RNA–Protein interactions for RNA: ENST00000216456.6

VTI1B-201, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 1 (best)

Gene VTI1B, Length 1,103 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-201ENST00000216456 CTC1Q2NKJ3 1217 aa24.91■■□□□ 1.58
VTI1B-201ENST00000216456 SPOUT1Q5T280 376 aaKnown RBP24.91■■□□□ 1.58
VTI1B-201ENST00000216456 ZNF579Q8NAF0 562 aaKnown RBP24.91■■□□□ 1.58
VTI1B-201ENST00000216456 P2RX5Q93086 422 aa24.91■■□□□ 1.58
VTI1B-201ENST00000216456 WRAP73Q9P2S5 460 aaPredicted RBP24.91■■□□□ 1.58
VTI1B-201ENST00000216456 ORC3Q9UBD5 711 aaPredicted RBP24.91■■□□□ 1.58
VTI1B-201ENST00000216456 VAV3Q9UKW4 847 aa24.91■■□□□ 1.58
VTI1B-201ENST00000216456 FNDC1Q4ZHG4 1894 aaPredicted RBP24.91■■□□□ 1.58
VTI1B-201ENST00000216456 STK36Q9NRP7 1315 aa24.9■■□□□ 1.58
VTI1B-201ENST00000216456 CCDC194A0A1B0GVG4 234 aa24.9■■□□□ 1.58
VTI1B-201ENST00000216456 FAM86C2PA6NEL3 165 aa24.9■■□□□ 1.58
VTI1B-201ENST00000216456 DDX11L8A8MPP1 907 aa24.9■■□□□ 1.58
VTI1B-201ENST00000216456 EIF4BP23588 611 aaKnown RBP24.9■■□□□ 1.58
VTI1B-201ENST00000216456 TMOD1P28289 359 aa24.9■■□□□ 1.58
VTI1B-201ENST00000216456 PBX3P40426 434 aa24.9■■□□□ 1.58
VTI1B-201ENST00000216456 NR5A1Q13285 461 aa24.9■■□□□ 1.58
VTI1B-201ENST00000216456 GALNT17Q6IS24 598 aa24.9■■□□□ 1.58
VTI1B-201ENST00000216456 LRRC55Q6ZSA7 311 aa24.9■■□□□ 1.58
VTI1B-201ENST00000216456 RBM23Q86U06 439 aaKnown RBP24.9■■□□□ 1.58
VTI1B-201ENST00000216456 SCLT1Q96NL6 688 aa24.9■■□□□ 1.58
VTI1B-201ENST00000216456 NIFKQ9BYG3 293 aaKnown RBP24.9■■□□□ 1.58
VTI1B-201ENST00000216456 CWH43Q9H720 699 aa24.9■■□□□ 1.58
VTI1B-201ENST00000216456 ATP6V0A4Q9HBG4 840 aa24.9■■□□□ 1.58
VTI1B-201ENST00000216456 PLXNA4Q9HCM2 1894 aa24.89■■□□□ 1.58
VTI1B-201ENST00000216456 CDKL5O76039 1030 aa24.89■■□□□ 1.58
VTI1B-201ENST00000216456 DARSP14868 501 aaKnown RBP24.89■■□□□ 1.58
VTI1B-201ENST00000216456 RBM10P98175 930 aaKnown RBP24.89■■□□□ 1.58
VTI1B-201ENST00000216456 XKR3Q5GH77 459 aa24.89■■□□□ 1.58
VTI1B-201ENST00000216456 MOXD1Q6UVY6 613 aa24.89■■□□□ 1.58
VTI1B-201ENST00000216456 ANO5Q75V66 913 aa24.89■■□□□ 1.58
VTI1B-201ENST00000216456 KSR1Q8IVT5 923 aa24.89■■□□□ 1.58
VTI1B-201ENST00000216456 GJD3Q8N144 294 aa24.89■■□□□ 1.58
VTI1B-201ENST00000216456 RNF169Q8NCN4 708 aa24.89■■□□□ 1.58
VTI1B-201ENST00000216456 NLRP7Q8WX94 980 aa24.89■■□□□ 1.58
VTI1B-201ENST00000216456 HAS1Q92839 578 aa24.89■■□□□ 1.58
VTI1B-201ENST00000216456 KCNMB3Q9NPA1 279 aa24.89■■□□□ 1.58
VTI1B-201ENST00000216456 C11orf16Q9NQ32 467 aa24.89■■□□□ 1.58
VTI1B-201ENST00000216456 TMEM161AQ9NX61 479 aa24.89■■□□□ 1.58
VTI1B-201ENST00000216456 CCNT1O60563 726 aaKnown RBP24.88■■□□□ 1.57
VTI1B-201ENST00000216456 SSTR3P32745 418 aaPredicted RBP24.88■■□□□ 1.57
VTI1B-201ENST00000216456 NPEPPSP55786 919 aa24.88■■□□□ 1.57
VTI1B-201ENST00000216456 ODR4Q5SWX8 454 aa24.88■■□□□ 1.57
VTI1B-201ENST00000216456 NEK8Q86SG6 692 aa24.88■■□□□ 1.57
VTI1B-201ENST00000216456 POTEDQ86YR6 584 aa24.88■■□□□ 1.57
VTI1B-201ENST00000216456 RDM1Q8NG50 284 aa24.88■■□□□ 1.57
VTI1B-201ENST00000216456 CASD1Q96PB1 797 aa24.88■■□□□ 1.57
VTI1B-201ENST00000216456 BMP2KQ9NSY1 1161 aaPredicted RBP24.88■■□□□ 1.57
VTI1B-201ENST00000216456 A0A087WZ62 844 aa24.87■■□□□ 1.57
VTI1B-201ENST00000216456 JAK2O60674 1132 aa24.87■■□□□ 1.57
VTI1B-201ENST00000216456 ANAPC15P60006 121 aa24.87■■□□□ 1.57
VTI1B-201ENST00000216456 ST3GAL1Q11201 340 aa24.87■■□□□ 1.57
VTI1B-201ENST00000216456 ECHDC2Q86YB7 292 aa24.87■■□□□ 1.57
VTI1B-201ENST00000216456 COLGALT1Q8NBJ5 622 aa24.87■■□□□ 1.57
VTI1B-201ENST00000216456 FDXACB1Q9BRP7 624 aaPredicted RBP24.87■■□□□ 1.57
VTI1B-201ENST00000216456 IGKV6-21A0A0C4DH24 114 aa24.86■■□□□ 1.57
VTI1B-201ENST00000216456 WNT7AO00755 349 aa24.86■■□□□ 1.57
VTI1B-201ENST00000216456 PER2O15055 1255 aa24.86■■□□□ 1.57
VTI1B-201ENST00000216456 NRIP1P48552 1158 aa24.86■■□□□ 1.57
VTI1B-201ENST00000216456 ERVFC1P60507 584 aa24.86■■□□□ 1.57
VTI1B-201ENST00000216456 ADAM15Q13444 863 aa24.86■■□□□ 1.57
VTI1B-201ENST00000216456 LONRF3Q496Y0 759 aa24.86■■□□□ 1.57
VTI1B-201ENST00000216456 CLLU1OSQ5K130 101 aa24.86■■□□□ 1.57
VTI1B-201ENST00000216456 ZBTB39O15060 712 aa24.85■■□□□ 1.57
VTI1B-201ENST00000216456 FGF18O76093 207 aa24.85■■□□□ 1.57
VTI1B-201ENST00000216456 ATF7P17544 494 aaPredicted RBP24.85■■□□□ 1.57
VTI1B-201ENST00000216456 PSMC5P62195 406 aa24.85■■□□□ 1.57
VTI1B-201ENST00000216456 PPP2R5CQ13362 524 aa24.85■■□□□ 1.57
VTI1B-201ENST00000216456 NAALADL2Q58DX5 795 aa24.85■■□□□ 1.57
VTI1B-201ENST00000216456 FAM177A1Q8N128 213 aaPredicted RBP24.85■■□□□ 1.57
VTI1B-201ENST00000216456 TNFRSF25Q93038 417 aa24.85■■□□□ 1.57
VTI1B-201ENST00000216456 GTF3C6Q969F1 213 aa24.85■■□□□ 1.57
VTI1B-201ENST00000216456 LRFN3Q9BTN0 628 aa24.85■■□□□ 1.57
VTI1B-201ENST00000216456 ELAC1Q9H777 363 aaKnown RBP24.85■■□□□ 1.57
VTI1B-201ENST00000216456 RGL1Q9NZL6 768 aa24.85■■□□□ 1.57
VTI1B-201ENST00000216456 CLEC1BQ9P126 229 aa24.85■■□□□ 1.57
VTI1B-201ENST00000216456 SUCLA2Q9P2R7 463 aaPredicted RBP24.85■■□□□ 1.57
VTI1B-201ENST00000216456 PCDHB12Q9Y5F1 795 aa24.85■■□□□ 1.57
VTI1B-201ENST00000216456 MBTPS2O43462 519 aa24.84■■□□□ 1.57
VTI1B-201ENST00000216456 GLP2RO95838 553 aa24.84■■□□□ 1.57
VTI1B-201ENST00000216456 ZSCAN20P17040 1043 aaPredicted RBP24.84■■□□□ 1.57
VTI1B-201ENST00000216456 PPP4R3AQ6IN85 833 aa24.84■■□□□ 1.57
VTI1B-201ENST00000216456 RHPN2Q8IUC4 686 aa24.84■■□□□ 1.57
VTI1B-201ENST00000216456 THNSL1Q8IYQ7 743 aa24.84■■□□□ 1.57
VTI1B-201ENST00000216456 NSUN7Q8NE18 718 aaKnown RBP24.84■■□□□ 1.57
VTI1B-201ENST00000216456 HELQQ8TDG4 1101 aa24.84■■□□□ 1.57
VTI1B-201ENST00000216456 MICAL1Q8TDZ2 1067 aa24.84■■□□□ 1.57
VTI1B-201ENST00000216456 C1QTNF1Q9BXJ1 281 aa24.84■■□□□ 1.57
VTI1B-201ENST00000216456 TMEM117Q9H0C3 514 aa24.84■■□□□ 1.57
VTI1B-201ENST00000216456 BARX2Q9UMQ3 279 aaPredicted RBP24.84■■□□□ 1.57
VTI1B-201ENST00000216456 MAFO75444 373 aaPredicted RBP24.83■■□□□ 1.57
VTI1B-201ENST00000216456 NEK4P51957 841 aa24.83■■□□□ 1.57
VTI1B-201ENST00000216456 ZP2Q05996 745 aa24.83■■□□□ 1.57
VTI1B-201ENST00000216456 NCAPH2Q6IBW4 605 aa24.83■■□□□ 1.57
VTI1B-201ENST00000216456 ZNF598Q86UK7 904 aaKnown RBP24.83■■□□□ 1.57
VTI1B-201ENST00000216456 VN1R2Q8NFZ6 395 aa24.83■■□□□ 1.57
VTI1B-201ENST00000216456 LPPQ93052 612 aa24.83■■□□□ 1.57
VTI1B-201ENST00000216456 NLRP4Q96MN2 994 aa24.83■■□□□ 1.57
VTI1B-201ENST00000216456 MEIS3P2A8K0S8 358 aa24.82■■□□□ 1.56
VTI1B-201ENST00000216456 XBP1P17861 261 aa24.82■■□□□ 1.56
VTI1B-201ENST00000216456 QARSP47897 775 aaKnown RBP24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms