RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 ZNF564Q8TBZ8 553 aaPredicted RBP14.32□□□□□ -0.12
NEK4-201ENST00000233027 TSC22D3Q99576 134 aa14.32□□□□□ -0.12
NEK4-201ENST00000233027 CENPKQ9BS16 269 aa14.32□□□□□ -0.12
NEK4-201ENST00000233027 NOC2LQ9Y3T9 749 aaKnown RBP14.32□□□□□ -0.12
NEK4-201ENST00000233027 HEY1Q9Y5J3 304 aa14.32□□□□□ -0.12
NEK4-201ENST00000233027 WDR17Q8IZU2 1322 aa14.31□□□□□ -0.12
NEK4-201ENST00000233027 POTEFA5A3E0 1075 aa14.31□□□□□ -0.12
NEK4-201ENST00000233027 FAM196BA6NMK8 535 aa14.31□□□□□ -0.12
NEK4-201ENST00000233027 USP17L10C9JJH3 530 aa14.31□□□□□ -0.12
NEK4-201ENST00000233027 SLC16A4O15374 487 aa14.31□□□□□ -0.12
NEK4-201ENST00000233027 CTIFO43310 598 aaKnown RBP14.31□□□□□ -0.12
NEK4-201ENST00000233027 POTEIP0CG38 1075 aa14.31□□□□□ -0.12
NEK4-201ENST00000233027 SOX5P35711 763 aa14.31□□□□□ -0.12
NEK4-201ENST00000233027 KPNA2P52292 529 aaKnown RBP14.31□□□□□ -0.12
NEK4-201ENST00000233027 SLC27A3Q5K4L6 730 aa14.31□□□□□ -0.12
NEK4-201ENST00000233027 POTEGQ6S5H5 508 aa14.31□□□□□ -0.12
NEK4-201ENST00000233027 POTEEQ6S8J3 1075 aa14.31□□□□□ -0.12
NEK4-201ENST00000233027 PDLIM2Q96JY6 352 aa14.31□□□□□ -0.12
NEK4-201ENST00000233027 TMEM60Q9H2L4 133 aa14.31□□□□□ -0.12
NEK4-201ENST00000233027 DGKHQ86XP1 1220 aa14.31□□□□□ -0.12
NEK4-201ENST00000233027 TGS1Q96RS0 853 aaKnown RBP14.31□□□□□ -0.12
NEK4-201ENST00000233027 MORC2Q9Y6X9 1032 aaPredicted RBP14.31□□□□□ -0.12
NEK4-201ENST00000233027 GUCY1A2P33402 732 aa14.31□□□□□ -0.12
NEK4-201ENST00000233027 PDCD2Q16342 344 aaPredicted RBP14.31□□□□□ -0.12
NEK4-201ENST00000233027 TBC1D9BQ66K14 1250 aa14.31□□□□□ -0.12
NEK4-201ENST00000233027 TMEM270Q6UE05 265 aa14.31□□□□□ -0.12
NEK4-201ENST00000233027 TRIML2Q8N7C3 387 aa14.31□□□□□ -0.12
NEK4-201ENST00000233027 OR6B3Q8NGW1 331 aa14.31□□□□□ -0.12
NEK4-201ENST00000233027 ZNF341Q9BYN7 854 aa14.31□□□□□ -0.12
NEK4-201ENST00000233027 YIPF3Q9GZM5 350 aa14.31□□□□□ -0.12
NEK4-201ENST00000233027 ADD3Q9UEY8 706 aaKnown RBP14.31□□□□□ -0.12
NEK4-201ENST00000233027 CFAP74Q9C0B2 1584 aa14.31□□□□□ -0.12
NEK4-201ENST00000233027 TMEM94Q12767 1356 aa14.31□□□□□ -0.12
NEK4-201ENST00000233027 ZBTB5O15062 677 aa14.31□□□□□ -0.12
NEK4-201ENST00000233027 BBOX1O75936 387 aa14.31□□□□□ -0.12
NEK4-201ENST00000233027 GH2P01242 217 aa14.31□□□□□ -0.12
NEK4-201ENST00000233027 PRELPP51888 382 aa14.31□□□□□ -0.12
NEK4-201ENST00000233027 GRAPQ13588 217 aa14.31□□□□□ -0.12
NEK4-201ENST00000233027 ALCAMQ13740 583 aa14.31□□□□□ -0.12
NEK4-201ENST00000233027 TMC4Q7Z404 712 aa14.31□□□□□ -0.12
NEK4-201ENST00000233027 GRAPLQ8TC17 118 aaPredicted RBP14.31□□□□□ -0.12
NEK4-201ENST00000233027 C11orf70Q9BRQ4 267 aa14.31□□□□□ -0.12
NEK4-201ENST00000233027 FAM213AQ9BRX8 229 aa14.31□□□□□ -0.12
NEK4-201ENST00000233027 CPSF3Q9UKF6 684 aaKnown RBP14.31□□□□□ -0.12
NEK4-201ENST00000233027 IPO5O00410 1097 aaKnown RBP14.31□□□□□ -0.12
NEK4-201ENST00000233027 EEF1DP29692 281 aaKnown RBP14.31□□□□□ -0.12
NEK4-201ENST00000233027 GUCY1A3Q02108 690 aa14.31□□□□□ -0.12
NEK4-201ENST00000233027 NLGN1Q8N2Q7 840 aa14.31□□□□□ -0.12
NEK4-201ENST00000233027 ALKBH8Q96BT7 664 aaKnown RBP14.31□□□□□ -0.12
NEK4-201ENST00000233027 NCAPGQ9BPX3 1015 aa14.31□□□□□ -0.12
NEK4-201ENST00000233027 KLC2Q9H0B6 622 aa14.31□□□□□ -0.12
NEK4-201ENST00000233027 SUDS3Q9H7L9 328 aaPredicted RBP14.31□□□□□ -0.12
NEK4-201ENST00000233027 PROM2Q8N271 834 aa14.3□□□□□ -0.12
NEK4-201ENST00000233027 MS4A14Q96JA4 679 aa14.3□□□□□ -0.12
NEK4-201ENST00000233027 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.3□□□□□ -0.124e-6■□□□□ 8
NEK4-201ENST00000233027 IRX2Q9BZI1 471 aaPredicted RBP14.3□□□□□ -0.12
NEK4-201ENST00000233027 INTS2Q9H0H0 1204 aaKnown RBP14.3□□□□□ -0.12
NEK4-201ENST00000233027 ARAP3Q8WWN8 1544 aa14.3□□□□□ -0.12
NEK4-201ENST00000233027 NOP14P78316 857 aaKnown RBP14.3□□□□□ -0.12
NEK4-201ENST00000233027 DRAP1Q14919 205 aaPredicted RBP14.3□□□□□ -0.12
NEK4-201ENST00000233027 GGT7Q9UJ14 662 aa14.3□□□□□ -0.12
NEK4-201ENST00000233027 C1orf146Q5VVC0 180 aa14.3□□□□□ -0.12
NEK4-201ENST00000233027 FLAD1Q8NFF5 587 aa14.3□□□□□ -0.12
NEK4-201ENST00000233027 TAF1DQ9H5J8 278 aaPredicted RBP14.3□□□□□ -0.12
NEK4-201ENST00000233027 ZRANB2O95218 330 aaKnown RBP eCLIP14.3□□□□□ -0.12
NEK4-201ENST00000233027 OSBPP22059 807 aa14.3□□□□□ -0.12
NEK4-201ENST00000233027 VSNL1P62760 191 aa14.3□□□□□ -0.12
NEK4-201ENST00000233027 CDHR1Q96JP9 859 aa14.3□□□□□ -0.12
NEK4-201ENST00000233027 OLA1Q9NTK5 396 aaKnown RBP14.3□□□□□ -0.12
NEK4-201ENST00000233027 FGFR4P22455 802 aa14.29□□□□□ -0.12
NEK4-201ENST00000233027 NSUN2Q08J23 767 aaKnown RBP eCLIP14.29□□□□□ -0.12
NEK4-201ENST00000233027 MKRN3Q13064 507 aaKnown RBP14.29□□□□□ -0.12
NEK4-201ENST00000233027 MTMR1Q13613 665 aa14.29□□□□□ -0.12
NEK4-201ENST00000233027 KNOP1Q1ED39 458 aaKnown RBP14.29□□□□□ -0.12
NEK4-201ENST00000233027 EP400NLQ6ZTU2 488 aa14.29□□□□□ -0.12
NEK4-201ENST00000233027 CEP70Q8NHQ1 597 aa14.29□□□□□ -0.12
NEK4-201ENST00000233027 ATP6V1G3Q96LB4 118 aa14.29□□□□□ -0.12
NEK4-201ENST00000233027 NPHP3-ACAD11A0A0J9YXS1 232 aa14.29□□□□□ -0.12
NEK4-201ENST00000233027 KRT37O76014 449 aa14.29□□□□□ -0.12
NEK4-201ENST00000233027 FTLP02792 175 aaPredicted RBP14.29□□□□□ -0.12
NEK4-201ENST00000233027 PADI6Q6TGC4 694 aa14.29□□□□□ -0.12
NEK4-201ENST00000233027 ABI1Q8IZP0 508 aa14.29□□□□□ -0.12
NEK4-201ENST00000233027 PARD3BQ8TEW8 1205 aa14.29□□□□□ -0.12
NEK4-201ENST00000233027 C1orf54Q8WWF1 131 aa14.29□□□□□ -0.12
NEK4-201ENST00000233027 HPS3Q969F9 1004 aa14.29□□□□□ -0.12
NEK4-201ENST00000233027 KIF2CQ99661 725 aa14.29□□□□□ -0.12
NEK4-201ENST00000233027 FGFR1OP2Q9NVK5 253 aa14.29□□□□□ -0.12
NEK4-201ENST00000233027 FBXL5Q9UKA1 691 aa14.29□□□□□ -0.12
NEK4-201ENST00000233027 LAMC1P11047 1609 aa14.29□□□□□ -0.12
NEK4-201ENST00000233027 MIF4GDA9UHW6 222 aaKnown RBP14.29□□□□□ -0.12
NEK4-201ENST00000233027 DNAJC8O75937 253 aaPredicted RBP14.29□□□□□ -0.12
NEK4-201ENST00000233027 LMNAP02545 664 aaKnown RBP14.29□□□□□ -0.12
NEK4-201ENST00000233027 PMLP29590 882 aa14.29□□□□□ -0.12
NEK4-201ENST00000233027 METTL16Q86W50 562 aaKnown RBP14.29□□□□□ -0.12
NEK4-201ENST00000233027 FBXL13Q8NEE6 735 aa14.29□□□□□ -0.12
NEK4-201ENST00000233027 VPS11Q9H270 941 aa14.29□□□□□ -0.12
NEK4-201ENST00000233027 XPAP23025 273 aaPredicted RBP14.29□□□□□ -0.12
NEK4-201ENST00000233027 HOXA7P31268 230 aaPredicted RBP14.29□□□□□ -0.12
NEK4-201ENST00000233027 AP3B2Q13367 1082 aa14.29□□□□□ -0.12
NEK4-201ENST00000233027 ICE2Q659A1 982 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms