RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 FHOD1Q9Y613 1164 aa10.9□□□□□ -0.66
USP11-201ENST00000218348 LRRC37A2A6NM11 1700 aa10.9□□□□□ -0.66
USP11-201ENST00000218348 PLXNB2O15031 1838 aa10.9□□□□□ -0.66
USP11-201ENST00000218348 PPP1R12AO14974 1030 aaPredicted RBP10.9□□□□□ -0.66
USP11-201ENST00000218348 TUBB4AP04350 444 aa10.9□□□□□ -0.66
USP11-201ENST00000218348 XRCC5P13010 732 aaKnown RBP10.9□□□□□ -0.66
USP11-201ENST00000218348 H2AFXP16104 143 aaPredicted RBP10.9□□□□□ -0.66
USP11-201ENST00000218348 SCP2P22307 547 aa10.9□□□□□ -0.66
USP11-201ENST00000218348 CYP2C19P33261 490 aa10.9□□□□□ -0.66
USP11-201ENST00000218348 MRPS9P82933 396 aaKnown RBP10.9□□□□□ -0.66
USP11-201ENST00000218348 FSTL1Q12841 308 aa10.9□□□□□ -0.66
USP11-201ENST00000218348 ITGB3BPQ13352 177 aaPredicted RBP10.9□□□□□ -0.66
USP11-201ENST00000218348 SFMBT2Q5VUG0 894 aa10.9□□□□□ -0.66
USP11-201ENST00000218348 FAM160B2Q86V87 743 aa10.9□□□□□ -0.66
USP11-201ENST00000218348 PACS2Q86VP3 889 aa10.9□□□□□ -0.66
USP11-201ENST00000218348 TRIM59Q8IWR1 403 aa10.9□□□□□ -0.66
USP11-201ENST00000218348 MED4Q9NPJ6 270 aa10.9□□□□□ -0.66
USP11-201ENST00000218348 HIP1RO75146 1068 aa10.89□□□□□ -0.67
USP11-201ENST00000218348 FTCDO95954 541 aa10.89□□□□□ -0.67
USP11-201ENST00000218348 C2orf54Q08AI8 447 aa10.89□□□□□ -0.67
USP11-201ENST00000218348 KLHL30Q0D2K2 578 aa10.89□□□□□ -0.67
USP11-201ENST00000218348 MTMR1Q13613 665 aa10.89□□□□□ -0.67
USP11-201ENST00000218348 MEA1Q16626 185 aa10.89□□□□□ -0.67
USP11-201ENST00000218348 UGCGQ16739 394 aa10.89□□□□□ -0.67
USP11-201ENST00000218348 ARHGAP44Q17R89 818 aa10.89□□□□□ -0.67
USP11-201ENST00000218348 SUPT20HL1Q3ZLR7 823 aa10.89□□□□□ -0.67
USP11-201ENST00000218348 SH3D19Q5HYK7 790 aa10.89□□□□□ -0.67
USP11-201ENST00000218348 NFRKBQ6P4R8 1299 aa10.89□□□□□ -0.67
USP11-201ENST00000218348 PDXDC1Q6P996 788 aa10.89□□□□□ -0.67
USP11-201ENST00000218348 CCDC91Q7Z6B0 441 aa10.89□□□□□ -0.67
USP11-201ENST00000218348 SAPCD2Q86UD0 394 aa10.89□□□□□ -0.67
USP11-201ENST00000218348 CLEC4DQ8WXI8 215 aa10.89□□□□□ -0.67
USP11-201ENST00000218348 MXRA8Q9BRK3 442 aa10.89□□□□□ -0.67
USP11-201ENST00000218348 PARVGQ9HBI0 331 aa10.89□□□□□ -0.67
USP11-201ENST00000218348 AJAP1Q9UKB5 411 aaPredicted RBP10.89□□□□□ -0.67
USP11-201ENST00000218348 DNAH12Q6ZR08 3092 aa10.89□□□□□ -0.67
USP11-201ENST00000218348 SPDYE5A6NIY4 337 aa10.89□□□□□ -0.67
USP11-201ENST00000218348 K7ENM7 598 aa10.89□□□□□ -0.67
USP11-201ENST00000218348 TBX3O15119 743 aa10.89□□□□□ -0.67
USP11-201ENST00000218348 ICAM1P05362 532 aa10.89□□□□□ -0.67
USP11-201ENST00000218348 MAP2K2P36507 400 aa10.89□□□□□ -0.67
USP11-201ENST00000218348 ARHGEF16Q5VV41 709 aa10.89□□□□□ -0.67
USP11-201ENST00000218348 EEPD1Q7L9B9 569 aa10.89□□□□□ -0.67
USP11-201ENST00000218348 SYTL5Q8TDW5 730 aaPredicted RBP10.89□□□□□ -0.67
USP11-201ENST00000218348 MS4A4AQ96JQ5 239 aa10.89□□□□□ -0.67
USP11-201ENST00000218348 C12orf42Q96LP6 360 aa10.89□□□□□ -0.67
USP11-201ENST00000218348 SAR1BQ9Y6B6 198 aa10.89□□□□□ -0.67
USP11-201ENST00000218348 TLL2Q9Y6L7 1015 aa10.89□□□□□ -0.67
USP11-201ENST00000218348 RPS6KL1Q9Y6S9 549 aa10.89□□□□□ -0.67
USP11-201ENST00000218348 ASTN1O14525 1302 aa10.89□□□□□ -0.67
USP11-201ENST00000218348 PIK3CDO00329 1044 aa10.89□□□□□ -0.67
USP11-201ENST00000218348 FECHP22830 423 aa10.89□□□□□ -0.67
USP11-201ENST00000218348 EXOC3L4Q17RC7 722 aa10.89□□□□□ -0.67
USP11-201ENST00000218348 SNRNP48Q6IEG0 339 aaKnown RBP10.89□□□□□ -0.67
USP11-201ENST00000218348 PADI6Q6TGC4 694 aa10.89□□□□□ -0.67
USP11-201ENST00000218348 MOXD1Q6UVY6 613 aa10.89□□□□□ -0.67
USP11-201ENST00000218348 RNF207Q6ZRF8 634 aa10.89□□□□□ -0.67
USP11-201ENST00000218348 RETREG2Q8NC44 543 aa10.89□□□□□ -0.67
USP11-201ENST00000218348 PROCA1Q8NCQ7 364 aaPredicted RBP10.89□□□□□ -0.67
USP11-201ENST00000218348 SMC1BQ8NDV3 1235 aa10.89□□□□□ -0.67
USP11-201ENST00000218348 COG1Q8WTW3 980 aa10.89□□□□□ -0.67
USP11-201ENST00000218348 PICK1Q9NRD5 415 aa10.89□□□□□ -0.67
USP11-201ENST00000218348 A0A087X0T9 212 aa10.88□□□□□ -0.67
USP11-201ENST00000218348 CCDC169A6NNP5 214 aa10.88□□□□□ -0.67
USP11-201ENST00000218348 EIF3CLB5ME19 914 aaKnown RBP10.88□□□□□ -0.67
USP11-201ENST00000218348 PDE2AO00408 941 aaPredicted RBP10.88□□□□□ -0.67
USP11-201ENST00000218348 TGFB1I1O43294 461 aa10.88□□□□□ -0.67
USP11-201ENST00000218348 KIF1CO43896 1103 aaKnown RBP10.88□□□□□ -0.67
USP11-201ENST00000218348 PHACTR2O75167 634 aa10.88□□□□□ -0.67
USP11-201ENST00000218348 SASH3O75995 380 aa10.88□□□□□ -0.67
USP11-201ENST00000218348 FAM228BP0C875 321 aa10.88□□□□□ -0.67
USP11-201ENST00000218348 USP8P40818 1118 aa10.88□□□□□ -0.67
USP11-201ENST00000218348 VAV2P52735 878 aa10.88□□□□□ -0.67
USP11-201ENST00000218348 TKFCQ3LXA3 575 aa10.88□□□□□ -0.67
USP11-201ENST00000218348 C1orf186Q6ZWK4 172 aa10.88□□□□□ -0.67
USP11-201ENST00000218348 SLC5A5Q92911 643 aa10.88□□□□□ -0.67
USP11-201ENST00000218348 MS4A14Q96JA4 679 aa10.88□□□□□ -0.67
USP11-201ENST00000218348 HHIPL1Q96JK4 782 aa10.88□□□□□ -0.67
USP11-201ENST00000218348 EIF3CQ99613 913 aaKnown RBP10.88□□□□□ -0.67
USP11-201ENST00000218348 RNF146Q9NTX7 359 aa10.88□□□□□ -0.67
USP11-201ENST00000218348 GCNT4Q9P109 453 aa10.88□□□□□ -0.67
USP11-201ENST00000218348 BRCA2P51587 3418 aa10.88□□□□□ -0.67
USP11-201ENST00000218348 ANKRD65E5RJM6 399 aa10.88□□□□□ -0.67
USP11-201ENST00000218348 EXOC3O60645 756 aa10.88□□□□□ -0.67
USP11-201ENST00000218348 GFPT2O94808 682 aa10.88□□□□□ -0.67
USP11-201ENST00000218348 CYP3A4P08684 503 aa10.88□□□□□ -0.67
USP11-201ENST00000218348 EPB41P11171 864 aaKnown RBP10.88□□□□□ -0.67
USP11-201ENST00000218348 VSNL1P62760 191 aa10.88□□□□□ -0.67
USP11-201ENST00000218348 SLC9C1Q4G0N8 1177 aa10.88□□□□□ -0.67
USP11-201ENST00000218348 FAM102BQ5T8I3 360 aa10.88□□□□□ -0.67
USP11-201ENST00000218348 DCAF15Q66K64 600 aa10.88□□□□□ -0.67
USP11-201ENST00000218348 NAIF1Q69YI7 327 aaPredicted RBP10.88□□□□□ -0.67
USP11-201ENST00000218348 RSRC2Q7L4I2 434 aaKnown RBP10.88□□□□□ -0.67
USP11-201ENST00000218348 POLR3CQ9BUI4 534 aaPredicted RBP10.88□□□□□ -0.67
USP11-201ENST00000218348 ANKZF1Q9H8Y5 726 aa10.88□□□□□ -0.67
USP11-201ENST00000218348 EHMT1Q9H9B1 1298 aa10.88□□□□□ -0.67
USP11-201ENST00000218348 CHORDC1Q9UHD1 332 aaPredicted RBP10.88□□□□□ -0.67
USP11-201ENST00000218348 SLC16A4O15374 487 aa10.87□□□□□ -0.67
USP11-201ENST00000218348 CALUO43852 315 aaPredicted RBP10.87□□□□□ -0.67
USP11-201ENST00000218348 AFPP02771 609 aaKnown RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms