RNA–Protein interactions for RNA: ENSMUST00000071057.13

Ddx55-201, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx55, Length 2,799 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-201ENSMUST00000071057 Pgrmc2Q80UU9 217 aaKnown RBP12.32□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Cog5Q8C0L8 829 aa12.32□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Pex19Q8VCI5 299 aa12.32□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Gbp7Q91Z40 638 aa12.32□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Ndfip2Q91ZP6 311 aa12.32□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Ppp1r3aQ99MR9 1089 aa12.32□□□□□ -0.44
Ddx55-201ENSMUST00000071057 1700020D05RikQ99PB1 294 aa12.32□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Cabp5Q9JLK3 173 aa12.32□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Msh5Q9QUM7 833 aa12.32□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Flot1O08917 428 aa12.32□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Nrg3O35181 713 aa12.32□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Lrrc4bP0C192 709 aa12.32□□□□□ -0.44
Ddx55-201ENSMUST00000071057 RalgdsQ03385 852 aa12.32□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Tnfaip8l3Q3TBL6 204 aa12.32□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Ogfod1Q3U0K8 545 aa12.32□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Chtf18Q8BIW9 969 aa12.32□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Camkk2Q8C078 588 aa12.32□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Rsrc1Q9DBU6 334 aa12.32□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Trp53inp1Q9QXE4 239 aa12.32□□□□□ -0.44
Ddx55-201ENSMUST00000071057 CenphQ9QYM8 241 aa12.32□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Eya4Q9Z191 616 aa12.32□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Usp31E9Q6Y8 1344 aa12.32□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Clip3B9EHT4 547 aa12.31□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Gm15448F6PZL4 682 aa12.31□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Zfp275G3X904 499 aa12.31□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Kcnh2O35219 1162 aa12.31□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Idh1O88844 414 aaKnown RBP12.31□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Epb41l4aP52963 686 aa12.31□□□□□ -0.44
Ddx55-201ENSMUST00000071057 MamstrQ0ZCJ7 421 aa12.31□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Eepd1Q3TGW2 569 aa12.31□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Ddx3yQ62095 658 aaKnown RBP12.31□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Antxr2Q6DFX2 487 aa12.31□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Cep70Q6IQY5 616 aa12.31□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Mettl25Q6NXH8 597 aa12.31□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Actn1Q7TPR4 892 aaKnown RBP12.31□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Drd5Q8BLD9 478 aa12.31□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Lman1lQ8VCD3 505 aa12.31□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Klhl20Q8VCK5 604 aa12.31□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Ttc1Q91Z38 292 aa12.31□□□□□ -0.44
Ddx55-201ENSMUST00000071057 NkapQ9D0F4 415 aaKnown RBP12.31□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Ccdc130Q9D516 385 aa12.31□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Kif9Q9WV04 790 aa12.31□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Psma7Q9Z2U0 248 aa12.31□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Trappc11B2RXC1 1133 aa12.31□□□□□ -0.44
Ddx55-201ENSMUST00000071057 ThbdP15306 577 aa12.31□□□□□ -0.44
Ddx55-201ENSMUST00000071057 GmpsQ3THK7 693 aa12.31□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Znhit6Q3UFB2 460 aaKnown RBP12.31□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Nutm2Q3V0C3 733 aa12.31□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Serpinb6Q60854 378 aa12.31□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Cct6bQ61390 531 aa12.31□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Pank4Q80YV4 820 aa12.31□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Cyp26b1Q811W2 512 aa12.31□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Nemp2Q8CB65 421 aa12.31□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Kcnv2Q8CFS6 562 aa12.31□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Adcy3Q8VHH7 1145 aa12.31□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Med24Q99K74 987 aa12.31□□□□□ -0.44
Ddx55-201ENSMUST00000071057 PlgrktQ9D3P8 147 aa12.31□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Rnf138rt1Q9D9M9 248 aa12.31□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Oip5A2AQ14 241 aa12.3□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Glt1d1A4FUP9 346 aa12.3□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Gm42641I6L9G2 585 aa12.3□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Enc1O35709 589 aa12.3□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Rpl13P47963 211 aaKnown RBP12.3□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Etv6P97360 485 aa12.3□□□□□ -0.44
Ddx55-201ENSMUST00000071057 LbrQ3U9G9 626 aaKnown RBP12.3□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Rsad1Q5SUV1 442 aa12.3□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Fgfr1opQ66JX5 399 aa12.3□□□□□ -0.44
Ddx55-201ENSMUST00000071057 BegainQ68EF6 600 aa12.3□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Maip1Q8BHE8 291 aa12.3□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Phf20Q8BLG0 1010 aaKnown RBP12.3□□□□□ -0.44
Ddx55-201ENSMUST00000071057 AtripQ8BMG1 785 aa12.3□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Kif2bQ8C0N1 668 aa12.3□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Tbc1d10cQ8C9V1 444 aa12.3□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Pacs1Q8K212 961 aa12.3□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Arhgef25Q9CWR0 618 aa12.3□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Zcchc8Q9CYA6 709 aaKnown RBP12.3□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Kcnh7Q9ER47 1195 aa12.3□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Ddx25Q9QY15 484 aa12.3□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Gabbr1Q9WV18 960 aa12.3□□□□□ -0.44
Ddx55-201ENSMUST00000071057 DohhA0A1Y7VJ29 135 aa12.3□□□□□ -0.44
Ddx55-201ENSMUST00000071057 1700016G14RikA0A286YCZ6 238 aa12.3□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Klhdc7aA2APT9 773 aa12.3□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Speer2E9Q9U2 264 aa12.3□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Gfpt1P47856 697 aa12.3□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Capza3P70190 299 aa12.3□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Zc3h18Q0P678 948 aaKnown RBP12.3□□□□□ -0.44
Ddx55-201ENSMUST00000071057 SlmapQ3URD3 845 aa12.3□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Gm5169Q5M8P2 212 aa12.3□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Ccdc42Q5SV66 316 aa12.3□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Ppp2r5cQ60996 524 aa12.3□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Rgl2Q61193 778 aa12.3□□□□□ -0.44
Ddx55-201ENSMUST00000071057 WhrnQ80VW5 918 aa12.3□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Hirip3Q8BLH7 601 aa12.3□□□□□ -0.44
Ddx55-201ENSMUST00000071057 PreplQ8C167 725 aa12.3□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Vcpip1Q8CDG3 1220 aa12.3□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Dnajc17Q91WT4 303 aa12.3□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Creb3l3Q91XE9 479 aa12.3□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Tdrd1Q99MV1 1172 aa12.3□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Ribc1Q9D0B8 379 aa12.3□□□□□ -0.44
Ddx55-201ENSMUST00000071057 P4hbP09103 509 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 52.2 ms