RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Trim65Q8BFW4 522 aa13.71□□□□□ -0.21
Clcn3-201ENSMUST00000004430 Zfp446Q8C9M8 523 aa13.71□□□□□ -0.21
Clcn3-201ENSMUST00000004430 Akap11E9Q777 1895 aa13.71□□□□□ -0.21
Clcn3-201ENSMUST00000004430 Gm1758F6VZZ1 202 aa13.71□□□□□ -0.21
Clcn3-201ENSMUST00000004430 Cyp4f40G3UW81 524 aa13.71□□□□□ -0.21
Clcn3-201ENSMUST00000004430 Fen1P39749 378 aa13.71□□□□□ -0.21
Clcn3-201ENSMUST00000004430 Dynlt1P51807 113 aa13.71□□□□□ -0.21
Clcn3-201ENSMUST00000004430 SkiQ60698 725 aa13.71□□□□□ -0.21
Clcn3-201ENSMUST00000004430 AsnsQ61024 561 aa13.71□□□□□ -0.21
Clcn3-201ENSMUST00000004430 Slc18a1Q8R090 521 aa13.71□□□□□ -0.21
Clcn3-201ENSMUST00000004430 RpainQ9CWY9 219 aa13.71□□□□□ -0.21
Clcn3-201ENSMUST00000004430 PlekQ9JHK5 350 aaKnown RBP13.71□□□□□ -0.21
Clcn3-201ENSMUST00000004430 Iqcj-Schip1A0A088MLT8 559 aa13.71□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Gm7995L7N2E4 160 aa13.71□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Schip1P0DPB4 484 aa13.71□□□□□ -0.22
Clcn3-201ENSMUST00000004430 NsfP46460 744 aa13.71□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Znf280dQ68FE8 974 aa13.71□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Q8R1Y2 203 aa13.71□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Tnpo2Q99LG2 887 aaKnown RBP13.71□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Cst12Q9DAN8 128 aa13.71□□□□□ -0.22
Clcn3-201ENSMUST00000004430 4931408C20RikE9PWP9 1381 aa13.7□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Oip5A2AQ14 241 aa13.7□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Slc27a3O88561 667 aa13.7□□□□□ -0.22
Clcn3-201ENSMUST00000004430 VillQ91YD6 859 aa13.7□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Snx10Q9CWT3 201 aa13.7□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Uts2Q9QZQ3 123 aa13.7□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Sgk1Q9WVC6 431 aa13.7□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Camk4P08414 469 aa13.7□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Kiaa0319Q5SZV5 1081 aa13.7□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Serpinb6Q60854 378 aa13.7□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Trpc6Q61143 930 aa13.7□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Cpa1Q7TPZ8 419 aa13.7□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Zcrb1Q9CZ96 217 aaKnown RBP13.7□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Rtn3Q9ES97 964 aa13.7□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Ddx20Q9JJY4 825 aaKnown RBP13.7□□□□□ -0.22
Clcn3-201ENSMUST00000004430 PfasQ5SUR0 1337 aa13.7□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Lrriq4A6H6A4 596 aa13.7□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Folh1O35409 752 aa13.7□□□□□ -0.22
Clcn3-201ENSMUST00000004430 DtnbO70585 659 aa13.7□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Zscan2Q07230 614 aa13.7□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Tor1aip1Q921T2 595 aaKnown RBP13.7□□□□□ -0.22
Clcn3-201ENSMUST00000004430 CactinQ9CS00 772 aaKnown RBP13.7□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Bcl2l12Q9D3J3 255 aa13.7□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Fthl17aQ9DAX0 182 aa13.7□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Gm15262A0A140LIQ5 728 aa13.69□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Gm11549A0A286YD83 63 aa13.69□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Elmo3Q8BYZ7 720 aa13.69□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Ldlrap1Q8C142 308 aa13.69□□□□□ -0.22
Clcn3-201ENSMUST00000004430 OplahQ8K010 1288 aa13.69□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Spdl1Q923A2 608 aa13.69□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Iqcf1Q9D9K8 182 aa13.69□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Prl2c5Q9JLV9 222 aa13.69□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Hipk4Q3V016 616 aa13.69□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Ttc22Q8C159 568 aa13.69□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Vmn1r218Q8R261 298 aa13.69□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Tnrc6cQ3UHC0 1690 aaKnown RBP13.69□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Pbx1P41778 430 aa13.69□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Smad1P70340 465 aa13.69□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Qrich1Q3UA37 777 aa13.69□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Rasa3Q60790 834 aa13.69□□□□□ -0.22
Clcn3-201ENSMUST00000004430 WaplQ65Z40 1200 aaKnown RBP13.69□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Mindy1Q76LS9 468 aa13.69□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Eif2ak1Q9Z2R9 619 aa13.69□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Olfr247E9PVJ7 320 aa13.68□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Olfr819K7N727 320 aa13.68□□□□□ -0.22
Clcn3-201ENSMUST00000004430 CaluO35887 315 aa13.68□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Lzts1P60853 599 aa13.68□□□□□ -0.22
Clcn3-201ENSMUST00000004430 YwhagP61982 247 aaKnown RBP13.68□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Stx2Q00262 289 aa13.68□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Caprin2Q05A80 1031 aaKnown RBP13.68□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Sema4bQ62179 823 aa13.68□□□□□ -0.22
Clcn3-201ENSMUST00000004430 TbataQ7TSD4 393 aa13.68□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Epc2Q8C0I4 808 aa13.68□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Acot11Q8VHQ9 594 aa13.68□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Rev1Q920Q2 1249 aa13.68□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Cnot8Q9D8X5 292 aa13.68□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Tjp2Q9Z0U1 1167 aaKnown RBP13.68□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Rasgrp1Q9Z1S3 795 aa13.68□□□□□ -0.22
Clcn3-201ENSMUST00000004430 HnrnpcQ9Z204 313 aaKnown RBP13.68□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Gm45208A0A140LJ36 292 aa13.68□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Zfp984A2A7A2 547 aa13.68□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Krt13P08730 437 aa13.68□□□□□ -0.22
Clcn3-201ENSMUST00000004430 SftpbP50405 377 aa13.68□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Klra9Q2TJJ8 266 aa13.68□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Tmed1Q3V009 227 aa13.68□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Brd2Q7JJ13 798 aaKnown RBP13.68□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Mageb18Q8BQR7 327 aa13.68□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Calhm6Q8C9E8 313 aa13.68□□□□□ -0.22
Clcn3-201ENSMUST00000004430 P3h4Q8K2B0 443 aa13.68□□□□□ -0.22
Clcn3-201ENSMUST00000004430 MgarpQ8VI64 283 aa13.68□□□□□ -0.22
Clcn3-201ENSMUST00000004430 NelfcdQ922L6 591 aa13.68□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Mmtag2Q99LX5 260 aaKnown RBP13.68□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Trap1Q9CQN1 706 aaKnown RBP13.68□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Cmtr1Q9DBC3 837 aa13.68□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Ecel1Q9JMI0 775 aa13.68□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Rnf4Q9QZS2 194 aa13.68□□□□□ -0.22
Clcn3-201ENSMUST00000004430 1700003F12RikA2AKE5 210 aa13.68□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Lrrc55Q3UY51 311 aa13.68□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Stxbp3Q60770 592 aa13.68□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Heatr3Q8BQM4 679 aa13.68□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 24.2 ms