RNA–Protein interactions for RNA: ENST00000173898.11

TRO-201, Transcript of trophinin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRO, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-201ENST00000173898 PLS3P13797 630 aa12.88□□□□□ -0.35
TRO-201ENST00000173898 USP11P51784 963 aa12.88□□□□□ -0.35
TRO-201ENST00000173898 MAGOHP61326 146 aaKnown RBP12.88□□□□□ -0.35
TRO-201ENST00000173898 GPSM2P81274 684 aa12.88□□□□□ -0.35
TRO-201ENST00000173898 MAPK6Q16659 721 aa12.88□□□□□ -0.35
TRO-201ENST00000173898 ABI1Q8IZP0 508 aa12.88□□□□□ -0.35
TRO-201ENST00000173898 SPATA4Q8NEY3 305 aa12.88□□□□□ -0.35
TRO-201ENST00000173898 HSPH1Q92598 858 aa12.88□□□□□ -0.35
TRO-201ENST00000173898 PHF20Q9BVI0 1012 aa12.88□□□□□ -0.35
TRO-201ENST00000173898 LUC7L3O95232 432 aaKnown RBP12.88□□□□□ -0.35
TRO-201ENST00000173898 NFIXQ14938 502 aa12.88□□□□□ -0.35
TRO-201ENST00000173898 BBS5Q8N3I7 341 aa12.88□□□□□ -0.35
TRO-201ENST00000173898 RNF25Q96BH1 459 aaPredicted RBP12.88□□□□□ -0.35
TRO-201ENST00000173898 FAM49AQ9H0Q0 323 aaPredicted RBP12.88□□□□□ -0.35
TRO-201ENST00000173898 LIMA1Q9UHB6 759 aaKnown RBP12.88□□□□□ -0.35
TRO-201ENST00000173898 USH1CQ9Y6N9 552 aa12.88□□□□□ -0.35
TRO-201ENST00000173898 ZHX2Q9Y6X8 837 aa12.88□□□□□ -0.35
TRO-201ENST00000173898 ERCC6L2Q5T890 1561 aa12.88□□□□□ -0.35
TRO-201ENST00000173898 ECE2O60344 883 aa12.88□□□□□ -0.35
TRO-201ENST00000173898 FXR1P51114 621 aaKnown RBP eCLIP12.88□□□□□ -0.35
TRO-201ENST00000173898 SPP2Q13103 211 aa12.88□□□□□ -0.35
TRO-201ENST00000173898 FAM47EQ6ZV65 393 aa12.88□□□□□ -0.35
TRO-201ENST00000173898 SMIM5Q71RC9 77 aa12.88□□□□□ -0.35
TRO-201ENST00000173898 OR6B3Q8NGW1 331 aa12.88□□□□□ -0.35
TRO-201ENST00000173898 SKA2Q8WVK7 121 aaPredicted RBP12.88□□□□□ -0.35
TRO-201ENST00000173898 CFAP36Q96G28 342 aa12.88□□□□□ -0.35
TRO-201ENST00000173898 TUBE1Q9UJT0 475 aa12.88□□□□□ -0.35
TRO-201ENST00000173898 G3BP2Q9UN86 482 aaKnown RBP12.88□□□□□ -0.35
TRO-201ENST00000173898 CDC42BPAQ5VT25 1732 aa12.88□□□□□ -0.35
TRO-201ENST00000173898 ADRA2BP18089 450 aa12.87□□□□□ -0.35
TRO-201ENST00000173898 VSNL1P62760 191 aa12.87□□□□□ -0.35
TRO-201ENST00000173898 STXBP2Q15833 593 aa12.87□□□□□ -0.35
TRO-201ENST00000173898 MYLK4Q86YV6 388 aaPredicted RBP12.87□□□□□ -0.35
TRO-201ENST00000173898 SRRM1Q8IYB3 904 aaKnown RBP12.87□□□□□ -0.35
TRO-201ENST00000173898 ADSSL1Q8N142 457 aa12.87□□□□□ -0.35
TRO-201ENST00000173898 NSUN6Q8TEA1 469 aaKnown RBP12.87□□□□□ -0.35
TRO-201ENST00000173898 RBM41Q96IZ5 413 aaKnown RBP12.87□□□□□ -0.35
TRO-201ENST00000173898 LXNQ9BS40 222 aa12.87□□□□□ -0.35
TRO-201ENST00000173898 EDEM3Q9BZQ6 932 aa12.87□□□□□ -0.35
TRO-201ENST00000173898 SENP2Q9HC62 589 aa12.87□□□□□ -0.35
TRO-201ENST00000173898 RNF146Q9NTX7 359 aa12.87□□□□□ -0.35
TRO-201ENST00000173898 TTC7AQ9ULT0 858 aaPredicted RBP12.87□□□□□ -0.35
TRO-201ENST00000173898 RASA4BC9J798 803 aa12.87□□□□□ -0.35
TRO-201ENST00000173898 RASA4O43374 803 aa12.87□□□□□ -0.35
TRO-201ENST00000173898 CSF1RP07333 972 aa12.87□□□□□ -0.35
TRO-201ENST00000173898 ESRRAP11474 423 aaPredicted RBP12.87□□□□□ -0.35
TRO-201ENST00000173898 RXRBP28702 533 aa12.87□□□□□ -0.35
TRO-201ENST00000173898 E2F4Q16254 413 aa12.87□□□□□ -0.35
TRO-201ENST00000173898 SNRNP48Q6IEG0 339 aaKnown RBP12.87□□□□□ -0.35
TRO-201ENST00000173898 ARMCX2Q7L311 632 aa12.87□□□□□ -0.35
TRO-201ENST00000173898 METTL23Q86XA0 190 aa12.87□□□□□ -0.35
TRO-201ENST00000173898 ZNF564Q8TBZ8 553 aaPredicted RBP12.87□□□□□ -0.35
TRO-201ENST00000173898 EIF2AK1Q9BQI3 630 aaKnown RBP12.87□□□□□ -0.35
TRO-201ENST00000173898 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.87□□□□□ -0.355e-9■□□□□ 9.6
TRO-201ENST00000173898 FEM1BQ9UK73 627 aa12.87□□□□□ -0.35
TRO-201ENST00000173898 ATF5Q9Y2D1 282 aaPredicted RBP12.87□□□□□ -0.35
TRO-201ENST00000173898 IQANK1A0A1B0GTG1 560 aa12.87□□□□□ -0.35
TRO-201ENST00000173898 PDIA5Q14554 519 aa12.87□□□□□ -0.35
TRO-201ENST00000173898 DALRD3Q5D0E6 543 aaKnown RBP12.87□□□□□ -0.35
TRO-201ENST00000173898 PDXDC1Q6P996 788 aa12.87□□□□□ -0.35
TRO-201ENST00000173898 COG1Q8WTW3 980 aa12.87□□□□□ -0.35
TRO-201ENST00000173898 PPWD1Q96BP3 646 aaKnown RBP12.87□□□□□ -0.35
TRO-201ENST00000173898 SAAL1Q96ER3 474 aa12.87□□□□□ -0.35
TRO-201ENST00000173898 INTS2Q9H0H0 1204 aaKnown RBP12.87□□□□□ -0.35
TRO-201ENST00000173898 KRT39Q6A163 491 aa12.87□□□□□ -0.35
TRO-201ENST00000173898 CATSPER4Q7RTX7 472 aa12.87□□□□□ -0.35
TRO-201ENST00000173898 PRPF38AQ8NAV1 312 aaKnown RBP12.87□□□□□ -0.35
TRO-201ENST00000173898 RGL1Q9NZL6 768 aa12.87□□□□□ -0.35
TRO-201ENST00000173898 BAG5Q9UL15 447 aa12.87□□□□□ -0.35
TRO-201ENST00000173898 TULP4Q9NRJ4 1543 aa12.87□□□□□ -0.35
TRO-201ENST00000173898 A0A0G2JLW4 131 aa12.86□□□□□ -0.35
TRO-201ENST00000173898 KRT37O76014 449 aa12.86□□□□□ -0.35
TRO-201ENST00000173898 STX1BP61266 288 aa12.86□□□□□ -0.35
TRO-201ENST00000173898 SATB1Q01826 763 aa12.86□□□□□ -0.35
TRO-201ENST00000173898 STK4Q13043 487 aa12.86□□□□□ -0.35
TRO-201ENST00000173898 SPOPLQ6IQ16 392 aa12.86□□□□□ -0.35
TRO-201ENST00000173898 MAML1Q92585 1016 aa12.86□□□□□ -0.35
TRO-201ENST00000173898 NUP85Q9BW27 656 aa12.86□□□□□ -0.35
TRO-201ENST00000173898 TAF1DQ9H5J8 278 aaPredicted RBP12.86□□□□□ -0.35
TRO-201ENST00000173898 GABBR1Q9UBS5 961 aa12.86□□□□□ -0.35
TRO-201ENST00000173898 FNDC3AQ9Y2H6 1198 aaKnown RBP12.86□□□□□ -0.35
TRO-201ENST00000173898 FIS1Q9Y3D6 152 aa12.86□□□□□ -0.35
TRO-201ENST00000173898 MORC2Q9Y6X9 1032 aaPredicted RBP12.86□□□□□ -0.35
TRO-201ENST00000173898 CTDNEP1O95476 244 aa12.86□□□□□ -0.35
TRO-201ENST00000173898 KCNJ6P48051 423 aa12.86□□□□□ -0.35
TRO-201ENST00000173898 ARL4CP56559 192 aa12.86□□□□□ -0.35
TRO-201ENST00000173898 HDLBPQ00341 1268 aaKnown RBP12.86□□□□□ -0.35
TRO-201ENST00000173898 NFX1Q12986 1120 aaKnown RBP12.86□□□□□ -0.35
TRO-201ENST00000173898 SPARCL1Q14515 664 aa12.86□□□□□ -0.35
TRO-201ENST00000173898 SWSAP1Q6NVH7 229 aa12.86□□□□□ -0.35
TRO-201ENST00000173898 TTC17Q96AE7 1141 aa12.86□□□□□ -0.35
TRO-201ENST00000173898 LRGUKQ96M69 825 aa12.86□□□□□ -0.35
TRO-201ENST00000173898 MLXIPLQ9NP71 852 aa12.86□□□□□ -0.35
TRO-201ENST00000173898 DPYDQ12882 1025 aa12.86□□□□□ -0.35
TRO-201ENST00000173898 TFDP2Q14188 446 aa12.86□□□□□ -0.35
TRO-201ENST00000173898 SLC27A3Q5K4L6 730 aa12.86□□□□□ -0.35
TRO-201ENST00000173898 ATP6V1E2Q96A05 226 aa12.86□□□□□ -0.35
TRO-201ENST00000173898 FAF2Q96CS3 445 aa12.86□□□□□ -0.35
TRO-201ENST00000173898 WRNIP1Q96S55 665 aa12.86□□□□□ -0.35
TRO-201ENST00000173898 MYCBPQ99417 103 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms