RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 TKFCQ3LXA3 575 aa7.12□□□□□ -1.27
CCDC7-216ENST00000640058 USP30Q70CQ3 517 aa7.12□□□□□ -1.27
CCDC7-216ENST00000640058 FUKQ8N0W3 1084 aa7.12□□□□□ -1.27
CCDC7-216ENST00000640058 OR14A2Q96R54 314 aa7.12□□□□□ -1.27
CCDC7-216ENST00000640058 FANCLQ9NW38 375 aa7.12□□□□□ -1.27
CCDC7-216ENST00000640058 PUF60Q9UHX1 559 aaKnown RBP7.12□□□□□ -1.27
CCDC7-216ENST00000640058 MUSKO15146 869 aa7.11□□□□□ -1.27
CCDC7-216ENST00000640058 RFPL3O75679 317 aa7.11□□□□□ -1.27
CCDC7-216ENST00000640058 PRLP01236 227 aa7.11□□□□□ -1.27
CCDC7-216ENST00000640058 TNFRSF1AP19438 455 aa7.11□□□□□ -1.27
CCDC7-216ENST00000640058 PTX3P26022 381 aaPredicted RBP7.11□□□□□ -1.27
CCDC7-216ENST00000640058 FNTBP49356 437 aa7.11□□□□□ -1.27
CCDC7-216ENST00000640058 TCEA2Q15560 299 aa7.11□□□□□ -1.27
CCDC7-216ENST00000640058 ZNF174Q15697 407 aa7.11□□□□□ -1.27
CCDC7-216ENST00000640058 TRIM68Q6AZZ1 485 aa7.11□□□□□ -1.27
CCDC7-216ENST00000640058 HOMER1Q86YM7 354 aa7.11□□□□□ -1.27
CCDC7-216ENST00000640058 FOXB1Q99853 325 aa7.11□□□□□ -1.27
CCDC7-216ENST00000640058 OR10A2Q9H208 303 aa7.11□□□□□ -1.27
CCDC7-216ENST00000640058 B4GALT6Q9UBX8 382 aa7.11□□□□□ -1.27
CCDC7-216ENST00000640058 TSC22D4Q9Y3Q8 395 aa7.11□□□□□ -1.27
CCDC7-216ENST00000640058 UBA6A0AVT1 1052 aaPredicted RBP7.1□□□□□ -1.27
CCDC7-216ENST00000640058 C1QTNF3-AMACRE9PGA6 284 aa7.1□□□□□ -1.27
CCDC7-216ENST00000640058 PRAMEF9Q5VWM5 478 aa7.1□□□□□ -1.27
CCDC7-216ENST00000640058 CNNM4Q6P4Q7 775 aa7.1□□□□□ -1.27
CCDC7-216ENST00000640058 CFHR4Q92496 578 aa7.1□□□□□ -1.27
CCDC7-216ENST00000640058 APPBP2Q92624 585 aa7.1□□□□□ -1.27
CCDC7-216ENST00000640058 CDK5RAP1Q96SZ6 601 aaKnown RBP7.1□□□□□ -1.27
CCDC7-216ENST00000640058 PLA2G12BQ9BX93 195 aa7.1□□□□□ -1.27
CCDC7-216ENST00000640058 ACSS2Q9NR19 701 aa7.1□□□□□ -1.27
CCDC7-216ENST00000640058 H2AFY2Q9P0M6 372 aaPredicted RBP7.1□□□□□ -1.27
CCDC7-216ENST00000640058 MAGEC2Q9UBF1 373 aaPredicted RBP7.1□□□□□ -1.27
CCDC7-216ENST00000640058 MRPL42Q9Y6G3 142 aaKnown RBP7.1□□□□□ -1.27
CCDC7-216ENST00000640058 NEK4P51957 841 aa7.09□□□□□ -1.27
CCDC7-216ENST00000640058 ROM1Q03395 351 aa7.09□□□□□ -1.27
CCDC7-216ENST00000640058 MAP3K12Q12852 859 aa7.09□□□□□ -1.27
CCDC7-216ENST00000640058 ADAM15Q13444 863 aa7.09□□□□□ -1.27
CCDC7-216ENST00000640058 NFYCQ13952 458 aa7.09□□□□□ -1.27
CCDC7-216ENST00000640058 HS1BP3Q53T59 392 aa7.09□□□□□ -1.27
CCDC7-216ENST00000640058 SPDYAQ5MJ70 313 aa7.09□□□□□ -1.27
CCDC7-216ENST00000640058 SLFN12LQ6IEE8 588 aa7.09□□□□□ -1.27
CCDC7-216ENST00000640058 BCL6BQ8N143 479 aaPredicted RBP7.09□□□□□ -1.27
CCDC7-216ENST00000640058 NXPE1Q8N323 547 aa7.09□□□□□ -1.27
CCDC7-216ENST00000640058 E2F7Q96AV8 911 aa7.09□□□□□ -1.27
CCDC7-216ENST00000640058 TUBGCP5Q96RT8 1024 aa7.09□□□□□ -1.27
CCDC7-216ENST00000640058 ADOQ96SZ5 270 aa7.09□□□□□ -1.27
CCDC7-216ENST00000640058 ELF4Q99607 663 aaPredicted RBP7.09□□□□□ -1.27
CCDC7-216ENST00000640058 STAT3P40763 770 aa7.08□□□□□ -1.28
CCDC7-216ENST00000640058 ACAP1Q15027 740 aa7.08□□□□□ -1.28
CCDC7-216ENST00000640058 R3HDM1Q15032 1099 aaKnown RBP7.08□□□□□ -1.28
CCDC7-216ENST00000640058 CREB3L3Q68CJ9 461 aa7.08□□□□□ -1.28
CCDC7-216ENST00000640058 C16orf86Q6ZW13 317 aa7.08□□□□□ -1.28
CCDC7-216ENST00000640058 JAZF1Q86VZ6 243 aa7.08□□□□□ -1.28
CCDC7-216ENST00000640058 DHX37Q8IY37 1157 aaKnown RBP7.08□□□□□ -1.28
CCDC7-216ENST00000640058 OR5AN1Q8NGI8 311 aa7.08□□□□□ -1.28
CCDC7-216ENST00000640058 MAML3Q96JK9 1138 aa7.08□□□□□ -1.28
CCDC7-216ENST00000640058 TOMM22Q9NS69 142 aa7.08□□□□□ -1.28
CCDC7-216ENST00000640058 ZKSCAN5Q9Y2L8 839 aa7.08□□□□□ -1.28
CCDC7-216ENST00000640058 ZNF891A8MT65 544 aaPredicted RBP7.07□□□□□ -1.28
CCDC7-216ENST00000640058 RAD17O75943 681 aa7.07□□□□□ -1.28
CCDC7-216ENST00000640058 CYP17A1P05093 508 aa7.07□□□□□ -1.28
CCDC7-216ENST00000640058 COMTP21964 271 aa7.07□□□□□ -1.28
CCDC7-216ENST00000640058 ANTXR2P58335 489 aa7.07□□□□□ -1.28
CCDC7-216ENST00000640058 TTC38Q5R3I4 469 aa7.07□□□□□ -1.28
CCDC7-216ENST00000640058 ESRP1Q6NXG1 681 aaKnown RBP7.07□□□□□ -1.28
CCDC7-216ENST00000640058 SYNPOQ8N3V7 929 aa7.07□□□□□ -1.28
CCDC7-216ENST00000640058 C16orf92Q96LL3 132 aa7.07□□□□□ -1.28
CCDC7-216ENST00000640058 TMPRSS5Q9H3S3 457 aa7.07□□□□□ -1.28
CCDC7-216ENST00000640058 OXSMQ9NWU1 459 aa7.07□□□□□ -1.28
CCDC7-216ENST00000640058 SAE1Q9UBE0 346 aaPredicted RBP7.07□□□□□ -1.28
CCDC7-216ENST00000640058 CDC45O75419 566 aa7.06□□□□□ -1.28
CCDC7-216ENST00000640058 APOL3O95236 402 aa7.06□□□□□ -1.28
CCDC7-216ENST00000640058 ATP2A2P16615 1042 aaKnown RBP7.06□□□□□ -1.28
CCDC7-216ENST00000640058 ACO1P21399 889 aaKnown RBP7.06□□□□□ -1.28
CCDC7-216ENST00000640058 ZXDAP98168 799 aa7.06□□□□□ -1.28
CCDC7-216ENST00000640058 DUSP8Q13202 625 aa7.06□□□□□ -1.28
CCDC7-216ENST00000640058 LRRTM3Q86VH5 581 aa7.06□□□□□ -1.28
CCDC7-216ENST00000640058 TMEM176AQ96HP8 235 aa7.06□□□□□ -1.28
CCDC7-216ENST00000640058 KRTAP4-5Q9BYR2 181 aa7.06□□□□□ -1.28
CCDC7-216ENST00000640058 INTS7Q9NVH2 962 aaKnown RBP7.06□□□□□ -1.28
CCDC7-216ENST00000640058 FAM83GA6ND36 823 aa7.05□□□□□ -1.28
CCDC7-216ENST00000640058 GAS7O60861 476 aa7.05□□□□□ -1.28
CCDC7-216ENST00000640058 MSX2P35548 267 aaPredicted RBP7.05□□□□□ -1.28
CCDC7-216ENST00000640058 ATP2C1P98194 919 aaPredicted RBP7.05□□□□□ -1.28
CCDC7-216ENST00000640058 HGFACQ04756 655 aa7.05□□□□□ -1.28
CCDC7-216ENST00000640058 MYBPC3Q14896 1274 aa7.05□□□□□ -1.28
CCDC7-216ENST00000640058 PRKD1Q15139 912 aaPredicted RBP7.05□□□□□ -1.28
CCDC7-216ENST00000640058 EPHA7Q15375 998 aa7.05□□□□□ -1.28
CCDC7-216ENST00000640058 DGKDQ16760 1214 aa7.05□□□□□ -1.28
CCDC7-216ENST00000640058 KLHDC10Q6PID8 442 aa7.05□□□□□ -1.28
CCDC7-216ENST00000640058 POLNQ7Z5Q5 900 aa7.05□□□□□ -1.28
CCDC7-216ENST00000640058 NIM1KQ8IY84 436 aa7.05□□□□□ -1.28
CCDC7-216ENST00000640058 GPR135Q8IZ08 494 aa7.05□□□□□ -1.28
CCDC7-216ENST00000640058 CHTF18Q8WVB6 975 aa7.05□□□□□ -1.28
CCDC7-216ENST00000640058 RTF1Q92541 710 aaKnown RBP7.05□□□□□ -1.28
CCDC7-216ENST00000640058 NINJ1Q92982 152 aa7.05□□□□□ -1.28
CCDC7-216ENST00000640058 IFT57Q9NWB7 429 aa7.05□□□□□ -1.28
CCDC7-216ENST00000640058 THG1LQ9NWX6 298 aaKnown RBP7.05□□□□□ -1.28
CCDC7-216ENST00000640058 DENND2AQ9ULE3 1009 aa7.05□□□□□ -1.28
CCDC7-216ENST00000640058 SPO11Q9Y5K1 396 aa7.05□□□□□ -1.28
CCDC7-216ENST00000640058 SLC30A1Q9Y6M5 507 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms