RNA–Protein interactions for RNA: ENSMUST00000100063.8

Scn9a-201, Transcript of Sodium channel protein type 9 subunit alpha, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Scn9a, Length 9,813 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9a-201ENSMUST00000100063 Polr3fQ921X6 316 aa11.1□□□□□ -0.63
Scn9a-201ENSMUST00000100063 LrgukQ9D5S7 820 aa11.1□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Ehd4Q9EQP2 541 aa11.1□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Arhgap33Q80YF9 1305 aa11.1□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Plch2A2AP18 1501 aa11.1□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Zhx1P70121 873 aa11.1□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Tbx1P70323 479 aa11.1□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Creb3l3Q91XE9 479 aa11.1□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Dpf1Q9QX66 387 aa11.1□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Plekhg1F6S200 1446 aa11.1□□□□□ -0.63
Scn9a-201ENSMUST00000100063 NeblQ0II04 452 aa11.1□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Armc12Q80X86 340 aa11.1□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Rpn1Q91YQ5 608 aaKnown RBP11.1□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Tekt1Q9DAJ2 418 aa11.1□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Copb1Q9JIF7 953 aa11.1□□□□□ -0.63
Scn9a-201ENSMUST00000100063 JrklB2RRL2 523 aa11.09□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Vps33bP59016 617 aa11.09□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Cnot10Q8BH15 744 aa11.09□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Sik3Q6P4S6 1311 aa11.09□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Olfr1354E9Q5G9 310 aa11.09□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Pcsk1P63239 753 aa11.09□□□□□ -0.63
Scn9a-201ENSMUST00000100063 G3bp2P97379 482 aaKnown RBP11.09□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Nlrp4eQ66X19 978 aa11.09□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Gucy2gQ6TL19 1100 aa11.09□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Elp3Q9CZX0 547 aa11.09□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Akr1b1P45376 316 aa11.09□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Rcor2Q8C796 523 aa11.09□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Parp9Q8CAS9 866 aa11.09□□□□□ -0.63
Scn9a-201ENSMUST00000100063 PlvapQ91VC4 438 aa11.09□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Cdca7lQ922M5 438 aa11.09□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Klhl35Q9CZ49 574 aa11.09□□□□□ -0.63
Scn9a-201ENSMUST00000100063 CntrlA2AL36 2334 aa11.09□□□□□ -0.63
Scn9a-201ENSMUST00000100063 March10E9PX79 788 aa11.09□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Capn2O08529 700 aa11.09□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Tp53bp2Q8CG79 1128 aa11.09□□□□□ -0.63
Scn9a-201ENSMUST00000100063 2610008E11RikG3X964 669 aa11.09□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Snap23O09044 210 aa11.09□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Vps4bP46467 444 aaKnown RBP11.09□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Snap25P60879 206 aa11.09□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Sult1d1Q3UZZ6 295 aa11.09□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Klhl11Q8CE33 709 aa11.09□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Pls3Q99K51 630 aa11.09□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Celf2Q9Z0H4 508 aaKnown RBP11.09□□□□□ -0.63
Scn9a-201ENSMUST00000100063 HunkO88866 714 aa11.09□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Gm13103Q4VAD2 491 aa11.09□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Pla2g4cQ64GA5 597 aa11.09□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Olfr67F8VPJ8 320 aa11.09□□□□□ -0.63
Scn9a-201ENSMUST00000100063 RetsatQ64FW2 609 aa11.09□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Atg4a-psA0A0G2JFS9 396 aa11.09□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Catsper2A2ARP9 588 aa11.09□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Proca1B0QZF7 307 aa11.09□□□□□ -0.63
Scn9a-201ENSMUST00000100063 PolgP54099 1218 aa11.09□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Cog5Q8C0L8 829 aa11.09□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Atg4aQ8C9S8 396 aa11.09□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Nup85Q8R480 656 aaKnown RBP11.09□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Vwa5aQ99KC8 793 aaKnown RBP11.09□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Pole3Q9JKP7 145 aa11.09□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Osbpl10S4R1M9 766 aa11.09□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Rhox3fA2ANE1 215 aa11.08□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Trim36Q80WG7 729 aa11.08□□□□□ -0.64
Scn9a-201ENSMUST00000100063 SgczQ8BX51 311 aa11.08□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Nde1Q9CZA6 344 aa11.08□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Sapcd2Q9D818 391 aa11.08□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Slc12a7Q9WVL3 1083 aa11.08□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Gm28042B7ZCM9 1014 aa11.08□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Pla2g4bP0C871 782 aa11.08□□□□□ -0.64
Scn9a-201ENSMUST00000100063 GabrdP22933 449 aa11.08□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Usp10P52479 792 aaKnown RBP11.08□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Zbtb17Q60821 794 aa11.08□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Atp1a1Q8VDN2 1023 aaKnown RBP11.08□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Desi2Q9D291 194 aa11.08□□□□□ -0.64
Scn9a-201ENSMUST00000100063 PigbQ9JJQ0 542 aa11.08□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Kcnb1Q03717 857 aa11.08□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Runx2Q08775 607 aa11.08□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Abcg8Q9DBM0 673 aa11.08□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Ism1A2ATD1 454 aa11.08□□□□□ -0.64
Scn9a-201ENSMUST00000100063 E2f6O54917 272 aa11.08□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Alppl2P24823 529 aa11.08□□□□□ -0.64
Scn9a-201ENSMUST00000100063 U2af2P26369 475 aaKnown RBP11.08□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Flot2Q60634 428 aaKnown RBP11.08□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Lrrc41Q8K1C9 807 aa11.08□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Taf11Q99JX1 211 aa11.08□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Tssc4Q9JHE7 317 aa11.08□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Cst8P32766 142 aa11.08□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Ankrd2Q9WV06 328 aa11.08□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Suclg2Q9Z2I8 433 aa11.08□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Cdk13Q69ZA1 1511 aaKnown RBP11.08□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Gm5152L7N200 190 aa11.08□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Slc2a4P14142 509 aa11.08□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Afg1lQ3V384 480 aa11.08□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Phf21aQ6ZPK0 659 aa11.08□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Gucy1b2Q8BXH3 824 aa11.08□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Cyp2c50Q91X77 490 aa11.08□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Catsper1Q91ZR5 686 aa11.08□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Wars2Q9CYK1 360 aa11.08□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Fam122aQ9DB52 284 aa11.08□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Sept5Q9Z2Q6 369 aa11.08□□□□□ -0.64
Scn9a-201ENSMUST00000100063 A0A286YCQ6 122 aa11.08□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Krt78E9Q0F0 1068 aa11.08□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Gm8897L7N294 181 aa11.08□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 23.3 ms