RNA–Protein interactions for RNA: ENST00000640091.1

NECAP1-223, Transcript of NECAP endocytosis associated 1, human

TSL 2

Gene NECAP1, Length 2,115 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAP1-223	ENST00000640091	PEX3	P56589	373 aa		11.56	□□□□□ -0.56
NECAP1-223	ENST00000640091	KCNJ12	Q14500	433 aa		11.56	□□□□□ -0.56
NECAP1-223	ENST00000640091	TCP11X2	Q5H9J9	407 aa		11.56	□□□□□ -0.56
NECAP1-223	ENST00000640091	EPM2AIP1	Q7L775	607 aa	Predicted RBP	11.56	□□□□□ -0.56
NECAP1-223	ENST00000640091	APTX	Q7Z2E3	356 aa	Known RBP	11.56	□□□□□ -0.56
NECAP1-223	ENST00000640091	AFAP1L1	Q8TED9	768 aa		11.56	□□□□□ -0.56
NECAP1-223	ENST00000640091	TRIM44	Q96DX7	344 aa	Predicted RBP	11.56	□□□□□ -0.56
NECAP1-223	ENST00000640091	KCTD10	Q9H3F6	313 aa		11.56	□□□□□ -0.56
NECAP1-223	ENST00000640091	NRBP2	Q9NSY0	501 aa		11.56	□□□□□ -0.56
NECAP1-223	ENST00000640091	LARS	Q9P2J5	1176 aa	Known RBP	11.56	□□□□□ -0.56
NECAP1-223	ENST00000640091	DGAT1	O75907	488 aa		11.55	□□□□□ -0.56
NECAP1-223	ENST00000640091	POLG	P54098	1239 aa	Predicted RBP	11.55	□□□□□ -0.56
NECAP1-223	ENST00000640091	FCGRT	P55899	365 aa		11.55	□□□□□ -0.56
NECAP1-223	ENST00000640091	IRX5	P78411	483 aa	Predicted RBP	11.55	□□□□□ -0.56
NECAP1-223	ENST00000640091	TNFAIP2	Q03169	654 aa		11.55	□□□□□ -0.56
NECAP1-223	ENST00000640091	KRT31	Q15323	416 aa		11.55	□□□□□ -0.56
NECAP1-223	ENST00000640091	KNOP1	Q1ED39	458 aa	Known RBP	11.55	□□□□□ -0.56
NECAP1-223	ENST00000640091	DUSP28	Q4G0W2	176 aa		11.55	□□□□□ -0.56
NECAP1-223	ENST00000640091	IQSEC1	Q6DN90	963 aa		11.55	□□□□□ -0.56
NECAP1-223	ENST00000640091	MSL3	Q8N5Y2	521 aa	Known RBP	11.55	□□□□□ -0.56
NECAP1-223	ENST00000640091	ZNF507	Q8TCN5	953 aa		11.55	□□□□□ -0.56
NECAP1-223	ENST00000640091	LENG1	Q96BZ8	264 aa	Predicted RBP	11.55	□□□□□ -0.56
NECAP1-223	ENST00000640091	ZNF830	Q96NB3	372 aa	Predicted RBP	11.55	□□□□□ -0.56
NECAP1-223	ENST00000640091	VPS16	Q9H269	839 aa		11.55	□□□□□ -0.56
NECAP1-223	ENST00000640091	RNPEP	Q9H4A4	650 aa		11.55	□□□□□ -0.56
NECAP1-223	ENST00000640091	XPNPEP1	Q9NQW7	623 aa		11.55	□□□□□ -0.56
NECAP1-223	ENST00000640091	PDLIM7	Q9NR12	457 aa		11.55	□□□□□ -0.56
NECAP1-223	ENST00000640091	INTS13	Q9NVM9	706 aa		11.55	□□□□□ -0.56
NECAP1-223	ENST00000640091	DYNC1LI2	O43237	492 aa	Predicted RBP	11.54	□□□□□ -0.56
NECAP1-223	ENST00000640091	TEX33	O43247	280 aa		11.54	□□□□□ -0.56
NECAP1-223	ENST00000640091	LGR5	O75473	907 aa		11.54	□□□□□ -0.56
NECAP1-223	ENST00000640091	ZNF865	P0CJ78	1059 aa	Predicted RBP	11.54	□□□□□ -0.56
NECAP1-223	ENST00000640091	PLS3	P13797	630 aa		11.54	□□□□□ -0.56
NECAP1-223	ENST00000640091	FLT3LG	P49771	235 aa		11.54	□□□□□ -0.56
NECAP1-223	ENST00000640091	LRRC63	Q05C16	580 aa		11.54	□□□□□ -0.56
NECAP1-223	ENST00000640091	ZCWPW2	Q504Y3	356 aa		11.54	□□□□□ -0.56
NECAP1-223	ENST00000640091	FILIP1	Q7Z7B0	1213 aa		11.54	□□□□□ -0.56
NECAP1-223	ENST00000640091	SOCS4	Q8WXH5	440 aa		11.54	□□□□□ -0.56
NECAP1-223	ENST00000640091	BSND	Q8WZ55	320 aa		11.54	□□□□□ -0.56
NECAP1-223	ENST00000640091	TMEM143	Q96AN5	459 aa		11.54	□□□□□ -0.56
NECAP1-223	ENST00000640091	DRC1	Q96MC2	740 aa		11.54	□□□□□ -0.56
NECAP1-223	ENST00000640091	APBA2	Q99767	749 aa		11.54	□□□□□ -0.56
NECAP1-223	ENST00000640091	KIFC3	Q9BVG8	833 aa		11.54	□□□□□ -0.56
NECAP1-223	ENST00000640091	NIFK	Q9BYG3	293 aa	Known RBP	11.54	□□□□□ -0.56
NECAP1-223	ENST00000640091	THAP9	Q9H5L6	903 aa		11.54	□□□□□ -0.56
NECAP1-223	ENST00000640091	RNF186	Q9NXI6	227 aa		11.54	□□□□□ -0.56
NECAP1-223	ENST00000640091	TAB2	Q9NYJ8	693 aa		11.54	□□□□□ -0.56
NECAP1-223	ENST00000640091	SEL1L	Q9UBV2	794 aa		11.54	□□□□□ -0.56
NECAP1-223	ENST00000640091	CCDC169	A6NNP5	214 aa		11.54	□□□□□ -0.56
NECAP1-223	ENST00000640091		K7ENM7	598 aa		11.54	□□□□□ -0.56
NECAP1-223	ENST00000640091	SLC16A4	O15374	487 aa		11.54	□□□□□ -0.56
NECAP1-223	ENST00000640091	KIF20A	O95235	890 aa		11.54	□□□□□ -0.56
NECAP1-223	ENST00000640091	ZNF286B	P0CG31	522 aa		11.54	□□□□□ -0.56
NECAP1-223	ENST00000640091	SP3	Q02447	781 aa		11.54	□□□□□ -0.56
NECAP1-223	ENST00000640091	PRKCZ	Q05513	592 aa		11.54	□□□□□ -0.56
NECAP1-223	ENST00000640091	NR1I3	Q14994	352 aa		11.54	□□□□□ -0.56
NECAP1-223	ENST00000640091	PLCB4	Q15147	1175 aa		11.54	□□□□□ -0.56
NECAP1-223	ENST00000640091	OLFML2B	Q68BL8	750 aa		11.54	□□□□□ -0.56
NECAP1-223	ENST00000640091	PLPPR4	Q7Z2D5	763 aa		11.54	□□□□□ -0.56
NECAP1-223	ENST00000640091	PPTC7	Q8NI37	304 aa		11.54	□□□□□ -0.56
NECAP1-223	ENST00000640091	TRAPPC12	Q8WVT3	735 aa		11.54	□□□□□ -0.56
NECAP1-223	ENST00000640091	ZBTB10	Q96DT7	871 aa		11.54	□□□□□ -0.56
NECAP1-223	ENST00000640091	CEP89	Q96ST8	783 aa		11.54	□□□□□ -0.56
NECAP1-223	ENST00000640091	TSG101	Q99816	390 aa		11.54	□□□□□ -0.56
NECAP1-223	ENST00000640091	SMARCAD1	Q9H4L7	1026 aa		11.54	□□□□□ -0.56
NECAP1-223	ENST00000640091	ATP6V0A4	Q9HBG4	840 aa		11.54	□□□□□ -0.56
NECAP1-223	ENST00000640091	LRRC10B	A6NIK2	292 aa		11.53	□□□□□ -0.56
NECAP1-223	ENST00000640091	CLIC2	O15247	247 aa		11.53	□□□□□ -0.56
NECAP1-223	ENST00000640091	LGALS2	P05162	132 aa		11.53	□□□□□ -0.56
NECAP1-223	ENST00000640091	FKBP3	Q00688	224 aa	Known RBP	11.53	□□□□□ -0.56
NECAP1-223	ENST00000640091	ADAM9	Q13443	819 aa		11.53	□□□□□ -0.56
NECAP1-223	ENST00000640091	EMC2	Q15006	297 aa		11.53	□□□□□ -0.56
NECAP1-223	ENST00000640091	TARBP2	Q15633	366 aa	Known RBP	11.53	□□□□□ -0.56
NECAP1-223	ENST00000640091	CCDC186	Q7Z3E2	898 aa		11.53	□□□□□ -0.56
NECAP1-223	ENST00000640091	TMC6	Q7Z403	805 aa		11.53	□□□□□ -0.56
NECAP1-223	ENST00000640091	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	11.53	□□□□□ -0.56
NECAP1-223	ENST00000640091	OR6J1	Q8NGC5	347 aa		11.53	□□□□□ -0.56
NECAP1-223	ENST00000640091	SLC7A3	Q8WY07	619 aa		11.53	□□□□□ -0.56
NECAP1-223	ENST00000640091	BBX	Q8WY36	941 aa	Predicted RBP	11.53	□□□□□ -0.56
NECAP1-223	ENST00000640091	CNOT6L	Q96LI5	555 aa	Known RBP	11.53	□□□□□ -0.56
NECAP1-223	ENST00000640091	DHX33	Q9H6R0	707 aa	Known RBP	11.53	□□□□□ -0.56
NECAP1-223	ENST00000640091	MAGEC2	Q9UBF1	373 aa	Predicted RBP	11.53	□□□□□ -0.56
NECAP1-223	ENST00000640091	LIMA1	Q9UHB6	759 aa	Known RBP	11.53	□□□□□ -0.56
NECAP1-223	ENST00000640091	TRPC6	Q9Y210	931 aa		11.53	□□□□□ -0.56
NECAP1-223	ENST00000640091	PCDHB13	Q9Y5F0	798 aa		11.53	□□□□□ -0.56
NECAP1-223	ENST00000640091		A0A1B0GTH6	734 aa		11.53	□□□□□ -0.56
NECAP1-223	ENST00000640091	PES1	O00541	588 aa	Known RBP	11.53	□□□□□ -0.56
NECAP1-223	ENST00000640091	N4BP3	O15049	544 aa		11.53	□□□□□ -0.56
NECAP1-223	ENST00000640091	TGFB1I1	O43294	461 aa		11.53	□□□□□ -0.56
NECAP1-223	ENST00000640091	CBFA2T2	O43439	604 aa		11.53	□□□□□ -0.56
NECAP1-223	ENST00000640091	PPFIA4	O75335	1185 aa		11.53	□□□□□ -0.56
NECAP1-223	ENST00000640091	CDC25B	P30305	580 aa		11.53	□□□□□ -0.56
NECAP1-223	ENST00000640091	NPTX2	P47972	431 aa		11.53	□□□□□ -0.56
NECAP1-223	ENST00000640091	CHMP4BP1	P59074	171 aa		11.53	□□□□□ -0.56
NECAP1-223	ENST00000640091	DRP2	Q13474	957 aa		11.53	□□□□□ -0.56
NECAP1-223	ENST00000640091	LRRC55	Q6ZSA7	311 aa		11.53	□□□□□ -0.56
NECAP1-223	ENST00000640091	HAUS6	Q7Z4H7	955 aa		11.53	□□□□□ -0.56
NECAP1-223	ENST00000640091	REM2	Q8IYK8	340 aa	Predicted RBP	11.53	□□□□□ -0.56
NECAP1-223	ENST00000640091	MCPH1	Q8NEM0	835 aa		11.53	□□□□□ -0.56
NECAP1-223	ENST00000640091	ATP8B4	Q8TF62	1192 aa		11.53	□□□□□ -0.56

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