RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 DUSP10Q9Y6W6 482 aa16.58■□□□□ 0.24
TRIM3-215ENST00000639856 SSU72P8A0A1W2PR75 194 aa16.57■□□□□ 0.24
TRIM3-215ENST00000639856 PDXKO00764 312 aa16.57■□□□□ 0.24
TRIM3-215ENST00000639856 AKR1B10O60218 316 aa16.57■□□□□ 0.24
TRIM3-215ENST00000639856 GRIN3BO60391 1043 aa16.57■□□□□ 0.24
TRIM3-215ENST00000639856 SEC31AO94979 1220 aaKnown RBP16.57■□□□□ 0.24
TRIM3-215ENST00000639856 ATP1A1P05023 1023 aaKnown RBP16.57■□□□□ 0.24
TRIM3-215ENST00000639856 IRX3P78415 501 aaPredicted RBP16.57■□□□□ 0.24
TRIM3-215ENST00000639856 BMT2Q1RMZ1 405 aa16.57■□□□□ 0.24
TRIM3-215ENST00000639856 MAP1SQ66K74 1059 aaPredicted RBP16.57■□□□□ 0.24
TRIM3-215ENST00000639856 SYN2Q92777 582 aaPredicted RBP16.57■□□□□ 0.24
TRIM3-215ENST00000639856 ASCC2Q9H1I8 757 aaPredicted RBP16.57■□□□□ 0.24
TRIM3-215ENST00000639856 R3HDMLQ9H3Y0 253 aa16.57■□□□□ 0.24
TRIM3-215ENST00000639856 ARFGAP3Q9NP61 516 aa16.57■□□□□ 0.24
TRIM3-215ENST00000639856 CLEC11AQ9Y240 323 aa16.57■□□□□ 0.24
TRIM3-215ENST00000639856 SAMM50Q9Y512 469 aa16.57■□□□□ 0.24
TRIM3-215ENST00000639856 SAR1BQ9Y6B6 198 aa16.57■□□□□ 0.24
TRIM3-215ENST00000639856 ASTN1O14525 1302 aa16.57■□□□□ 0.24
TRIM3-215ENST00000639856 ANO9A1A5B4 782 aa16.57■□□□□ 0.24
TRIM3-215ENST00000639856 SFI1A8K8P3 1242 aa16.57■□□□□ 0.24
TRIM3-215ENST00000639856 CXCL11O14625 94 aa16.57■□□□□ 0.24
TRIM3-215ENST00000639856 TBCAO75347 108 aaKnown RBP16.57■□□□□ 0.24
TRIM3-215ENST00000639856 CCNE2O96020 404 aa16.57■□□□□ 0.24
TRIM3-215ENST00000639856 MYBP10242 640 aa16.57■□□□□ 0.24
TRIM3-215ENST00000639856 GJA5P36382 358 aa16.57■□□□□ 0.24
TRIM3-215ENST00000639856 CNTN2Q02246 1040 aa16.57■□□□□ 0.24
TRIM3-215ENST00000639856 PPIL2Q13356 520 aa16.57■□□□□ 0.24
TRIM3-215ENST00000639856 MAPK8IP2Q13387 824 aaPredicted RBP16.57■□□□□ 0.24
TRIM3-215ENST00000639856 MOGSQ13724 837 aa16.57■□□□□ 0.24
TRIM3-215ENST00000639856 BRD3Q15059 726 aa16.57■□□□□ 0.24
TRIM3-215ENST00000639856 C1orf186Q6ZWK4 172 aa16.57■□□□□ 0.24
TRIM3-215ENST00000639856 SECISBP2LQ93073 1101 aaKnown RBP16.57■□□□□ 0.24
TRIM3-215ENST00000639856 NACC1Q96RE7 527 aa16.57■□□□□ 0.24
TRIM3-215ENST00000639856 PAGR1Q9BTK6 254 aa16.57■□□□□ 0.24
TRIM3-215ENST00000639856 ZNF408Q9H9D4 720 aa16.57■□□□□ 0.24
TRIM3-215ENST00000639856 NLRC4Q9NPP4 1024 aa16.57■□□□□ 0.24
TRIM3-215ENST00000639856 PRDM10Q9NQV6 1147 aa16.57■□□□□ 0.24
TRIM3-215ENST00000639856 OLFML3Q9NRN5 406 aa16.57■□□□□ 0.24
TRIM3-215ENST00000639856 HDAC6Q9UBN7 1215 aa16.57■□□□□ 0.24
TRIM3-215ENST00000639856 MACROD2A1Z1Q3 448 aa16.56■□□□□ 0.24
TRIM3-215ENST00000639856 CALUO43852 315 aaPredicted RBP16.56■□□□□ 0.24
TRIM3-215ENST00000639856 PRPF6O94906 941 aaKnown RBP16.56■□□□□ 0.24
TRIM3-215ENST00000639856 MUTP22033 750 aa16.56■□□□□ 0.24
TRIM3-215ENST00000639856 KCNH2Q12809 1159 aa16.56■□□□□ 0.24
TRIM3-215ENST00000639856 FSTL1Q12841 308 aa16.56■□□□□ 0.24
TRIM3-215ENST00000639856 UGCGQ16739 394 aa16.56■□□□□ 0.24
TRIM3-215ENST00000639856 ASTE1Q2TB18 679 aaPredicted RBP16.56■□□□□ 0.24
TRIM3-215ENST00000639856 HGSNATQ68CP4 663 aa16.56■□□□□ 0.24
TRIM3-215ENST00000639856 ARMC9Q7Z3E5 817 aa16.56■□□□□ 0.24
TRIM3-215ENST00000639856 FRMD5Q7Z6J6 570 aa16.56■□□□□ 0.24
TRIM3-215ENST00000639856 INPP4AQ96PE3 977 aaPredicted RBP16.56■□□□□ 0.24
TRIM3-215ENST00000639856 LSM14BQ9BX40 385 aaKnown RBP16.56■□□□□ 0.24
TRIM3-215ENST00000639856 TBC1D22BQ9NU19 505 aa16.56■□□□□ 0.24
TRIM3-215ENST00000639856 RAB21Q9UL25 225 aa16.56■□□□□ 0.24
TRIM3-215ENST00000639856 LOXHD1Q8IVV2 1947 aa16.56■□□□□ 0.24
TRIM3-215ENST00000639856 GAP43P17677 238 aa16.55■□□□□ 0.24
TRIM3-215ENST00000639856 XRRA1Q6P2D8 792 aa16.55■□□□□ 0.24
TRIM3-215ENST00000639856 PNMA8AQ86V59 439 aaPredicted RBP16.55■□□□□ 0.24
TRIM3-215ENST00000639856 CHST13Q8NET6 341 aa16.55■□□□□ 0.24
TRIM3-215ENST00000639856 TRIM58Q8NG06 486 aa16.55■□□□□ 0.24
TRIM3-215ENST00000639856 CRACR2AQ9BSW2 395 aa16.55■□□□□ 0.24
TRIM3-215ENST00000639856 SPATC1LQ9H0A9 340 aa16.55■□□□□ 0.24
TRIM3-215ENST00000639856 TYW1Q9NV66 732 aaKnown RBP16.55■□□□□ 0.24
TRIM3-215ENST00000639856 AGTPBP1Q9UPW5 1226 aa16.55■□□□□ 0.24
TRIM3-215ENST00000639856 MYH10P35580 1976 aa16.55■□□□□ 0.24
TRIM3-215ENST00000639856 CNMDO75829 334 aa16.55■□□□□ 0.24
TRIM3-215ENST00000639856 GCNT3O95395 438 aa16.55■□□□□ 0.24
TRIM3-215ENST00000639856 TBC1D8O95759 1140 aa16.55■□□□□ 0.24
TRIM3-215ENST00000639856 P4HBP07237 508 aaKnown RBP16.55■□□□□ 0.24
TRIM3-215ENST00000639856 POLR2FP61218 127 aaKnown RBP16.55■□□□□ 0.24
TRIM3-215ENST00000639856 SLC9C1Q4G0N8 1177 aa16.55■□□□□ 0.24
TRIM3-215ENST00000639856 SFMBT2Q5VUG0 894 aa16.55■□□□□ 0.24
TRIM3-215ENST00000639856 RIOX2Q8IUF8 465 aa16.55■□□□□ 0.24
TRIM3-215ENST00000639856 ANKRD35Q8N283 1001 aa16.55■□□□□ 0.24
TRIM3-215ENST00000639856 TXNRD2Q9NNW7 524 aa16.55■□□□□ 0.24
TRIM3-215ENST00000639856 ARMCX3Q9UH62 379 aaPredicted RBP16.55■□□□□ 0.24
TRIM3-215ENST00000639856 TELO2Q9Y4R8 837 aa16.55■□□□□ 0.24
TRIM3-215ENST00000639856 WDR81Q562E7 1941 aa16.55■□□□□ 0.24
TRIM3-215ENST00000639856 MYH11P35749 1972 aa16.55■□□□□ 0.24
TRIM3-215ENST00000639856 TMEM150BA6NC51 233 aa16.54■□□□□ 0.24
TRIM3-215ENST00000639856 LDLRAD1Q5T700 205 aa16.54■□□□□ 0.24
TRIM3-215ENST00000639856 TRMT1LQ7Z2T5 733 aaKnown RBP16.54■□□□□ 0.24
TRIM3-215ENST00000639856 NCAPG2Q86XI2 1143 aa16.54■□□□□ 0.24
TRIM3-215ENST00000639856 NEK9Q8TD19 979 aa16.54■□□□□ 0.24
TRIM3-215ENST00000639856 HNRNPLLQ8WVV9 542 aaKnown RBP16.54■□□□□ 0.24
TRIM3-215ENST00000639856 GPRASP2Q96D09 838 aa16.54■□□□□ 0.24
TRIM3-215ENST00000639856 SH2D3AQ9BRG2 576 aa16.54■□□□□ 0.24
TRIM3-215ENST00000639856 EIF3DO15371 548 aaKnown RBP eCLIP16.54■□□□□ 0.24
TRIM3-215ENST00000639856 PJA2O43164 708 aa16.54■□□□□ 0.24
TRIM3-215ENST00000639856 SORBS3O60504 671 aa16.54■□□□□ 0.24
TRIM3-215ENST00000639856 TLR2O60603 784 aa16.54■□□□□ 0.24
TRIM3-215ENST00000639856 TACC1O75410 805 aa16.54■□□□□ 0.24
TRIM3-215ENST00000639856 SERPING1P05155 500 aa16.54■□□□□ 0.24
TRIM3-215ENST00000639856 RPL13P26373 211 aaKnown RBP16.54■□□□□ 0.24
TRIM3-215ENST00000639856 MAGEA1P43355 309 aa16.54■□□□□ 0.24
TRIM3-215ENST00000639856 PLA2G4AP47712 749 aa16.54■□□□□ 0.24
TRIM3-215ENST00000639856 GABPB1Q06547 395 aaPredicted RBP16.54■□□□□ 0.24
TRIM3-215ENST00000639856 TDRD12Q587J7 1177 aaKnown RBP16.54■□□□□ 0.24
TRIM3-215ENST00000639856 NOA1Q8NC60 698 aaKnown RBP16.54■□□□□ 0.24
TRIM3-215ENST00000639856 PNKPQ96T60 521 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms