RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 PPP1R12BO60237 982 aaPredicted RBP23.55■■□□□ 1.36
CLN6-224ENST00000638076 MAEAQ7L5Y9 396 aa23.55■■□□□ 1.36
CLN6-224ENST00000638076 RNF10Q8N5U6 811 aaKnown RBP23.55■■□□□ 1.36
CLN6-224ENST00000638076 NOX5Q96PH1 765 aa23.55■■□□□ 1.36
CLN6-224ENST00000638076 AGPAT3Q9NRZ7 376 aa23.55■■□□□ 1.36
CLN6-224ENST00000638076 ERLIN1O75477 346 aa23.55■■□□□ 1.36
CLN6-224ENST00000638076 MYCLP12524 364 aaPredicted RBP23.55■■□□□ 1.36
CLN6-224ENST00000638076 NAP1L1P55209 391 aaKnown RBP23.55■■□□□ 1.36
CLN6-224ENST00000638076 BEND6Q5SZJ8 279 aaPredicted RBP23.55■■□□□ 1.36
CLN6-224ENST00000638076 IRF2BP2Q7Z5L9 587 aa23.55■■□□□ 1.36
CLN6-224ENST00000638076 SAMD3Q8N6K7 520 aa23.55■■□□□ 1.36
CLN6-224ENST00000638076 WNK4Q96J92 1243 aa23.55■■□□□ 1.36
CLN6-224ENST00000638076 SIX2Q9NPC8 291 aa23.55■■□□□ 1.36
CLN6-224ENST00000638076 RNF216Q9NWF9 866 aaPredicted RBP23.55■■□□□ 1.36
CLN6-224ENST00000638076 FZD9O00144 591 aa23.54■■□□□ 1.36
CLN6-224ENST00000638076 VWA5AO00534 786 aa23.54■■□□□ 1.36
CLN6-224ENST00000638076 DCAF15Q66K64 600 aa23.54■■□□□ 1.36
CLN6-224ENST00000638076 NSMFQ6X4W1 530 aa23.54■■□□□ 1.36
CLN6-224ENST00000638076 RNF207Q6ZRF8 634 aa23.54■■□□□ 1.36
CLN6-224ENST00000638076 ZKSCAN4Q969J2 545 aaPredicted RBP23.54■■□□□ 1.36
CLN6-224ENST00000638076 ATG4CQ96DT6 458 aa23.54■■□□□ 1.36
CLN6-224ENST00000638076 RMDN3Q96TC7 470 aa23.54■■□□□ 1.36
CLN6-224ENST00000638076 MKNK1Q9BUB5 465 aa23.54■■□□□ 1.36
CLN6-224ENST00000638076 ABCB6Q9NP58 842 aa23.54■■□□□ 1.36
CLN6-224ENST00000638076 GTPBP10A4D1E9 387 aaKnown RBP23.54■■□□□ 1.36
CLN6-224ENST00000638076 CYP2J2P51589 502 aa23.54■■□□□ 1.36
CLN6-224ENST00000638076 BACE1P56817 501 aa23.54■■□□□ 1.36
CLN6-224ENST00000638076 PTK2Q05397 1052 aa23.54■■□□□ 1.36
CLN6-224ENST00000638076 CREG2Q8IUH2 290 aa23.54■■□□□ 1.36
CLN6-224ENST00000638076 SCYL3Q8IZE3 742 aa23.54■■□□□ 1.36
CLN6-224ENST00000638076 STRA6Q9BX79 667 aa23.54■■□□□ 1.36
CLN6-224ENST00000638076 TBC1D22BQ9NU19 505 aa23.54■■□□□ 1.36
CLN6-224ENST00000638076 FBXL5Q9UKA1 691 aa23.54■■□□□ 1.36
CLN6-224ENST00000638076 UTRNP46939 3433 aa23.54■■□□□ 1.36
CLN6-224ENST00000638076 TUBBP07437 444 aa23.53■■□□□ 1.36
CLN6-224ENST00000638076 PRLRP16471 622 aa23.53■■□□□ 1.36
CLN6-224ENST00000638076 QARSP47897 775 aaKnown RBP23.53■■□□□ 1.36
CLN6-224ENST00000638076 GABPB1Q06547 395 aaPredicted RBP23.53■■□□□ 1.36
CLN6-224ENST00000638076 PLS1Q14651 629 aa23.53■■□□□ 1.36
CLN6-224ENST00000638076 PRAMEF18Q5VWM3 479 aa23.53■■□□□ 1.36
CLN6-224ENST00000638076 RBM46Q8TBY0 533 aaKnown RBP23.53■■□□□ 1.36
CLN6-224ENST00000638076 DMAC2Q9NW81 257 aa23.53■■□□□ 1.36
CLN6-224ENST00000638076 AJAP1Q9UKB5 411 aaPredicted RBP23.53■■□□□ 1.36
CLN6-224ENST00000638076 K7ENM7 598 aa23.53■■□□□ 1.36
CLN6-224ENST00000638076 PPP1R37O75864 691 aa23.53■■□□□ 1.36
CLN6-224ENST00000638076 RARRES1P49788 294 aa23.53■■□□□ 1.36
CLN6-224ENST00000638076 NFRKBQ6P4R8 1299 aa23.53■■□□□ 1.36
CLN6-224ENST00000638076 SYCP3Q8IZU3 236 aa23.53■■□□□ 1.36
CLN6-224ENST00000638076 COG1Q8WTW3 980 aa23.53■■□□□ 1.36
CLN6-224ENST00000638076 PDCD2LQ9BRP1 358 aa23.53■■□□□ 1.36
CLN6-224ENST00000638076 PXMP2Q9NR77 195 aa23.53■■□□□ 1.36
CLN6-224ENST00000638076 DBR1Q9UK59 544 aaKnown RBP23.53■■□□□ 1.36
CLN6-224ENST00000638076 PNMA2Q9UL42 364 aa23.53■■□□□ 1.36
CLN6-224ENST00000638076 FZD1Q9UP38 647 aa23.53■■□□□ 1.36
CLN6-224ENST00000638076 FRMD4BQ9Y2L6 1034 aa23.53■■□□□ 1.36
CLN6-224ENST00000638076 RIPK3Q9Y572 518 aa23.53■■□□□ 1.36
CLN6-224ENST00000638076 LOXHD1Q8IVV2 1947 aa23.52■■□□□ 1.36
CLN6-224ENST00000638076 WDR93Q6P2C0 686 aa23.52■■□□□ 1.36
CLN6-224ENST00000638076 ZNF571Q7Z3V5 609 aaPredicted RBP23.52■■□□□ 1.36
CLN6-224ENST00000638076 WRNIP1Q96S55 665 aa23.52■■□□□ 1.36
CLN6-224ENST00000638076 OSBPL9Q96SU4 736 aa23.52■■□□□ 1.36
CLN6-224ENST00000638076 LARSQ9P2J5 1176 aaKnown RBP23.52■■□□□ 1.36
CLN6-224ENST00000638076 BZW2Q9Y6E2 419 aaKnown RBP23.52■■□□□ 1.36
CLN6-224ENST00000638076 LTBP3Q9NS15 1303 aa23.52■■□□□ 1.36
CLN6-224ENST00000638076 ATP9AO75110 1047 aa23.51■■□□□ 1.35
CLN6-224ENST00000638076 FDX1P10109 184 aa23.51■■□□□ 1.35
CLN6-224ENST00000638076 KLRC1P26715 233 aa23.51■■□□□ 1.35
CLN6-224ENST00000638076 NAB2Q15742 525 aa23.51■■□□□ 1.35
CLN6-224ENST00000638076 ARHGEF16Q5VV41 709 aa23.51■■□□□ 1.35
CLN6-224ENST00000638076 SH2D3AQ9BRG2 576 aa23.51■■□□□ 1.35
CLN6-224ENST00000638076 PACSIN1Q9BY11 444 aa23.51■■□□□ 1.35
CLN6-224ENST00000638076 HYOU1Q9Y4L1 999 aa23.51■■□□□ 1.35
CLN6-224ENST00000638076 MYH10P35580 1976 aa23.51■■□□□ 1.35
CLN6-224ENST00000638076 MYH11P35749 1972 aa23.51■■□□□ 1.35
CLN6-224ENST00000638076 NCK2O43639 380 aa23.51■■□□□ 1.35
CLN6-224ENST00000638076 PTPRAP18433 802 aa23.51■■□□□ 1.35
CLN6-224ENST00000638076 KIAA0753Q2KHM9 967 aa23.51■■□□□ 1.35
CLN6-224ENST00000638076 GJB7Q6PEY0 223 aa23.51■■□□□ 1.35
CLN6-224ENST00000638076 ZNF280CQ8ND82 737 aa23.51■■□□□ 1.35
CLN6-224ENST00000638076 GOLGA5Q8TBA6 731 aa23.51■■□□□ 1.35
CLN6-224ENST00000638076 PSMB7Q99436 277 aa23.51■■□□□ 1.35
CLN6-224ENST00000638076 AS3MTQ9HBK9 375 aa23.51■■□□□ 1.35
CLN6-224ENST00000638076 RNF146Q9NTX7 359 aa23.51■■□□□ 1.35
CLN6-224ENST00000638076 ZNF112Q9UJU3 913 aa23.51■■□□□ 1.35
CLN6-224ENST00000638076 TESPA1A2RU30 521 aaPredicted RBP23.5■■□□□ 1.35
CLN6-224ENST00000638076 MAP2K7O14733 419 aa23.5■■□□□ 1.35
CLN6-224ENST00000638076 TCP1P17987 556 aaKnown RBP23.5■■□□□ 1.35
CLN6-224ENST00000638076 YWHABP31946 246 aaKnown RBP23.5■■□□□ 1.35
CLN6-224ENST00000638076 FMO5P49326 533 aa23.5■■□□□ 1.35
CLN6-224ENST00000638076 JAM2P57087 298 aa23.5■■□□□ 1.35
CLN6-224ENST00000638076 ANGEL2Q5VTE6 544 aaKnown RBP23.5■■□□□ 1.35
CLN6-224ENST00000638076 PICK1Q9NRD5 415 aa23.5■■□□□ 1.35
CLN6-224ENST00000638076 LYPLA2O95372 231 aa23.5■■□□□ 1.35
CLN6-224ENST00000638076 CXCR5P32302 372 aa23.5■■□□□ 1.35
CLN6-224ENST00000638076 C2orf54Q08AI8 447 aa23.5■■□□□ 1.35
CLN6-224ENST00000638076 BAATQ14032 418 aaPredicted RBP23.5■■□□□ 1.35
CLN6-224ENST00000638076 UGCGQ16739 394 aa23.5■■□□□ 1.35
CLN6-224ENST00000638076 IQCEQ6IPM2 695 aa23.5■■□□□ 1.35
CLN6-224ENST00000638076 TRMT1LQ7Z2T5 733 aaKnown RBP23.5■■□□□ 1.35
CLN6-224ENST00000638076 TLR10Q9BXR5 811 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms