPredicted RBP20.47■□□□□ 0.87
SNX17-201ENST00000233575 IRF5Q13568 498 aa20.47■□□□□ 0.87
SNX17-201ENST00000233575 TYW1Q9NV66 732 aaKnown RBP20.47■□□□□ 0.87
SNX17-201ENST00000233575 PCDHB13Q9Y5F0 798 aa20.47■□□□□ 0.87
SNX17-201ENST00000233575 PDXKO00764 312 aa20.46■□□□□ 0.87
SNX17-201ENST00000233575 CLIC2O15247 247 aa20.46■□□□□ 0.87
SNX17-201ENST00000233575 MAFO75444 373 aaPredicted RBP20.46■□□□□ 0.87
SNX17-201ENST00000233575 MAPTP10636 758 aaKnown RBP20.46■□□□□ 0.87
SNX17-201ENST00000233575 HOXD8P13378 290 aaPredicted RBP20.46■□□□□ 0.87
SNX17-201ENST00000233575 EEF1GP26641 437 aaKnown RBP20.46■□□□□ 0.87
SNX17-201ENST00000233575 TMEM161BQ8NDZ6 487 aa20.46■□□□□ 0.87
SNX17-201ENST00000233575 ASAP3Q8TDY4 903 aa20.46■□□□□ 0.87
SNX17-201ENST00000233575 MAGEC2Q9UBF1 373 aaPredicted RBP20.46■□□□□ 0.87
SNX17-201ENST00000233575 THSD7BQ9C0I4 1608 aa20.46■□□□□ 0.87
SNX17-201ENST00000233575 NR2F2P24468 414 aa20.46■□□□□ 0.87
SNX17-201ENST00000233575 RFC5P40937 340 aa20.46■□□□□ 0.87
SNX17-201ENST00000233575 TBC1D8BQ0IIM8 1120 aa20.46■□□□□ 0.87
SNX17-201ENST00000233575 KIF22Q14807 665 aa20.46■□□□□ 0.87
SNX17-201ENST00000233575 TMC6Q7Z403 805 aa20.46■□□□□ 0.87
SNX17-201ENST00000233575 FILIP1Q7Z7B0 1213 aa20.46■□□□□ 0.87
SNX17-201ENST00000233575 ZC3H3Q8IXZ2 948 aaKnown RBP20.46■□□□□ 0.87
SNX17-201ENST00000233575 RTN4Q9NQC3 1192 aaKnown RBP20.46■□□□□ 0.87
SNX17-201ENST00000233575 KMT5AQ9NQR1 393 aa20.46■□□□□ 0.87
SNX17-201ENST00000233575 UBE4BO95155 1302 aa20.45■□□□□ 0.86
SNX17-201ENST00000233575 BRCA2P51587 3418 aa20.45■□□□□ 0.86
SNX17-201ENST00000233575 TISP43B9A030 160 aa20.45■□□□□ 0.86
SNX17-201ENST00000233575 H3BRB1 525 aa20.45■□□□□ 0.86
SNX17-201ENST00000233575 HBP1O60381 514 aa20.45■□□□□ 0.86
SNX17-201ENST00000233575 CYBAP13498 195 aa20.45■□□□□ 0.86
SNX17-201ENST00000233575 GLRA2P23416 452 aa20.45■□□□□ 0.86
SNX17-201ENST00000233575 ARL2P36404 184 aa20.45■□□□□ 0.86
SNX17-201ENST00000233575 GTF2BQ00403 316 aa20.45■□□□□ 0.86
SNX17-201ENST00000233575 MKRN4PQ13434 485 aaPredicted RBP20.45■□□□□ 0.86
SNX17-201ENST00000233575 ADAM9Q13443 819 aa20.45■□□□□ 0.86
SNX17-201ENST00000233575 DGKDQ16760 1214 aa20.45■□□□□ 0.86
SNX17-201ENST00000233575 EDRF1Q3B7T1 1238 aa20.45■□□□□ 0.86
SNX17-201ENST00000233575 PPP4R3CPQ6ZMV5 832 aa20.45■□□□□ 0.86
SNX17-201ENST00000233575 STXBP4Q6ZWJ1 553 aa20.45■□□□□ 0.86
SNX17-201ENST00000233575 LRRC71Q8N4P6 559 aa20.45■□□□□ 0.86
SNX17-201ENST00000233575 CTAGE1Q96RT6 745 aa20.45■□□□□ 0.86
SNX17-201ENST00000233575 TUT1Q9H6E5 874 aaKnown RBP20.45■□□□□ 0.86
SNX17-201ENST00000233575 FAM184BQ9ULE4 1060 aa20.45■□□□□ 0.86
SNX17-201ENST00000233575 CASP8AP2Q9UKL3 1982 aa20.45■□□□□ 0.86
SNX17-201ENST00000233575 A6NJR5 290 aa20.44■□□□□ 0.86
SNX17-201ENST00000233575 GPR25O00155 361 aa20.44■□□□□ 0.86
SNX17-201ENST00000233575 N4BP3O15049 544 aa20.44■□□□□ 0.86
SNX17-201ENST00000233575 INSRRP14616 1297 aa20.44■□□□□ 0.86
SNX17-201ENST00000233575 ELNP15502 786 aa20.44■□□□□ 0.86
SNX17-201ENST00000233575 RTP1P59025 263 aa20.44■□□□□ 0.86
SNX17-201ENST00000233575 IGBP1P78318 339 aa20.44■□□□□ 0.86
SNX17-201ENST00000233575 CCDC186Q7Z3E2 898 aa20.44■□□□□ 0.86
SNX17-201ENST00000233575 VSTM4Q8IW00 320 aa20.44■□□□□ 0.86
SNX17-201ENST00000233575 PPP1R13LQ8WUF5 828 aa20.44■□□□□ 0.86
SNX17-201ENST00000233575 SPIRE2Q8WWL2 714 aa20.44■□□□□ 0.86
SNX17-201ENST00000233575 TRIM44Q96DX7 344 aaPredicted RBP20.44■□□□□ 0.86
SNX17-201ENST00000233575 ZNF830Q96NB3 372 aaPredicted RBP20.44■□□□□ 0.86
SNX17-201ENST00000233575 NTPCRQ9BSD7 190 aaKnown RBP20.44■□□□□ 0.86
SNX17-201ENST00000233575 TUBGCP2Q9BSJ2 902 aa20.44■□□□□ 0.86
SNX17-201ENST00000233575 ST6GALNAC4Q9H4F1 302 aa20.44■□□□□ 0.86
SNX17-201ENST00000233575 SUGCTQ9HAC7 445 aa20.44■□□□□ 0.86
SNX17-201ENST00000233575 C17orf75Q9HAS0 396 aa20.44■□□□□ 0.86
SNX17-201ENST00000233575 CEP350Q5VT06 3117 aa20.44■□□□□ 0.86
SNX17-201ENST00000233575 DENND3A2RUS2 1198 aa20.44■□□□□ 0.86
SNX17-201ENST00000233575 CALUO43852 315 aaPredicted RBP20.44■□□□□ 0.86
SNX17-201ENST00000233575 NR3C1P04150 777 aa20.44■□□□□ 0.86
SNX17-201ENST00000233575 SMTNP53814 917 aa20.44■□□□□ 0.86
SNX17-201ENST00000233575 BEX3Q00994 111 aa20.44■□□□□ 0.86
SNX17-201ENST00000233575 ARID5BQ14865 1188 aa20.44■□□□□ 0.86
SNX17-201ENST00000233575 FAM114A1Q8IWE2 563 aa20.44■□□□□ 0.86
SNX17-201ENST00000233575 ANKRD20A12PQ8NF67 263 aa20.44■□□□□ 0.86
SNX17-201ENST00000233575 MTIF2P46199 727 aaKnown RBP20.43■□□□□ 0.86
SNX17-201ENST00000233575 MFSD14CQ5VZR4 134 aa20.43■□□□□ 0.86
SNX17-201ENST00000233575 SYCP3Q8IZU3 236 aa20.43■□□□□ 0.86
SNX17-201ENST00000233575 GBP3Q9H0R5 595 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms