RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 GLI1P08151 1106 aa23.94■■□□□ 1.42
SMARCD2-201ENST00000225742 MAP3K10Q02779 954 aa23.94■■□□□ 1.42
SMARCD2-201ENST00000225742 TUBB8Q3ZCM7 444 aa23.94■■□□□ 1.42
SMARCD2-201ENST00000225742 EPB41L5Q9HCM4 733 aa23.94■■□□□ 1.42
SMARCD2-201ENST00000225742 DBR1Q9UK59 544 aaKnown RBP23.94■■□□□ 1.42
SMARCD2-201ENST00000225742 STXBP5LQ9Y2K9 1186 aa23.94■■□□□ 1.42
SMARCD2-201ENST00000225742 NCANO14594 1321 aa23.93■■□□□ 1.42
SMARCD2-201ENST00000225742 CCDC188H7C350 402 aa23.93■■□□□ 1.42
SMARCD2-201ENST00000225742 GUCY2DQ02846 1103 aa23.93■■□□□ 1.42
SMARCD2-201ENST00000225742 MCF2L2Q86YR7 1114 aa23.93■■□□□ 1.42
SMARCD2-201ENST00000225742 U2AF1L4Q8WU68 220 aaKnown RBP23.93■■□□□ 1.42
SMARCD2-201ENST00000225742 INTS2Q9H0H0 1204 aaKnown RBP23.93■■□□□ 1.42
SMARCD2-201ENST00000225742 TMEM206Q9H813 350 aa23.93■■□□□ 1.42
SMARCD2-201ENST00000225742 POLD4Q9HCU8 107 aa23.93■■□□□ 1.42
SMARCD2-201ENST00000225742 DNAJC12Q9UKB3 198 aa23.93■■□□□ 1.42
SMARCD2-201ENST00000225742 EVI5O60447 810 aa23.92■■□□□ 1.42
SMARCD2-201ENST00000225742 ASNSP08243 561 aa23.92■■□□□ 1.42
SMARCD2-201ENST00000225742 TMEM253P0C7T8 217 aa23.92■■□□□ 1.42
SMARCD2-201ENST00000225742 UBXN2AP68543 259 aa23.92■■□□□ 1.42
SMARCD2-201ENST00000225742 RIN2Q8WYP3 895 aaPredicted RBP23.92■■□□□ 1.42
SMARCD2-201ENST00000225742 MAP3K20Q9NYL2 800 aaKnown RBP23.92■■□□□ 1.42
SMARCD2-201ENST00000225742 WRAP73Q9P2S5 460 aaPredicted RBP23.92■■□□□ 1.42
SMARCD2-201ENST00000225742 PACSIN2Q9UNF0 486 aaPredicted RBP23.92■■□□□ 1.42
SMARCD2-201ENST00000225742 PGRMC1O00264 195 aaKnown RBP23.91■■□□□ 1.42
SMARCD2-201ENST00000225742 ZBTB39O15060 712 aa23.91■■□□□ 1.42
SMARCD2-201ENST00000225742 HIP1RO75146 1068 aa23.91■■□□□ 1.42
SMARCD2-201ENST00000225742 P4HBP07237 508 aaKnown RBP23.91■■□□□ 1.42
SMARCD2-201ENST00000225742 ZBTB48P10074 688 aaPredicted RBP23.91■■□□□ 1.42
SMARCD2-201ENST00000225742 SNRPFP62306 86 aaKnown RBP23.91■■□□□ 1.42
SMARCD2-201ENST00000225742 MAPK7Q13164 816 aa23.91■■□□□ 1.42
SMARCD2-201ENST00000225742 DRAP1Q14919 205 aaPredicted RBP23.91■■□□□ 1.42
SMARCD2-201ENST00000225742 MIER3Q7Z3K6 550 aa23.91■■□□□ 1.42
SMARCD2-201ENST00000225742 PEX26Q7Z412 305 aa23.91■■□□□ 1.42
SMARCD2-201ENST00000225742 C12orf56Q8IXR9 622 aa23.91■■□□□ 1.42
SMARCD2-201ENST00000225742 SYCP3Q8IZU3 236 aa23.91■■□□□ 1.42
SMARCD2-201ENST00000225742 RASGEF1CQ8N431 466 aa23.91■■□□□ 1.42
SMARCD2-201ENST00000225742 TSEN2Q8NCE0 465 aaKnown RBP23.91■■□□□ 1.42
SMARCD2-201ENST00000225742 AGBL3Q8NEM8 1001 aa23.91■■□□□ 1.42
SMARCD2-201ENST00000225742 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.91■■□□□ 1.428e-10■■■■□ 26.7
SMARCD2-201ENST00000225742 TIPINQ9BVW5 301 aa23.91■■□□□ 1.42
SMARCD2-201ENST00000225742 DIS3Q9Y2L1 958 aaKnown RBP23.91■■□□□ 1.42
SMARCD2-201ENST00000225742 TULP2O00295 520 aa23.91■■□□□ 1.42
SMARCD2-201ENST00000225742 P4HA2O15460 535 aa23.91■■□□□ 1.42
SMARCD2-201ENST00000225742 LYPLA2O95372 231 aa23.91■■□□□ 1.42
SMARCD2-201ENST00000225742 CARSP49589 748 aaKnown RBP23.91■■□□□ 1.42
SMARCD2-201ENST00000225742 DNA2P51530 1060 aa23.91■■□□□ 1.42
SMARCD2-201ENST00000225742 CYP2J2P51589 502 aa23.91■■□□□ 1.42
SMARCD2-201ENST00000225742 MRPS25P82663 173 aaKnown RBP23.91■■□□□ 1.42
SMARCD2-201ENST00000225742 MYL7Q01449 175 aa23.91■■□□□ 1.42
SMARCD2-201ENST00000225742 CUL1Q13616 776 aa23.91■■□□□ 1.42
SMARCD2-201ENST00000225742 GJB7Q6PEY0 223 aa23.91■■□□□ 1.42
SMARCD2-201ENST00000225742 PADI6Q6TGC4 694 aa23.91■■□□□ 1.42
SMARCD2-201ENST00000225742 LRRC31Q6UY01 552 aa23.91■■□□□ 1.42
SMARCD2-201ENST00000225742 CD302Q8IX05 232 aa23.91■■□□□ 1.42
SMARCD2-201ENST00000225742 TTLL6Q8N841 843 aa23.91■■□□□ 1.42
SMARCD2-201ENST00000225742 SYT11Q9BT88 431 aa23.91■■□□□ 1.42
SMARCD2-201ENST00000225742 LARSQ9P2J5 1176 aaKnown RBP23.91■■□□□ 1.42
SMARCD2-201ENST00000225742 APEX2Q9UBZ4 518 aa23.91■■□□□ 1.42
SMARCD2-201ENST00000225742 RAD17O75943 681 aa23.9■■□□□ 1.42
SMARCD2-201ENST00000225742 KRT13P13646 458 aa23.9■■□□□ 1.42
SMARCD2-201ENST00000225742 BFSP1Q12934 665 aa23.9■■□□□ 1.42
SMARCD2-201ENST00000225742 COG2Q14746 738 aa23.9■■□□□ 1.42
SMARCD2-201ENST00000225742 SLC30A10Q6XR72 485 aa23.9■■□□□ 1.42
SMARCD2-201ENST00000225742 LARGE2Q8N3Y3 721 aa23.9■■□□□ 1.42
SMARCD2-201ENST00000225742 C1orf131Q8NDD1 294 aaKnown RBP23.9■■□□□ 1.42
SMARCD2-201ENST00000225742 LNX1Q8TBB1 728 aaPredicted RBP23.9■■□□□ 1.42
SMARCD2-201ENST00000225742 CASKIN2Q8WXE0 1202 aa23.9■■□□□ 1.42
SMARCD2-201ENST00000225742 HINFPQ9BQA5 517 aa23.9■■□□□ 1.42
SMARCD2-201ENST00000225742 ISCUQ9H1K1 167 aa23.9■■□□□ 1.42
SMARCD2-201ENST00000225742 VEZTQ9HBM0 779 aa23.9■■□□□ 1.42
SMARCD2-201ENST00000225742 PNMA2Q9UL42 364 aa23.9■■□□□ 1.42
SMARCD2-201ENST00000225742 CCPG1Q9ULG6 757 aa23.9■■□□□ 1.42
SMARCD2-201ENST00000225742 NFU1Q9UMS0 254 aa23.9■■□□□ 1.42
SMARCD2-201ENST00000225742 BHMG1C9JSJ3 638 aaPredicted RBP23.89■■□□□ 1.42
SMARCD2-201ENST00000225742 MAPK13O15264 365 aa23.89■■□□□ 1.42
SMARCD2-201ENST00000225742 CEP104O60308 925 aa23.89■■□□□ 1.42
SMARCD2-201ENST00000225742 EXOC3O60645 756 aa23.89■■□□□ 1.42
SMARCD2-201ENST00000225742 GALCP54803 685 aa23.89■■□□□ 1.42
SMARCD2-201ENST00000225742 CFAP58Q5T655 872 aa23.89■■□□□ 1.42
SMARCD2-201ENST00000225742 INTS8Q75QN2 995 aaKnown RBP23.89■■□□□ 1.42
SMARCD2-201ENST00000225742 IQCKQ8N0W5 287 aa23.89■■□□□ 1.42
SMARCD2-201ENST00000225742 OLIG1Q8TAK6 271 aa23.89■■□□□ 1.42
SMARCD2-201ENST00000225742 TTC7AQ9ULT0 858 aaPredicted RBP23.89■■□□□ 1.42
SMARCD2-201ENST00000225742 RAD51CO43502 376 aa23.89■■□□□ 1.41
SMARCD2-201ENST00000225742 CETN1Q12798 172 aa23.89■■□□□ 1.41
SMARCD2-201ENST00000225742 KIF22Q14807 665 aa23.89■■□□□ 1.41
SMARCD2-201ENST00000225742 NT5DC3Q86UY8 548 aa23.89■■□□□ 1.41
SMARCD2-201ENST00000225742 DAW1Q8N136 415 aa23.89■■□□□ 1.41
SMARCD2-201ENST00000225742 METTL13Q8N6R0 699 aa23.89■■□□□ 1.41
SMARCD2-201ENST00000225742 BANK1Q8NDB2 785 aa23.89■■□□□ 1.41
SMARCD2-201ENST00000225742 IFT81Q8WYA0 676 aa23.89■■□□□ 1.41
SMARCD2-201ENST00000225742 RFFLQ8WZ73 363 aa23.89■■□□□ 1.41
SMARCD2-201ENST00000225742 ZBTB9Q96C00 473 aa23.89■■□□□ 1.41
SMARCD2-201ENST00000225742 HES6Q96HZ4 224 aa23.89■■□□□ 1.41
SMARCD2-201ENST00000225742 ACCSQ96QU6 501 aa23.89■■□□□ 1.41
SMARCD2-201ENST00000225742 TSPYL1Q9H0U9 437 aa23.89■■□□□ 1.41
SMARCD2-201ENST00000225742 TAF1DQ9H5J8 278 aaPredicted RBP23.89■■□□□ 1.41
SMARCD2-201ENST00000225742 GINM1Q9NU53 330 aa23.89■■□□□ 1.41
SMARCD2-201ENST00000225742 STK32BQ9NY57 414 aa23.89■■□□□ 1.41
SMARCD2-201ENST00000225742 PGAP2Q9UHJ9 254 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms