RNA–Protein interactions for RNA: ENSMUST00000005394.12

Ufd1-201, Transcript of Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ufd1, Length 1,996 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1-201ENSMUST00000005394 Rabl3Q9D4V7 236 aa13.05□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Slc34a2Q9DBP0 697 aa13.05□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Arpp21Q9DCB4 807 aa13.05□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Nup50Q9JIH2 466 aaKnown RBP13.05□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Krt27Q9Z320 448 aa13.05□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Zdbf2Q5SS00 2493 aaKnown RBP13.05□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Ano3A2AHL1 981 aa13.05□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Rsbn1lD3Z0K6 821 aa13.05□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Nfil3O08750 462 aa13.05□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Psd3Q2PFD7 1037 aa13.05□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Ppp1r21Q3TDD9 780 aa13.05□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Ccdc110Q3V125 848 aa13.05□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Taok1Q5F2E8 1001 aa13.05□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Grm4Q68EF4 912 aa13.05□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Krt87Q6IMF0 495 aa13.05□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Retreg2Q6NS82 541 aa13.05□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Ccdc189Q6NZQ0 333 aa13.05□□□□□ -0.32
Ufd1-201ENSMUST00000005394 TwistnbQ78WZ7 330 aaKnown RBP13.05□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Celf4Q7TSY6 486 aa13.05□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Tcp10aQ80W76 438 aa13.05□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Stkld1Q80YS9 662 aa13.05□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Gpr180Q8BPS4 441 aa13.05□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Abcf3Q8K268 709 aa13.05□□□□□ -0.32
Ufd1-201ENSMUST00000005394 SfpqQ8VIJ6 699 aaKnown RBP13.05□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Lrrc34Q9DAM1 415 aa13.05□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Znf394Q9Z1D9 521 aa13.05□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Col5a2Q3U962 1497 aa13.05□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Phrf1A6H619 1682 aa13.04□□□□□ -0.32
Ufd1-201ENSMUST00000005394 MtrA6H5Y3 1253 aa13.04□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Rasal2E9PW37 1286 aa13.04□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Cetn3O35648 167 aa13.04□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Mex3cQ05A36 652 aaKnown RBP13.04□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Glg1Q61543 1175 aaKnown RBP13.04□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Lca5Q80ST9 704 aa13.04□□□□□ -0.32
Ufd1-201ENSMUST00000005394 R3hdm2Q80TM6 1044 aaKnown RBP13.04□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Q8BGD0 127 aa13.04□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Skor1Q8BX46 964 aa13.04□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Thumpd2Q9CZB3 528 aa13.04□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Krt34Q9D646 392 aa13.04□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Q9DA42 136 aa13.04□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Rsrc1Q9DBU6 334 aa13.04□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Stk32bQ9JJX8 414 aa13.04□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Sel1lQ9Z2G6 790 aa13.04□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Tada2bD3Z4Z0 420 aaKnown RBP13.03□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Gm45837F7D3W5 961 aa13.03□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Ppp1r9aH3BJD6 1292 aa13.03□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Guca2bO09051 106 aa13.03□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Diaph2O70566 1098 aa13.03□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Orc4O88708 433 aa13.03□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Ephb2P54763 986 aa13.03□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Setd4P58467 439 aa13.03□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Q3UTZ3 580 aa13.03□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Thrap3Q569Z6 951 aaKnown RBP13.03□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Ccdc125Q5U465 500 aa13.03□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Rasa3Q60790 834 aa13.03□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Krt12Q64291 487 aa13.03□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Nlrp14Q6B966 993 aa13.03□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Psd2Q6P1I6 770 aa13.03□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Rbm41Q8JZV4 413 aa13.03□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Tesk2Q8VCT9 570 aa13.03□□□□□ -0.32
Ufd1-201ENSMUST00000005394 WaslQ91YD9 501 aa13.03□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Grhl1Q921D9 618 aa13.03□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Pde2aQ922S4 916 aa13.03□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Golph3Q9CRA5 298 aa13.03□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Cd274Q9EP73 290 aa13.03□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Tmem47Q9JJG6 181 aa13.03□□□□□ -0.32
Ufd1-201ENSMUST00000005394 DexiQ9WUQ7 95 aa13.03□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Cyp2ab1S4R196 498 aa13.03□□□□□ -0.32
Ufd1-201ENSMUST00000005394 NesQ6P5H2 1864 aaKnown RBP13.03□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Gm7356A0A087WSA6 508 aa13.03□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Gm36210A0A1B0GS00 229 aa13.03□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Ttll10A4Q9F3 704 aa13.03□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Zfp839E9PUU5 921 aa13.03□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Mroh9G5E8L9 891 aa13.03□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Serpinb6eI7HJI3 429 aa13.03□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Rfpl4bJ3QPR6 266 aa13.03□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Stk10O55098 966 aa13.03□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Rbm46P86049 533 aa13.03□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Lrig3Q6P1C6 1117 aa13.03□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Parp6Q6P6P7 630 aa13.03□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Ahcyl1Q80SW1 530 aa13.03□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Thap3Q8BJ25 218 aa13.03□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Kirrel3Q8BR86 778 aa13.03□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Arhgef19Q8BWA8 802 aa13.03□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Inpp5fQ8CDA1 1132 aa13.03□□□□□ -0.32
Ufd1-201ENSMUST00000005394 PdxkQ8K183 312 aa13.03□□□□□ -0.32
Ufd1-201ENSMUST00000005394 AdpgkQ8VDL4 496 aa13.03□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Ndufv1Q91YT0 464 aa13.03□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Igf2bp3Q9CPN8 579 aaKnown RBP13.03□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Krt71Q9R0H5 524 aa13.03□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Slc12a7Q9WVL3 1083 aa13.03□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Ttc38A3KMP2 465 aa13.02□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Zfp174B9EJW5 407 aa13.02□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Srsf11E9Q6E5 511 aaKnown RBP13.02□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Zfp408H7BX78 710 aa13.02□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Mboat4P0C7A3 435 aa13.02□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Sar1aP36536 198 aa13.02□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Nsun7Q14AW5 724 aa13.02□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Foxd1Q61345 456 aa13.02□□□□□ -0.32
Ufd1-201ENSMUST00000005394 FdxrQ61578 494 aa13.02□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 32.5 ms