RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 TyrobpO54885 114 aa8.93□□□□□ -0.98
Cdc40-201ENSMUST00000044166 PigrO70570 771 aa8.93□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Tagap1P0CAX8 505 aa8.93□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Cbx3P23198 183 aaKnown RBP8.93□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Dpcr1Q3TNW5 500 aa8.93□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Trmt1Q3TX08 663 aa8.93□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Klra7Q60654 280 aa8.93□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Fgfr1opQ66JX5 399 aa8.93□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Krt87Q6IMF0 495 aa8.93□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Rhbdf1Q6PIX5 856 aa8.93□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Ddx10Q80Y44 875 aaKnown RBP8.93□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Bbs9Q811G0 885 aa8.93□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Cwf19l1Q8CI33 537 aa8.93□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Ccdc182Q9D9C6 152 aa8.93□□□□□ -0.98
Cdc40-201ENSMUST00000044166 PapolbQ9WVP6 641 aa8.93□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Gm28036V9GXJ1 658 aa8.93□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Zfp174B9EJW5 407 aa8.92□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Ccdc170D3YXL0 722 aa8.92□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Apol10bG3X9K7 334 aa8.92□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Gm6121L7MUF1 212 aa8.92□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Kif1cO35071 1100 aaKnown RBP8.92□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Kcnh2O35219 1162 aa8.92□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Atp6v0a2P15920 856 aa8.92□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Atp8a1P70704 1164 aa8.92□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Agxt2Q3UEG6 513 aa8.92□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Serpinb1cQ5SV42 375 aa8.92□□□□□ -0.98
Cdc40-201ENSMUST00000044166 HhatQ8BMT9 499 aa8.92□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Sgms1Q8VCQ6 419 aa8.92□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Ddah1Q9CWS0 285 aa8.92□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Aldh1b1Q9CZS1 519 aa8.92□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Krt34Q9D646 392 aa8.92□□□□□ -0.98
Cdc40-201ENSMUST00000044166 CoasyQ9DBL7 563 aa8.92□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Ddx25Q9QY15 484 aa8.92□□□□□ -0.98
Cdc40-201ENSMUST00000044166 DexiQ9WUQ7 95 aa8.92□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Duox1A2AQ92 1551 aa8.92□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Zmym2Q9CU65 1376 aa8.92□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Arhgap33Q80YF9 1305 aa8.92□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Gm28360A0A087WR25 190 aa8.92□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Fam71aB7XG49 585 aa8.92□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Cfap70D3YVL2 1141 aa8.92□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Nfxl1E9Q8I7 918 aaKnown RBP8.92□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Lrrc32G3XA59 663 aa8.92□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Serpinb6eI7HJI3 429 aa8.92□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Guca2bO09051 106 aa8.92□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Cetn3O35648 167 aa8.92□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Abi2P62484 446 aa8.92□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Ppp1r12cQ3UMT1 782 aa8.92□□□□□ -0.98
Cdc40-201ENSMUST00000044166 ChukQ60680 745 aa8.92□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Swap70Q6A028 585 aaKnown RBP8.92□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Pip5kl1Q6U7H8 395 aa8.92□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Miga2Q8BK03 593 aa8.92□□□□□ -0.98
Cdc40-201ENSMUST00000044166 NkrfQ8BY02 690 aaKnown RBP8.92□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Csgalnact2Q8C1F4 542 aa8.92□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Pkn3Q8K045 878 aa8.92□□□□□ -0.98
Cdc40-201ENSMUST00000044166 AagabQ8R2R3 316 aa8.92□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Senp2Q91ZX6 588 aa8.92□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Kctd10Q922M3 315 aa8.92□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Dnajc19Q9CQV7 116 aa8.92□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Plekhg2Q6KAU7 1340 aa8.92□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Rbbp6P97868 1790 aaKnown RBP8.92□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Vmn2r79E9Q067 851 aa8.92□□□□□ -0.98
Cdc40-201ENSMUST00000044166 H2afzP0C0S6 128 aa8.92□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Fam167bP17257 162 aa8.92□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Akr1b1P45376 316 aa8.92□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Setd4P58467 439 aa8.92□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Hps5P59438 1126 aa8.92□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Casp4P70343 373 aa8.92□□□□□ -0.98
Cdc40-201ENSMUST00000044166 H2afvQ3THW5 128 aa8.92□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Gm5592Q3V0A6 857 aa8.92□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Zdhhc24Q6IR37 284 aa8.92□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Ccdc189Q6NZQ0 333 aa8.92□□□□□ -0.98
Cdc40-201ENSMUST00000044166 NostrinQ6WKZ7 506 aa8.92□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Ccdc15Q8C9M2 810 aa8.92□□□□□ -0.98
Cdc40-201ENSMUST00000044166 GanQ8CA72 597 aa8.92□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Sugp1Q8CH02 643 aaKnown RBP8.92□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Lpin2Q99PI5 893 aa8.92□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Galntl5Q9D4M9 431 aa8.92□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Slfn14V9GXG1 899 aa8.92□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Gm30191A0A0U1RNT7 187 aa8.91□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Fam171a1A2ATK9 892 aa8.91□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Mucl2P02815 138 aa8.91□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Polr2fP61219 127 aa8.91□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Fam183bQ5NC57 135 aa8.91□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Herc4Q6PAV2 1057 aa8.91□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Celf4Q7TSY6 486 aa8.91□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Daam1Q8BPM0 1077 aa8.91□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Frmd4bQ920B0 1035 aa8.91□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Rasgef1cQ9D300 466 aa8.91□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Atp6v1e2Q9D593 226 aa8.91□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Cul5Q9D5V5 780 aa8.91□□□□□ -0.98
Cdc40-201ENSMUST00000044166 SmapQ9R0P4 181 aaKnown RBP8.91□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Gm14525B1AZA0 212 aa8.91□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Gm2012B1B0R1 212 aa8.91□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Ccdc78D3Z5T1 437 aa8.91□□□□□ -0.98
Cdc40-201ENSMUST00000044166 R3hdm1E9Q9Q2 1135 aaKnown RBP8.91□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Gm5814J3QP80 125 aa8.91□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Mboat4P0C7A3 435 aa8.91□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Psmc4P54775 418 aa8.91□□□□□ -0.98
Cdc40-201ENSMUST00000044166 HelqQ2VPA6 1069 aa8.91□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Pyroxd1Q3TMV7 498 aa8.91□□□□□ -0.98
Retrieved 100 of 22,080 RNA–protein pairs in 18.1 ms