RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 SLU7O95391 586 aaKnown RBP15.68■□□□□ 0.1
RTFDC1-201ENST00000023939 GJA5P36382 358 aa15.68■□□□□ 0.1
RTFDC1-201ENST00000023939 PLA2G4FQ68DD2 849 aa15.68■□□□□ 0.1
RTFDC1-201ENST00000023939 CCDC60Q8IWA6 550 aaPredicted RBP15.68■□□□□ 0.1
RTFDC1-201ENST00000023939 SYCP3Q8IZU3 236 aa15.68■□□□□ 0.1
RTFDC1-201ENST00000023939 MCPH1Q8NEM0 835 aa15.68■□□□□ 0.1
RTFDC1-201ENST00000023939 ERO1AQ96HE7 468 aa15.68■□□□□ 0.1
RTFDC1-201ENST00000023939 MPHOSPH6Q99547 160 aaKnown RBP15.68■□□□□ 0.1
RTFDC1-201ENST00000023939 PAGR1Q9BTK6 254 aa15.68■□□□□ 0.1
RTFDC1-201ENST00000023939 MROH8Q9H579 483 aa15.68■□□□□ 0.1
RTFDC1-201ENST00000023939 TXNRD2Q9NNW7 524 aa15.68■□□□□ 0.1
RTFDC1-201ENST00000023939 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.68■□□□□ 0.1
RTFDC1-201ENST00000023939 ARHGAP20Q9P2F6 1191 aa15.68■□□□□ 0.1
RTFDC1-201ENST00000023939 SLC45A1Q9Y2W3 748 aa15.68■□□□□ 0.1
RTFDC1-201ENST00000023939 MAFBQ9Y5Q3 323 aaPredicted RBP15.68■□□□□ 0.1
RTFDC1-201ENST00000023939 SYNGAP1Q96PV0 1343 aa15.68■□□□□ 0.1
RTFDC1-201ENST00000023939 A0A0U1RQJ8 604 aa15.68■□□□□ 0.1
RTFDC1-201ENST00000023939 IPO7O95373 1038 aaKnown RBP15.68■□□□□ 0.1
RTFDC1-201ENST00000023939 FKBP1BP68106 108 aa15.68■□□□□ 0.1
RTFDC1-201ENST00000023939 PRKCEQ02156 737 aa15.68■□□□□ 0.1
RTFDC1-201ENST00000023939 FSTL1Q12841 308 aa15.68■□□□□ 0.1
RTFDC1-201ENST00000023939 KSR1Q8IVT5 923 aa15.68■□□□□ 0.1
RTFDC1-201ENST00000023939 ATRIPQ8WXE1 791 aa15.68■□□□□ 0.1
RTFDC1-201ENST00000023939 SLC10A4Q96EP9 437 aa15.68■□□□□ 0.1
RTFDC1-201ENST00000023939 CEP170P1Q96L14 293 aa15.68■□□□□ 0.1
RTFDC1-201ENST00000023939 CCDC42Q96M95 316 aa15.68■□□□□ 0.1
RTFDC1-201ENST00000023939 AIPL1Q9NZN9 384 aa15.68■□□□□ 0.1
RTFDC1-201ENST00000023939 KCNG1Q9UIX4 513 aa15.68■□□□□ 0.1
RTFDC1-201ENST00000023939 DAAM1Q9Y4D1 1078 aa15.68■□□□□ 0.1
RTFDC1-201ENST00000023939 WDR81Q562E7 1941 aa15.67■□□□□ 0.1
RTFDC1-201ENST00000023939 SCP2P22307 547 aa15.67■□□□□ 0.1
RTFDC1-201ENST00000023939 PON1P27169 355 aa15.67■□□□□ 0.1
RTFDC1-201ENST00000023939 ABCD1P33897 745 aa15.67■□□□□ 0.1
RTFDC1-201ENST00000023939 SMTNP53814 917 aa15.67■□□□□ 0.1
RTFDC1-201ENST00000023939 TUBB2AQ13885 445 aa15.67■□□□□ 0.1
RTFDC1-201ENST00000023939 NEDD9Q14511 834 aa15.67■□□□□ 0.1
RTFDC1-201ENST00000023939 EXOC3L4Q17RC7 722 aa15.67■□□□□ 0.1
RTFDC1-201ENST00000023939 ASTE1Q2TB18 679 aaPredicted RBP15.67■□□□□ 0.1
RTFDC1-201ENST00000023939 SFMBT2Q5VUG0 894 aa15.67■□□□□ 0.1
RTFDC1-201ENST00000023939 HGSNATQ68CP4 663 aa15.67■□□□□ 0.1
RTFDC1-201ENST00000023939 KCNV1Q6PIU1 500 aa15.67■□□□□ 0.1
RTFDC1-201ENST00000023939 GBP6Q6ZN66 633 aa15.67■□□□□ 0.1
RTFDC1-201ENST00000023939 MAEAQ7L5Y9 396 aa15.67■□□□□ 0.1
RTFDC1-201ENST00000023939 MORC4Q8TE76 937 aa15.67■□□□□ 0.1
RTFDC1-201ENST00000023939 TUBB2BQ9BVA1 445 aa15.67■□□□□ 0.1
RTFDC1-201ENST00000023939 IKZF4Q9H2S9 585 aa15.67■□□□□ 0.1
RTFDC1-201ENST00000023939 CYP26B1Q9NR63 512 aa15.67■□□□□ 0.1
RTFDC1-201ENST00000023939 PNMA3Q9UL41 463 aa15.67■□□□□ 0.1
RTFDC1-201ENST00000023939 EXOC7Q9UPT5 735 aa15.67■□□□□ 0.1
RTFDC1-201ENST00000023939 LRRC37A2A6NM11 1700 aa15.67■□□□□ 0.1
RTFDC1-201ENST00000023939 UBA1P22314 1058 aaKnown RBP15.66■□□□□ 0.1
RTFDC1-201ENST00000023939 NPTX2P47972 431 aa15.66■□□□□ 0.1
RTFDC1-201ENST00000023939 PEX3P56589 373 aa15.66■□□□□ 0.1
RTFDC1-201ENST00000023939 POLR2FP61218 127 aaKnown RBP15.66■□□□□ 0.1
RTFDC1-201ENST00000023939 DMP1Q13316 513 aaPredicted RBP15.66■□□□□ 0.1
RTFDC1-201ENST00000023939 FAM102BQ5T8I3 360 aa15.66■□□□□ 0.1
RTFDC1-201ENST00000023939 KLHDC7AQ5VTJ3 777 aa15.66■□□□□ 0.1
RTFDC1-201ENST00000023939 TMEM161BQ8NDZ6 487 aa15.66■□□□□ 0.1
RTFDC1-201ENST00000023939 FGD4Q96M96 766 aa15.66■□□□□ 0.1
RTFDC1-201ENST00000023939 CRACR2AQ9BSW2 395 aa15.66■□□□□ 0.1
RTFDC1-201ENST00000023939 NIFKQ9BYG3 293 aaKnown RBP15.66■□□□□ 0.1
RTFDC1-201ENST00000023939 GPRC5CQ9NQ84 441 aa15.66■□□□□ 0.1
RTFDC1-201ENST00000023939 ZNF215Q9UL58 517 aaPredicted RBP15.66■□□□□ 0.1
RTFDC1-201ENST00000023939 TELO2Q9Y4R8 837 aa15.66■□□□□ 0.1
RTFDC1-201ENST00000023939 ARID2Q68CP9 1835 aa15.66■□□□□ 0.1
RTFDC1-201ENST00000023939 RBAK-RBAKDNI3L0D1 243 aa15.65■□□□□ 0.1
RTFDC1-201ENST00000023939 FARP2O94887 1054 aaPredicted RBP15.65■□□□□ 0.1
RTFDC1-201ENST00000023939 SERPING1P05155 500 aa15.65■□□□□ 0.1
RTFDC1-201ENST00000023939 VAV2P52735 878 aa15.65■□□□□ 0.1
RTFDC1-201ENST00000023939 KCTD2Q14681 263 aa15.65■□□□□ 0.1
RTFDC1-201ENST00000023939 SPA17Q15506 151 aa15.65■□□□□ 0.1
RTFDC1-201ENST00000023939 Q3C1V9 767 aa15.65■□□□□ 0.1
RTFDC1-201ENST00000023939 DCAF17Q5H9S7 520 aaPredicted RBP15.65■□□□□ 0.1
RTFDC1-201ENST00000023939 SEPT14Q6ZU15 432 aa15.65■□□□□ 0.1
RTFDC1-201ENST00000023939 CYFIP1Q7L576 1253 aa15.65■□□□□ 0.1
RTFDC1-201ENST00000023939 MAP4K3Q8IVH8 894 aa15.65■□□□□ 0.1
RTFDC1-201ENST00000023939 EHBP1Q8NDI1 1231 aa15.65■□□□□ 0.1
RTFDC1-201ENST00000023939 IRX2Q9BZI1 471 aaPredicted RBP15.65■□□□□ 0.1
RTFDC1-201ENST00000023939 ATP6V0A4Q9HBG4 840 aa15.65■□□□□ 0.1
RTFDC1-201ENST00000023939 XPNPEP1Q9NQW7 623 aa15.65■□□□□ 0.1
RTFDC1-201ENST00000023939 ZNF302Q9NR11 478 aa15.65■□□□□ 0.1
RTFDC1-201ENST00000023939 H0YCG3 227 aa15.65■□□□□ 0.1
RTFDC1-201ENST00000023939 SLC16A4O15374 487 aa15.65■□□□□ 0.1
RTFDC1-201ENST00000023939 KRT86O43790 486 aa15.65■□□□□ 0.1
RTFDC1-201ENST00000023939 TLR2O60603 784 aa15.65■□□□□ 0.1
RTFDC1-201ENST00000023939 EXOC3O60645 756 aa15.65■□□□□ 0.1
RTFDC1-201ENST00000023939 URI1O94763 535 aaPredicted RBP15.65■□□□□ 0.1
RTFDC1-201ENST00000023939 UCHL3P15374 230 aa15.65■□□□□ 0.1
RTFDC1-201ENST00000023939 EIF4A3P38919 411 aaKnown RBP15.65■□□□□ 0.1
RTFDC1-201ENST00000023939 CYP2J2P51589 502 aa15.65■□□□□ 0.1
RTFDC1-201ENST00000023939 KIF11P52732 1056 aa15.65■□□□□ 0.1
RTFDC1-201ENST00000023939 SLC9C1Q4G0N8 1177 aa15.65■□□□□ 0.1
RTFDC1-201ENST00000023939 ZNF569Q5MCW4 686 aa15.65■□□□□ 0.1
RTFDC1-201ENST00000023939 TCERG1LQ5VWI1 586 aa15.65■□□□□ 0.1
RTFDC1-201ENST00000023939 METTL7BQ6UX53 244 aa15.65■□□□□ 0.1
RTFDC1-201ENST00000023939 INTS8Q75QN2 995 aaKnown RBP15.65■□□□□ 0.1
RTFDC1-201ENST00000023939 AFAP1L1Q8TED9 768 aa15.65■□□□□ 0.1
RTFDC1-201ENST00000023939 ANKRD7Q92527 254 aa15.65■□□□□ 0.1
RTFDC1-201ENST00000023939 MMP19Q99542 508 aa15.65■□□□□ 0.1
RTFDC1-201ENST00000023939 SH2D3AQ9BRG2 576 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms