RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 DNM2P50570 870 aa30.21■■■□□ 2.43
CHMP4B-201ENST00000217402 MDM2Q00987 491 aaPredicted RBP30.21■■■□□ 2.43
CHMP4B-201ENST00000217402 MAPK7Q13164 816 aa30.21■■■□□ 2.43
CHMP4B-201ENST00000217402 LRRC26Q2I0M4 334 aa30.21■■■□□ 2.43
CHMP4B-201ENST00000217402 SERINC5Q86VE9 423 aa30.21■■■□□ 2.43
CHMP4B-201ENST00000217402 DAW1Q8N136 415 aa30.21■■■□□ 2.43
CHMP4B-201ENST00000217402 SUCLA2Q9P2R7 463 aaPredicted RBP30.21■■■□□ 2.43
CHMP4B-201ENST00000217402 ATP11BQ9Y2G3 1177 aa30.21■■■□□ 2.43
CHMP4B-201ENST00000217402 SMIM35A0A1B0GVV1 85 aa30.2■■■□□ 2.43
CHMP4B-201ENST00000217402 SFI1A8K8P3 1242 aa30.2■■■□□ 2.43
CHMP4B-201ENST00000217402 KLHL40Q2TBA0 621 aa30.2■■■□□ 2.43
CHMP4B-201ENST00000217402 DNAJB3Q8WWF6 145 aa30.2■■■□□ 2.43
CHMP4B-201ENST00000217402 TCP11Q8WWU5 503 aa30.2■■■□□ 2.43
CHMP4B-201ENST00000217402 WNT8BQ93098 351 aa30.2■■■□□ 2.43
CHMP4B-201ENST00000217402 TIPINQ9BVW5 301 aa30.2■■■□□ 2.43
CHMP4B-201ENST00000217402 AKT3Q9Y243 479 aa30.2■■■□□ 2.43
CHMP4B-201ENST00000217402 RTP1P59025 263 aa30.19■■■□□ 2.42
CHMP4B-201ENST00000217402 TAF2Q6P1X5 1199 aa30.19■■■□□ 2.42
CHMP4B-201ENST00000217402 KIAA0319LQ8IZA0 1049 aa30.19■■■□□ 2.42
CHMP4B-201ENST00000217402 DRC1Q96MC2 740 aa30.19■■■□□ 2.42
CHMP4B-201ENST00000217402 MAP7D2Q96T17 732 aa30.19■■■□□ 2.42
CHMP4B-201ENST00000217402 PPP1R16BQ96T49 567 aa30.19■■■□□ 2.42
CHMP4B-201ENST00000217402 ODF2LQ9ULJ1 636 aa30.19■■■□□ 2.42
CHMP4B-201ENST00000217402 FAM13AO94988 1023 aa30.18■■■□□ 2.42
CHMP4B-201ENST00000217402 VTNP04004 478 aa30.18■■■□□ 2.42
CHMP4B-201ENST00000217402 TLE2Q04725 743 aa30.18■■■□□ 2.42
CHMP4B-201ENST00000217402 DPYDQ12882 1025 aa30.18■■■□□ 2.42
CHMP4B-201ENST00000217402 C1orf53Q5VUE5 145 aa30.18■■■□□ 2.42
CHMP4B-201ENST00000217402 IER5Q5VY09 327 aa30.18■■■□□ 2.42
CHMP4B-201ENST00000217402 PRPF31Q8WWY3 499 aaKnown RBP30.18■■■□□ 2.42
CHMP4B-201ENST00000217402 PSPC1Q8WXF1 523 aaKnown RBP30.18■■■□□ 2.42
CHMP4B-201ENST00000217402 KIFAP3Q92845 792 aa30.18■■■□□ 2.42
CHMP4B-201ENST00000217402 TRAK2O60296 914 aa30.18■■■□□ 2.42
CHMP4B-201ENST00000217402 MYL1P05976 194 aa30.18■■■□□ 2.42
CHMP4B-201ENST00000217402 TMEM62Q0P6H9 643 aa30.18■■■□□ 2.42
CHMP4B-201ENST00000217402 PTK7Q13308 1070 aa30.18■■■□□ 2.42
CHMP4B-201ENST00000217402 CAVIN1Q6NZI2 390 aaKnown RBP30.18■■■□□ 2.42
CHMP4B-201ENST00000217402 ANKRD33Q7Z3H0 272 aa30.18■■■□□ 2.42
CHMP4B-201ENST00000217402 RHPN2Q8IUC4 686 aa30.18■■■□□ 2.42
CHMP4B-201ENST00000217402 ELOA2Q8IYF1 753 aaPredicted RBP30.18■■■□□ 2.42
CHMP4B-201ENST00000217402 ASAP3Q8TDY4 903 aa30.18■■■□□ 2.42
CHMP4B-201ENST00000217402 TLR3O15455 904 aaKnown RBP30.17■■■□□ 2.42
CHMP4B-201ENST00000217402 ARL2P36404 184 aa30.17■■■□□ 2.42
CHMP4B-201ENST00000217402 CNNM4Q6P4Q7 775 aa30.17■■■□□ 2.42
CHMP4B-201ENST00000217402 KSR1Q8IVT5 923 aa30.17■■■□□ 2.42
CHMP4B-201ENST00000217402 DHX38Q92620 1227 aaKnown RBP30.17■■■□□ 2.42
CHMP4B-201ENST00000217402 ZNF668Q96K58 619 aaPredicted RBP30.17■■■□□ 2.42
CHMP4B-201ENST00000217402 PANK4Q9NVE7 773 aa30.17■■■□□ 2.42
CHMP4B-201ENST00000217402 EVPLQ92817 2033 aa30.16■■■□□ 2.42
CHMP4B-201ENST00000217402 DCDC2CA8MYV0 355 aa30.16■■■□□ 2.42
CHMP4B-201ENST00000217402 CD4P01730 458 aa30.16■■■□□ 2.42
CHMP4B-201ENST00000217402 SKOR2Q2VWA4 1001 aaPredicted RBP30.16■■■□□ 2.42
CHMP4B-201ENST00000217402 BSNDQ8WZ55 320 aa30.16■■■□□ 2.42
CHMP4B-201ENST00000217402 PARVGQ9HBI0 331 aa30.16■■■□□ 2.42
CHMP4B-201ENST00000217402 TMEM63CQ9P1W3 806 aa30.16■■■□□ 2.42
CHMP4B-201ENST00000217402 MKI67P46013 3256 aaKnown RBP30.16■■■□□ 2.42
CHMP4B-201ENST00000217402 GLRA2P23416 452 aa30.15■■■□□ 2.42
CHMP4B-201ENST00000217402 CCDC65Q8IXS2 484 aa30.15■■■□□ 2.42
CHMP4B-201ENST00000217402 MYCT1Q8N699 235 aa30.15■■■□□ 2.42
CHMP4B-201ENST00000217402 COL4A3BPQ9Y5P4 624 aa30.15■■■□□ 2.42
CHMP4B-201ENST00000217402 RPN1P04843 607 aaKnown RBP30.14■■■□□ 2.42
CHMP4B-201ENST00000217402 LAMTOR4Q0VGL1 99 aa30.14■■■□□ 2.42
CHMP4B-201ENST00000217402 CCDC183Q5T5S1 534 aa30.14■■■□□ 2.42
CHMP4B-201ENST00000217402 UNC13DQ70J99 1090 aa30.14■■■□□ 2.42
CHMP4B-201ENST00000217402 NLRP4Q96MN2 994 aa30.14■■■□□ 2.42
CHMP4B-201ENST00000217402 PCDHA5Q9Y5H7 936 aa30.14■■■□□ 2.42
CHMP4B-201ENST00000217402 PLS3P13797 630 aa30.14■■■□□ 2.41
CHMP4B-201ENST00000217402 THPOP40225 353 aa30.14■■■□□ 2.41
CHMP4B-201ENST00000217402 ZNF131P52739 623 aa30.14■■■□□ 2.41
CHMP4B-201ENST00000217402 PEX3P56589 373 aa30.14■■■□□ 2.41
CHMP4B-201ENST00000217402 COASYQ13057 564 aa30.14■■■□□ 2.41
CHMP4B-201ENST00000217402 ODR4Q5SWX8 454 aa30.14■■■□□ 2.41
CHMP4B-201ENST00000217402 RSPH3Q86UC2 560 aa30.14■■■□□ 2.41
CHMP4B-201ENST00000217402 SFR1Q86XK3 245 aa30.14■■■□□ 2.41
CHMP4B-201ENST00000217402 SMARCE1Q969G3 411 aa30.14■■■□□ 2.41
CHMP4B-201ENST00000217402 IFT74Q96LB3 600 aa30.14■■■□□ 2.41
CHMP4B-201ENST00000217402 TOX2Q96NM4 488 aa30.14■■■□□ 2.41
CHMP4B-201ENST00000217402 FRMD3A2A2Y4 597 aa30.13■■■□□ 2.41
CHMP4B-201ENST00000217402 KLRC4O43908 158 aa30.13■■■□□ 2.41
CHMP4B-201ENST00000217402 SMC2O95347 1197 aa30.13■■■□□ 2.41
CHMP4B-201ENST00000217402 CTSHP09668 335 aa30.13■■■□□ 2.41
CHMP4B-201ENST00000217402 SRGAP2CP0DJJ0 459 aa30.13■■■□□ 2.41
CHMP4B-201ENST00000217402 FAAP100Q0VG06 881 aa30.13■■■□□ 2.41
CHMP4B-201ENST00000217402 DMP1Q13316 513 aaPredicted RBP30.13■■■□□ 2.41
CHMP4B-201ENST00000217402 CAPSQ13938 189 aa30.13■■■□□ 2.41
CHMP4B-201ENST00000217402 MXD4Q14582 209 aaPredicted RBP30.13■■■□□ 2.41
CHMP4B-201ENST00000217402 HERC4Q5GLZ8 1057 aaPredicted RBP30.13■■■□□ 2.41
CHMP4B-201ENST00000217402 SCLT1Q96NL6 688 aa30.13■■■□□ 2.41
CHMP4B-201ENST00000217402 TBC1D7Q9P0N9 293 aa30.13■■■□□ 2.41
CHMP4B-201ENST00000217402 LARSQ9P2J5 1176 aaKnown RBP30.13■■■□□ 2.41
CHMP4B-201ENST00000217402 GINS2Q9Y248 185 aa30.13■■■□□ 2.41
CHMP4B-201ENST00000217402 KIZQ2M2Z5 673 aa30.12■■■□□ 2.41
CHMP4B-201ENST00000217402 TRIM71Q2Q1W2 868 aaKnown RBP30.12■■■□□ 2.41
CHMP4B-201ENST00000217402 KMT5BQ4FZB7 885 aa30.12■■■□□ 2.41
CHMP4B-201ENST00000217402 HPS3Q969F9 1004 aa30.12■■■□□ 2.41
CHMP4B-201ENST00000217402 SYAP1Q96A49 352 aaPredicted RBP30.12■■■□□ 2.41
CHMP4B-201ENST00000217402 KIFC3Q9BVG8 833 aa30.12■■■□□ 2.41
CHMP4B-201ENST00000217402 EXOC1Q9NV70 894 aa30.12■■■□□ 2.41
CHMP4B-201ENST00000217402 PVALEFA0A1B0GWK0 134 aa30.11■■■□□ 2.41
CHMP4B-201ENST00000217402 LRRIQ4A6NIV6 560 aa30.11■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms