RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 KIF28PB7ZC32 967 aa17.45■□□□□ 0.38
CACNA1A-258ENST00000638029 MT-ND3P03897 115 aa17.45■□□□□ 0.38
CACNA1A-258ENST00000638029 AP1B1Q10567 949 aa17.45■□□□□ 0.38
CACNA1A-258ENST00000638029 IFNL3Q8IZI9 196 aa17.45■□□□□ 0.38
CACNA1A-258ENST00000638029 FLAD1Q8NFF5 587 aa17.45■□□□□ 0.38
CACNA1A-258ENST00000638029 PCDHA5Q9Y5H7 936 aa17.45■□□□□ 0.38
CACNA1A-258ENST00000638029 NEURL1BA8MQ27 555 aa17.45■□□□□ 0.38
CACNA1A-258ENST00000638029 HSPA4LO95757 839 aa17.45■□□□□ 0.38
CACNA1A-258ENST00000638029 PLTPP55058 493 aa17.45■□□□□ 0.38
CACNA1A-258ENST00000638029 MFAP3P55082 362 aa17.45■□□□□ 0.38
CACNA1A-258ENST00000638029 ZMYM3Q14202 1370 aa17.45■□□□□ 0.38
CACNA1A-258ENST00000638029 EXOC3L4Q17RC7 722 aa17.45■□□□□ 0.38
CACNA1A-258ENST00000638029 SDE2Q6IQ49 451 aa17.45■□□□□ 0.38
CACNA1A-258ENST00000638029 EIF3CQ99613 913 aaKnown RBP17.45■□□□□ 0.38
CACNA1A-258ENST00000638029 SATB2Q9UPW6 733 aa17.45■□□□□ 0.38
CACNA1A-258ENST00000638029 USP19O94966 1318 aa17.45■□□□□ 0.38
CACNA1A-258ENST00000638029 ARHGEF37A1IGU5 675 aa17.45■□□□□ 0.38
CACNA1A-258ENST00000638029 FOSL2P15408 326 aa17.45■□□□□ 0.38
CACNA1A-258ENST00000638029 SLC16A1P53985 500 aa17.45■□□□□ 0.38
CACNA1A-258ENST00000638029 ST13P4Q8IZP2 240 aaPredicted RBP17.45■□□□□ 0.38
CACNA1A-258ENST00000638029 UPF3AQ9H1J1 476 aaKnown RBP17.45■□□□□ 0.38
CACNA1A-258ENST00000638029 P4HA2O15460 535 aa17.45■□□□□ 0.38
CACNA1A-258ENST00000638029 HOXA13P31271 388 aaPredicted RBP17.45■□□□□ 0.38
CACNA1A-258ENST00000638029 CEP78Q5JTW2 689 aa17.45■□□□□ 0.38
CACNA1A-258ENST00000638029 MEI1Q5TIA1 1274 aa17.45■□□□□ 0.38
CACNA1A-258ENST00000638029 MARCH10Q8NA82 808 aaPredicted RBP17.45■□□□□ 0.38
CACNA1A-258ENST00000638029 USP28Q96RU2 1077 aa17.45■□□□□ 0.38
CACNA1A-258ENST00000638029 GRIK1P39086 918 aa17.45■□□□□ 0.38
CACNA1A-258ENST00000638029 DNAJC24Q6P3W2 148 aa17.45■□□□□ 0.38
CACNA1A-258ENST00000638029 SIK2Q9H0K1 926 aa17.45■□□□□ 0.38
CACNA1A-258ENST00000638029 KLHL8Q9P2G9 620 aaPredicted RBP17.45■□□□□ 0.38
CACNA1A-258ENST00000638029 KCNH4Q9UQ05 1017 aa17.45■□□□□ 0.38
CACNA1A-258ENST00000638029 HSPA8P11142 646 aaKnown RBP17.44■□□□□ 0.38
CACNA1A-258ENST00000638029 DMTNQ08495 405 aa17.44■□□□□ 0.38
CACNA1A-258ENST00000638029 TOMM20Q15388 145 aa17.44■□□□□ 0.38
CACNA1A-258ENST00000638029 FAF2Q96CS3 445 aa17.44■□□□□ 0.38
CACNA1A-258ENST00000638029 CCDC51Q96ER9 411 aa17.44■□□□□ 0.38
CACNA1A-258ENST00000638029 SCUBE2Q9NQ36 999 aa17.44■□□□□ 0.38
CACNA1A-258ENST00000638029 RALGDSQ12967 914 aa17.44■□□□□ 0.38
CACNA1A-258ENST00000638029 C10orf53Q8N6V4 93 aa17.44■□□□□ 0.38
CACNA1A-258ENST00000638029 CNKSR1Q969H4 720 aa17.44■□□□□ 0.38
CACNA1A-258ENST00000638029 OCA2Q04671 838 aa17.44■□□□□ 0.38
CACNA1A-258ENST00000638029 AOC3Q16853 763 aa17.44■□□□□ 0.38
CACNA1A-258ENST00000638029 HS6ST3Q8IZP7 471 aa17.44■□□□□ 0.38
CACNA1A-258ENST00000638029 NGRNQ9NPE2 291 aaKnown RBP17.44■□□□□ 0.38
CACNA1A-258ENST00000638029 KIAA1468Q9P260 1216 aa17.44■□□□□ 0.38
CACNA1A-258ENST00000638029 TTI1O43156 1089 aa17.44■□□□□ 0.38
CACNA1A-258ENST00000638029 PDCLQ13371 301 aa17.44■□□□□ 0.38
CACNA1A-258ENST00000638029 C16orf72Q14CZ0 275 aa17.44■□□□□ 0.38
CACNA1A-258ENST00000638029 ARMC6Q6NXE6 501 aa17.44■□□□□ 0.38
CACNA1A-258ENST00000638029 SKAP2O75563 359 aaPredicted RBP17.44■□□□□ 0.38
CACNA1A-258ENST00000638029 CAPN1P07384 714 aa17.44■□□□□ 0.38
CACNA1A-258ENST00000638029 TTC17Q96AE7 1141 aa17.44■□□□□ 0.38
CACNA1A-258ENST00000638029 NT5C1BQ96P26 610 aa17.44■□□□□ 0.38
CACNA1A-258ENST00000638029 TESK2Q96S53 571 aa17.44■□□□□ 0.38
CACNA1A-258ENST00000638029 PPARGC1AQ9UBK2 798 aaKnown RBP17.44■□□□□ 0.38
CACNA1A-258ENST00000638029 DBNLQ9UJU6 430 aaKnown RBP17.44■□□□□ 0.38
CACNA1A-258ENST00000638029 MAP3K13O43283 966 aa17.43■□□□□ 0.38
CACNA1A-258ENST00000638029 GALNT17Q6IS24 598 aa17.43■□□□□ 0.38
CACNA1A-258ENST00000638029 RUBCNLQ9H714 662 aa17.43■□□□□ 0.38
CACNA1A-258ENST00000638029 SUN2Q9UH99 717 aa17.43■□□□□ 0.38
CACNA1A-258ENST00000638029 UGGT2Q9NYU1 1516 aa17.43■□□□□ 0.38
CACNA1A-258ENST00000638029 TFRCP02786 760 aaKnown RBP17.43■□□□□ 0.38
CACNA1A-258ENST00000638029 CCDC15Q0P6D6 951 aa17.43■□□□□ 0.38
CACNA1A-258ENST00000638029 LRRC41Q15345 812 aa17.43■□□□□ 0.38
CACNA1A-258ENST00000638029 PDXDC1Q6P996 788 aa17.43■□□□□ 0.38
CACNA1A-258ENST00000638029 HMBSP08397 361 aa17.43■□□□□ 0.38
CACNA1A-258ENST00000638029 DDIASQ8IXT1 998 aa17.43■□□□□ 0.38
CACNA1A-258ENST00000638029 SLFN14P0C7P3 912 aa17.43■□□□□ 0.38
CACNA1A-258ENST00000638029 SCG2P13521 617 aa17.43■□□□□ 0.38
CACNA1A-258ENST00000638029 MAP4P27816 1152 aaKnown RBP17.43■□□□□ 0.38
CACNA1A-258ENST00000638029 PTGDRQ13258 359 aa17.43■□□□□ 0.38
CACNA1A-258ENST00000638029 FAM47EQ6ZV65 393 aa17.43■□□□□ 0.38
CACNA1A-258ENST00000638029 TRIM48Q8IWZ4 208 aa17.43■□□□□ 0.38
CACNA1A-258ENST00000638029 ZBTB38Q8NAP3 1195 aaPredicted RBP17.43■□□□□ 0.38
CACNA1A-258ENST00000638029 BCL2L14Q9BZR8 327 aa17.43■□□□□ 0.38
CACNA1A-258ENST00000638029 MCM8Q9UJA3 840 aa17.43■□□□□ 0.38
CACNA1A-258ENST00000638029 KRT8P05787 483 aa17.43■□□□□ 0.38
CACNA1A-258ENST00000638029 GSNP06396 782 aa17.43■□□□□ 0.38
CACNA1A-258ENST00000638029 GUCY2CP25092 1073 aa17.43■□□□□ 0.38
CACNA1A-258ENST00000638029 RUNDC3BQ96NL0 473 aa17.43■□□□□ 0.38
CACNA1A-258ENST00000638029 ORAI2Q96SN7 254 aa17.43■□□□□ 0.38
CACNA1A-258ENST00000638029 RERGLQ9H628 205 aa17.43■□□□□ 0.38
CACNA1A-258ENST00000638029 MDH1BQ5I0G3 518 aa17.43■□□□□ 0.38
CACNA1A-258ENST00000638029 ZMYM4Q5VZL5 1548 aa17.42■□□□□ 0.38
CACNA1A-258ENST00000638029 PRRG1O14668 218 aa17.42■□□□□ 0.38
CACNA1A-258ENST00000638029 MRPS25P82663 173 aaKnown RBP17.42■□□□□ 0.38
CACNA1A-258ENST00000638029 GRIN1Q05586 938 aa17.42■□□□□ 0.38
CACNA1A-258ENST00000638029 ME3Q16798 604 aa17.42■□□□□ 0.38
CACNA1A-258ENST00000638029 DCUN1D1Q96GG9 259 aa17.42■□□□□ 0.38
CACNA1A-258ENST00000638029 H0Y3Z8 333 aa17.42■□□□□ 0.38
CACNA1A-258ENST00000638029 SEC31AO94979 1220 aaKnown RBP17.42■□□□□ 0.38
CACNA1A-258ENST00000638029 HOXB7P09629 217 aa17.42■□□□□ 0.38
CACNA1A-258ENST00000638029 PHKG1Q16816 387 aa17.42■□□□□ 0.38
CACNA1A-258ENST00000638029 E4F1Q66K89 784 aaPredicted RBP17.42■□□□□ 0.38
CACNA1A-258ENST00000638029 RCSD1Q6JBY9 416 aa17.42■□□□□ 0.38
CACNA1A-258ENST00000638029 MFN1Q8IWA4 741 aa17.42■□□□□ 0.38
CACNA1A-258ENST00000638029 PPP2R3CQ969Q6 453 aa17.42■□□□□ 0.38
CACNA1A-258ENST00000638029 GFPT2O94808 682 aa17.42■□□□□ 0.38
CACNA1A-258ENST00000638029 ACSL3O95573 720 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms