RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 ECE2O60344 883 aa16.37■□□□□ 0.21
EFNB1-201ENST00000204961 HARSP12081 509 aaKnown RBP16.37■□□□□ 0.21
EFNB1-201ENST00000204961 NPEPPSP55786 919 aa16.37■□□□□ 0.21
EFNB1-201ENST00000204961 C18orf8Q96DM3 657 aa16.37■□□□□ 0.21
EFNB1-201ENST00000204961 GJD4Q96KN9 370 aaPredicted RBP16.37■□□□□ 0.21
EFNB1-201ENST00000204961 CCT8L2Q96SF2 557 aa16.37■□□□□ 0.21
EFNB1-201ENST00000204961 CBWD1Q9BRT8 395 aa16.37■□□□□ 0.21
EFNB1-201ENST00000204961 TAF1DQ9H5J8 278 aaPredicted RBP16.37■□□□□ 0.21
EFNB1-201ENST00000204961 PNMA2Q9UL42 364 aa16.37■□□□□ 0.21
EFNB1-201ENST00000204961 FRMD4BQ9Y2L6 1034 aa16.37■□□□□ 0.21
EFNB1-201ENST00000204961 CD2APQ9Y5K6 639 aa16.37■□□□□ 0.21
EFNB1-201ENST00000204961 CEP350Q5VT06 3117 aa16.37■□□□□ 0.21
EFNB1-201ENST00000204961 GOLGA6L7A0A1B0GV03 622 aa16.37■□□□□ 0.21
EFNB1-201ENST00000204961 ARHGEF35A5YM69 484 aa16.37■□□□□ 0.21
EFNB1-201ENST00000204961 RPL13P26373 211 aaKnown RBP16.37■□□□□ 0.21
EFNB1-201ENST00000204961 CLK2P49760 499 aaKnown RBP16.37■□□□□ 0.21
EFNB1-201ENST00000204961 CPLX4Q7Z7G2 160 aa16.37■□□□□ 0.21
EFNB1-201ENST00000204961 RNF10Q8N5U6 811 aaKnown RBP16.37■□□□□ 0.21
EFNB1-201ENST00000204961 CEP63Q96MT8 703 aa16.37■□□□□ 0.21
EFNB1-201ENST00000204961 PWWP2AQ96N64 755 aa16.37■□□□□ 0.21
EFNB1-201ENST00000204961 PI4K2AQ9BTU6 479 aa16.37■□□□□ 0.21
EFNB1-201ENST00000204961 KCNMB3Q9NPA1 279 aa16.37■□□□□ 0.21
EFNB1-201ENST00000204961 TCRBV7S2A1N4TA0A589 114 aa16.36■□□□□ 0.21
EFNB1-201ENST00000204961 PPP1R12BO60237 982 aaPredicted RBP16.36■□□□□ 0.21
EFNB1-201ENST00000204961 SNHG28P0DPA3 235 aa16.36■□□□□ 0.21
EFNB1-201ENST00000204961 ALAS1P13196 640 aa16.36■□□□□ 0.21
EFNB1-201ENST00000204961 EIF2AK2P19525 551 aaKnown RBP16.36■□□□□ 0.21
EFNB1-201ENST00000204961 QPCTQ16769 361 aa16.36■□□□□ 0.21
EFNB1-201ENST00000204961 PRUNE1Q86TP1 453 aa16.36■□□□□ 0.21
EFNB1-201ENST00000204961 CEP57Q86XR8 500 aa16.36■□□□□ 0.21
EFNB1-201ENST00000204961 SLFN12Q8IYM2 578 aa16.36■□□□□ 0.21
EFNB1-201ENST00000204961 ETNPPLQ8TBG4 499 aa16.36■□□□□ 0.21
EFNB1-201ENST00000204961 TOPORSQ9NS56 1045 aaPredicted RBP16.36■□□□□ 0.21
EFNB1-201ENST00000204961 CNOT8Q9UFF9 292 aaKnown RBP16.36■□□□□ 0.21
EFNB1-201ENST00000204961 PJA2O43164 708 aa16.36■□□□□ 0.21
EFNB1-201ENST00000204961 ECM2O94769 699 aaPredicted RBP16.36■□□□□ 0.21
EFNB1-201ENST00000204961 SLITRK3O94933 977 aa16.36■□□□□ 0.21
EFNB1-201ENST00000204961 RPA1P27694 616 aa16.36■□□□□ 0.21
EFNB1-201ENST00000204961 UAP1Q16222 522 aaPredicted RBP16.36■□□□□ 0.21
EFNB1-201ENST00000204961 PRAMEF18Q5VWM3 479 aa16.36■□□□□ 0.21
EFNB1-201ENST00000204961 PLA2G4FQ68DD2 849 aa16.36■□□□□ 0.21
EFNB1-201ENST00000204961 DHX38Q92620 1227 aaKnown RBP16.36■□□□□ 0.21
EFNB1-201ENST00000204961 EMSYQ7Z589 1322 aa16.36■□□□□ 0.21
EFNB1-201ENST00000204961 STRCQ7RTU9 1775 aa16.36■□□□□ 0.21
EFNB1-201ENST00000204961 SLC16A4O15374 487 aa16.35■□□□□ 0.21
EFNB1-201ENST00000204961 GUCY2CP25092 1073 aa16.35■□□□□ 0.21
EFNB1-201ENST00000204961 EPHA7Q15375 998 aa16.35■□□□□ 0.21
EFNB1-201ENST00000204961 GRIPAP1Q4V328 841 aa16.35■□□□□ 0.21
EFNB1-201ENST00000204961 IQCKQ8N0W5 287 aa16.35■□□□□ 0.21
EFNB1-201ENST00000204961 SYT2Q8N9I0 419 aaPredicted RBP16.35■□□□□ 0.21
EFNB1-201ENST00000204961 ATP6V1G3Q96LB4 118 aa16.35■□□□□ 0.21
EFNB1-201ENST00000204961 TMEM39BQ9GZU3 492 aa16.35■□□□□ 0.21
EFNB1-201ENST00000204961 TBK1Q9UHD2 729 aa16.35■□□□□ 0.21
EFNB1-201ENST00000204961 DBR1Q9UK59 544 aaKnown RBP16.35■□□□□ 0.21
EFNB1-201ENST00000204961 ATF5Q9Y2D1 282 aaPredicted RBP16.35■□□□□ 0.21
EFNB1-201ENST00000204961 ARAP2Q8WZ64 1704 aa16.35■□□□□ 0.21
EFNB1-201ENST00000204961 AFF2P51816 1311 aa16.35■□□□□ 0.21
EFNB1-201ENST00000204961 FTLP02792 175 aaPredicted RBP16.35■□□□□ 0.21
EFNB1-201ENST00000204961 GCFC2P16383 781 aaKnown RBP16.35■□□□□ 0.21
EFNB1-201ENST00000204961 CDR1P51861 262 aa16.35■□□□□ 0.21
EFNB1-201ENST00000204961 COL23A1Q86Y22 540 aaPredicted RBP16.35■□□□□ 0.21
EFNB1-201ENST00000204961 LENG9Q96B70 501 aa16.35■□□□□ 0.21
EFNB1-201ENST00000204961 LXNQ9BS40 222 aa16.35■□□□□ 0.21
EFNB1-201ENST00000204961 PARVGQ9HBI0 331 aa16.35■□□□□ 0.21
EFNB1-201ENST00000204961 GNA14O95837 355 aa16.35■□□□□ 0.21
EFNB1-201ENST00000204961 SF3B2Q13435 895 aaKnown RBP16.35■□□□□ 0.21
EFNB1-201ENST00000204961 ALG3Q92685 438 aa16.35■□□□□ 0.21
EFNB1-201ENST00000204961 ZNF668Q96K58 619 aaPredicted RBP16.35■□□□□ 0.21
EFNB1-201ENST00000204961 SCLT1Q96NL6 688 aa16.35■□□□□ 0.21
EFNB1-201ENST00000204961 HEMGNQ9BXL5 484 aa16.35■□□□□ 0.21
EFNB1-201ENST00000204961 WDR11Q9BZH6 1224 aa16.35■□□□□ 0.21
EFNB1-201ENST00000204961 UTP11Q9Y3A2 253 aaKnown RBP16.35■□□□□ 0.21
EFNB1-201ENST00000204961 NHSL1Q5SYE7 1610 aa16.35■□□□□ 0.21
EFNB1-201ENST00000204961 MYH1P12882 1939 aa16.34■□□□□ 0.21
EFNB1-201ENST00000204961 MYH4Q9Y623 1939 aa16.34■□□□□ 0.21
EFNB1-201ENST00000204961 OPLAHO14841 1288 aa16.34■□□□□ 0.21
EFNB1-201ENST00000204961 SPOPO43791 374 aa16.34■□□□□ 0.21
EFNB1-201ENST00000204961 HIP1RO75146 1068 aa16.34■□□□□ 0.21
EFNB1-201ENST00000204961 KRT5P13647 590 aa16.34■□□□□ 0.21
EFNB1-201ENST00000204961 USP11P51784 963 aa16.34■□□□□ 0.21
EFNB1-201ENST00000204961 MYL7Q01449 175 aa16.34■□□□□ 0.21
EFNB1-201ENST00000204961 SPIRE1Q08AE8 756 aa16.34■□□□□ 0.21
EFNB1-201ENST00000204961 PRKG1Q13976 671 aa16.34■□□□□ 0.21
EFNB1-201ENST00000204961 E2F5Q15329 346 aa16.34■□□□□ 0.21
EFNB1-201ENST00000204961 NLRP14Q86W24 1093 aa16.34■□□□□ 0.21
EFNB1-201ENST00000204961 EFCAB13Q8IY85 973 aa16.34■□□□□ 0.21
EFNB1-201ENST00000204961 ZNF473Q8WTR7 871 aaKnown RBP16.34■□□□□ 0.21
EFNB1-201ENST00000204961 C1orf54Q8WWF1 131 aa16.34■□□□□ 0.21
EFNB1-201ENST00000204961 QTRT2Q9H974 415 aaKnown RBP16.34■□□□□ 0.21
EFNB1-201ENST00000204961 TYW1Q9NV66 732 aaKnown RBP16.34■□□□□ 0.21
EFNB1-201ENST00000204961 SWAP70Q9UH65 585 aa16.34■□□□□ 0.21
EFNB1-201ENST00000204961 COL14A1Q05707 1796 aaKnown RBP16.34■□□□□ 0.21
EFNB1-201ENST00000204961 CYP26A1O43174 497 aa16.34■□□□□ 0.21
EFNB1-201ENST00000204961 PPIP5K2O43314 1243 aa16.34■□□□□ 0.21
EFNB1-201ENST00000204961 ACSL3O95573 720 aa16.34■□□□□ 0.21
EFNB1-201ENST00000204961 PSMC2P35998 433 aaKnown RBP16.34■□□□□ 0.21
EFNB1-201ENST00000204961 FMO5P49326 533 aa16.34■□□□□ 0.21
EFNB1-201ENST00000204961 PEX3P56589 373 aa16.34■□□□□ 0.21
EFNB1-201ENST00000204961 TNIP1Q15025 636 aa16.34■□□□□ 0.21
EFNB1-201ENST00000204961 SPRED3Q2MJR0 410 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms