RNA–Protein interactions for RNA: ENST00000216414.12

CDKN3-201, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best)

Gene CDKN3, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-201ENST00000216414 ZBTB38Q8NAP3 1195 aaPredicted RBP4.29□□□□□ -1.72
CDKN3-201ENST00000216414 GPR150Q8NGU9 434 aa4.29□□□□□ -1.72
CDKN3-201ENST00000216414 SLC25A43Q8WUT9 341 aaPredicted RBP4.29□□□□□ -1.72
CDKN3-201ENST00000216414 GFM2Q969S9 779 aaKnown RBP4.29□□□□□ -1.72
CDKN3-201ENST00000216414 EXOC2Q96KP1 924 aa4.29□□□□□ -1.72
CDKN3-201ENST00000216414 GPHA2Q96T91 129 aa4.29□□□□□ -1.72
CDKN3-201ENST00000216414 TCF25Q9BQ70 676 aa4.29□□□□□ -1.72
CDKN3-201ENST00000216414 NDOR1Q9UHB4 597 aa4.29□□□□□ -1.72
CDKN3-201ENST00000216414 RCAN3Q9UKA8 241 aa4.29□□□□□ -1.72
CDKN3-201ENST00000216414 XDHP47989 1333 aa4.28□□□□□ -1.72
CDKN3-201ENST00000216414 SLC12A8A0AV02 714 aa4.28□□□□□ -1.72
CDKN3-201ENST00000216414 UBE2QL1A1L167 161 aa4.28□□□□□ -1.72
CDKN3-201ENST00000216414 C2orf78A6NCI8 922 aa4.28□□□□□ -1.72
CDKN3-201ENST00000216414 ADRA1BP35368 520 aa4.28□□□□□ -1.72
CDKN3-201ENST00000216414 SMAD3P84022 425 aaKnown RBP4.28□□□□□ -1.72
CDKN3-201ENST00000216414 ALDH6A1Q02252 535 aaKnown RBP4.28□□□□□ -1.72
CDKN3-201ENST00000216414 RABL3Q5HYI8 236 aa4.28□□□□□ -1.72
CDKN3-201ENST00000216414 FKBP15Q5T1M5 1219 aa4.28□□□□□ -1.72
CDKN3-201ENST00000216414 KRT40Q6A162 431 aa4.28□□□□□ -1.72
CDKN3-201ENST00000216414 VRK3Q8IV63 474 aa4.28□□□□□ -1.72
CDKN3-201ENST00000216414 ATXN2LQ8WWM7 1075 aaKnown RBP4.28□□□□□ -1.72
CDKN3-201ENST00000216414 B3GALT1Q9Y5Z6 326 aa4.28□□□□□ -1.72
CDKN3-201ENST00000216414 MAFO75444 373 aaPredicted RBP4.27□□□□□ -1.73
CDKN3-201ENST00000216414 RHOBTB3O94955 611 aa4.27□□□□□ -1.73
CDKN3-201ENST00000216414 RASGRP1O95267 797 aa4.27□□□□□ -1.73
CDKN3-201ENST00000216414 FAM153BP0C7A2 387 aa4.27□□□□□ -1.73
CDKN3-201ENST00000216414 MRPS21P82921 87 aaKnown RBP4.27□□□□□ -1.73
CDKN3-201ENST00000216414 CATSPEREQ5SY80 951 aa4.27□□□□□ -1.73
CDKN3-201ENST00000216414 ELOA2Q8IYF1 753 aaPredicted RBP4.27□□□□□ -1.73
CDKN3-201ENST00000216414 ZNF276Q8N554 614 aa4.27□□□□□ -1.73
CDKN3-201ENST00000216414 PROKR1Q8TCW9 393 aa4.27□□□□□ -1.73
CDKN3-201ENST00000216414 DLG3Q92796 817 aa4.27□□□□□ -1.73
CDKN3-201ENST00000216414 GMLQ99445 158 aa4.27□□□□□ -1.73
CDKN3-201ENST00000216414 MNTQ99583 582 aa4.27□□□□□ -1.73
CDKN3-201ENST00000216414 DHRS4Q9BTZ2 278 aa4.27□□□□□ -1.73
CDKN3-201ENST00000216414 SLC52A2Q9HAB3 445 aa4.27□□□□□ -1.73
CDKN3-201ENST00000216414 IL23AQ9NPF7 189 aa4.27□□□□□ -1.73
CDKN3-201ENST00000216414 NCDNQ9UBB6 729 aa4.27□□□□□ -1.73
CDKN3-201ENST00000216414 ZNHIT2Q9UHR6 403 aa4.27□□□□□ -1.73
CDKN3-201ENST00000216414 MRPS23Q9Y3D9 190 aaKnown RBP4.27□□□□□ -1.73
CDKN3-201ENST00000216414 KLRG2A4D1S0 409 aaPredicted RBP4.26□□□□□ -1.73
CDKN3-201ENST00000216414 GOLGA6L6A8MZA4 724 aa4.26□□□□□ -1.73
CDKN3-201ENST00000216414 DIAPH1O60610 1272 aaKnown RBP4.26□□□□□ -1.73
CDKN3-201ENST00000216414 MFAP3LO75121 409 aa4.26□□□□□ -1.73
CDKN3-201ENST00000216414 ABHD16AO95870 558 aa4.26□□□□□ -1.73
CDKN3-201ENST00000216414 LMNAP02545 664 aaKnown RBP4.26□□□□□ -1.73
CDKN3-201ENST00000216414 PROZP22891 400 aa4.26□□□□□ -1.73
CDKN3-201ENST00000216414 RGS3P49796 1198 aa4.26□□□□□ -1.73
CDKN3-201ENST00000216414 RABGGTBP53611 331 aa4.26□□□□□ -1.73
CDKN3-201ENST00000216414 ANTXR2P58335 489 aa4.26□□□□□ -1.73
CDKN3-201ENST00000216414 ADAM8P78325 824 aa4.26□□□□□ -1.73
CDKN3-201ENST00000216414 IRF9Q00978 393 aa4.26□□□□□ -1.73
CDKN3-201ENST00000216414 RASGRF1Q13972 1273 aa4.26□□□□□ -1.73
CDKN3-201ENST00000216414 PTPAQ15257 358 aa4.26□□□□□ -1.73
CDKN3-201ENST00000216414 DGKDQ16760 1214 aa4.26□□□□□ -1.73
CDKN3-201ENST00000216414 LY6G5CQ5SRR4 150 aa4.26□□□□□ -1.73
CDKN3-201ENST00000216414 OVCH1Q7RTY7 1134 aa4.26□□□□□ -1.73
CDKN3-201ENST00000216414 RTN4RL1Q86UN2 441 aaPredicted RBP4.26□□□□□ -1.73
CDKN3-201ENST00000216414 CKAP2LQ8IYA6 745 aa4.26□□□□□ -1.73
CDKN3-201ENST00000216414 C2orf69Q8N8R5 385 aa4.26□□□□□ -1.73
CDKN3-201ENST00000216414 SLC43A3Q8NBI5 491 aa4.26□□□□□ -1.73
CDKN3-201ENST00000216414 OR5AN1Q8NGI8 311 aa4.26□□□□□ -1.73
CDKN3-201ENST00000216414 LENG9Q96B70 501 aa4.26□□□□□ -1.73
CDKN3-201ENST00000216414 ARL8AQ96BM9 186 aa4.26□□□□□ -1.73
CDKN3-201ENST00000216414 FOXB1Q99853 325 aa4.26□□□□□ -1.73
CDKN3-201ENST00000216414 MLST8Q9BVC4 326 aa4.26□□□□□ -1.73
CDKN3-201ENST00000216414 CELF4Q9BZC1 486 aaKnown RBP4.26□□□□□ -1.73
CDKN3-201ENST00000216414 RIOX1Q9H6W3 641 aa4.26□□□□□ -1.73
CDKN3-201ENST00000216414 PTGFRNQ9P2B2 879 aa4.26□□□□□ -1.73
CDKN3-201ENST00000216414 MSRB2Q9Y3D2 182 aa4.26□□□□□ -1.73
CDKN3-201ENST00000216414 EFCAB14O75071 495 aa4.25□□□□□ -1.73
CDKN3-201ENST00000216414 KRT37O76014 449 aa4.25□□□□□ -1.73
CDKN3-201ENST00000216414 STK10O94804 968 aaKnown RBP4.25□□□□□ -1.73
CDKN3-201ENST00000216414 IPO13O94829 963 aaKnown RBP4.25□□□□□ -1.73
CDKN3-201ENST00000216414 FBLP22087 321 aaKnown RBP4.25□□□□□ -1.73
CDKN3-201ENST00000216414 SLC6A3Q01959 620 aa4.25□□□□□ -1.73
CDKN3-201ENST00000216414 GAGE13Q4V321 117 aa4.25□□□□□ -1.73
CDKN3-201ENST00000216414 MFSD5Q6N075 450 aa4.25□□□□□ -1.73
CDKN3-201ENST00000216414 KCNV1Q6PIU1 500 aa4.25□□□□□ -1.73
CDKN3-201ENST00000216414 PLA2G15Q8NCC3 412 aa4.25□□□□□ -1.73
CDKN3-201ENST00000216414 FOXRED1Q96CU9 486 aaPredicted RBP4.25□□□□□ -1.73
CDKN3-201ENST00000216414 MAGEB10Q96LZ2 347 aaPredicted RBP4.25□□□□□ -1.73
CDKN3-201ENST00000216414 TRPS1Q9UHF7 1281 aa4.25□□□□□ -1.73
CDKN3-201ENST00000216414 PACSIN3Q9UKS6 424 aa4.25□□□□□ -1.73
CDKN3-201ENST00000216414 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.24□□□□□ -1.73
CDKN3-201ENST00000216414 TOX4O94842 621 aa4.24□□□□□ -1.73
CDKN3-201ENST00000216414 PRLP01236 227 aa4.24□□□□□ -1.73
CDKN3-201ENST00000216414 ROM1Q03395 351 aa4.24□□□□□ -1.73
CDKN3-201ENST00000216414 E2F7Q96AV8 911 aa4.24□□□□□ -1.73
CDKN3-201ENST00000216414 ZNF512Q96ME7 567 aaPredicted RBP4.24□□□□□ -1.73
CDKN3-201ENST00000216414 CCDC113Q9H0I3 377 aa4.24□□□□□ -1.73
CDKN3-201ENST00000216414 POLR3BQ9NW08 1133 aaPredicted RBP4.24□□□□□ -1.73
CDKN3-201ENST00000216414 PPP1R1BQ9UD71 204 aaPredicted RBP4.24□□□□□ -1.73
CDKN3-201ENST00000216414 DNAI1Q9UI46 699 aa4.24□□□□□ -1.73
CDKN3-201ENST00000216414 FZD1Q9UP38 647 aa4.24□□□□□ -1.73
CDKN3-201ENST00000216414 SORCS3Q9UPU3 1222 aa4.24□□□□□ -1.73
CDKN3-201ENST00000216414 SETD1BQ9UPS6 1966 aaKnown RBP4.23□□□□□ -1.73
CDKN3-201ENST00000216414 KDM2BQ8NHM5 1336 aa4.23□□□□□ -1.73
CDKN3-201ENST00000216414 MASP2O00187 686 aa4.23□□□□□ -1.73
CDKN3-201ENST00000216414 DAPK3O43293 454 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms